RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 CREBZFQ9NS37 354 aa5.16□□□□□ -1.58
SCARNA4.1-201ENST00000628597 NEXMIFQ5QGS0 1516 aa5.16□□□□□ -1.58
SCARNA4.1-201ENST00000628597 COL22A1Q8NFW1 1626 aaPredicted RBP5.15□□□□□ -1.58
SCARNA4.1-201ENST00000628597 PLEKHH2Q8IVE3 1493 aa5.15□□□□□ -1.58
SCARNA4.1-201ENST00000628597 USP35Q9P2H5 1018 aa5.15□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CD2APQ9Y5K6 639 aa5.15□□□□□ -1.59
SCARNA4.1-201ENST00000628597 MTUS2Q5JR59 1369 aa5.15□□□□□ -1.59
SCARNA4.1-201ENST00000628597 ADGRB3O60242 1522 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 TULP4Q9NRJ4 1543 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 COL9A1P20849 921 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 DGKZQ13574 1117 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PRDM6Q9NQX0 595 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 SPATA31A3Q5VYP0 1347 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PRAG1Q86YV5 1406 aa5.14□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CHD2O14647 1828 aaKnown RBP5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 VEGFBP49765 207 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PSME1Q06323 249 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 SLC52A1Q9NWF4 448 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 SPATA31A1Q5TZJ5 1347 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PCNTO95613 3336 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 ADGRL2O95490 1459 aa5.13□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PLA2G5P39877 138 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 EVA1CP58658 441 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 KRT28Q7Z3Y7 464 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CNKSR2Q8WXI2 1034 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 STRN4Q9NRL3 753 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CNTNAP1P78357 1384 aa5.12□□□□□ -1.59
SCARNA4.1-201ENST00000628597 BARGINQ6ZT62 677 aa5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 ARHGAP27Q6ZUM4 889 aa5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 COL25A1Q9BXS0 654 aaPredicted RBP5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 KIF15Q9NS87 1388 aa5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 RIMS2Q9UQ26 1411 aa5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 INO80Q9ULG1 1556 aaPredicted RBP5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CDC42BPBQ9Y5S2 1711 aa5.11□□□□□ -1.59
SCARNA4.1-201ENST00000628597 CROCC2H7BZ55 1655 aa5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 TRPM2O94759 1503 aa5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 TSPY4P0CV99 314 aa5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 TSPY10P0CW01 314 aa5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 VEGFAP15692 232 aaPredicted RBP5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 IGSF1Q8N6C5 1336 aa5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 MARF1Q9Y4F3 1742 aaKnown RBP5.1□□□□□ -1.59
SCARNA4.1-201ENST00000628597 ARHGEF28Q8N1W1 1705 aaKnown RBP5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 EHBP1L1Q8N3D4 1523 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 C10orf71Q711Q0 1435 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 ADAMTS13Q76LX8 1427 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PLEKHG2Q9H7P9 1386 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 HOXD11P31277 338 aaPredicted RBP5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 RSPH4AQ5TD94 716 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 C9orf131Q5VYM1 1079 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PRDM11Q9NQV5 511 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 TFCP2L1Q9NZI6 479 aa5.09□□□□□ -1.59
SCARNA4.1-201ENST00000628597 PIK3C2BO00750 1634 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 USP32Q8NFA0 1604 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 ARHGAP31Q2M1Z3 1444 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PTPRUQ92729 1446 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 RRBP1Q9P2E9 1410 aaKnown RBP5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PPEF1O14829 653 aaPredicted RBP5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 TCP11L2Q8N4U5 519 aa5.08□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PXDNQ92626 1479 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 OVOS2A0A0G2JMS6 1433 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 OVOS2A0A0J9YW53 1432 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 OVOS2Q6IE36 1432 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 DEFB115Q30KQ5 88 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PTF1AQ7RTS3 328 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 LAMC1P11047 1609 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PTPN23Q9H3S7 1636 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PXDNLA1KZ92 1463 aa5.07□□□□□ -1.6
SCARNA4.1-201ENST00000628597 NWD2Q9ULI1 1742 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 NUTM2FA1L443 756 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 TMEM88BA6NKF7 163 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 ZNF827Q17R98 1081 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 TSKSQ9UJT2 592 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 BCS1LQ9Y276 419 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 ZFYVE9O95405 1425 aa5.06□□□□□ -1.6
SCARNA4.1-201ENST00000628597 THSD7AQ9UPZ6 1657 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 ARHGEF10O15013 1369 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CFAP65Q6ZU64 1925 aaKnown RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CCNB3Q8WWL7 1395 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 WDR33Q9C0J8 1336 aaKnown RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CA12O43570 354 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 DDB1Q16531 1140 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 HIRIP3Q9BW71 556 aaPredicted RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 COLQQ9Y215 455 aaPredicted RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 THRAP3Q9Y2W1 955 aaKnown RBP5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 KCPQ6ZWJ8 1503 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CCDC144AA2RUR9 1427 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CACNA1GO43497 2377 aa5.05□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PNPLA7Q6ZV29 1317 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 MSL1Q68DK7 614 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 CHADLQ6NUI6 762 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PAXIP1Q6ZW49 1069 aaPredicted RBP5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 COL26A1Q96A83 441 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 IGSF5Q9NSI5 407 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 RNF181Q9P0P0 153 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 PRXQ9BXM0 1461 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 TECPR2O15040 1411 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 KANK1Q14678 1352 aa5.04□□□□□ -1.6
SCARNA4.1-201ENST00000628597 SUPT5HO00267 1087 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms