RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FRMPD1Q5SYB0 1578 aa15.71■□□□□ 0.11
LITAF-221ENST00000622633 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
LITAF-221ENST00000622633 EVC2Q86UK5 1308 aa15.71■□□□□ 0.11
LITAF-221ENST00000622633 SHPRHQ149N8 1683 aa15.71■□□□□ 0.11
LITAF-221ENST00000622633 RAPGEF3O95398 923 aa15.71■□□□□ 0.1
LITAF-221ENST00000622633 SECISBP2LQ93073 1101 aaKnown RBP15.71■□□□□ 0.1
LITAF-221ENST00000622633 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
LITAF-221ENST00000622633 RLBP1P12271 317 aa15.7■□□□□ 0.1
LITAF-221ENST00000622633 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.1
LITAF-221ENST00000622633 NINLQ9Y2I6 1382 aa15.7■□□□□ 0.1
LITAF-221ENST00000622633 PPLO60437 1756 aa15.7■□□□□ 0.1
LITAF-221ENST00000622633 MLH3Q9UHC1 1453 aa15.7■□□□□ 0.1
LITAF-221ENST00000622633 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
LITAF-221ENST00000622633 GOLGA6L3A6NEY3 463 aa15.69■□□□□ 0.1
LITAF-221ENST00000622633 STK26Q9P289 416 aa15.69■□□□□ 0.1
LITAF-221ENST00000622633 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
LITAF-221ENST00000622633 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
LITAF-221ENST00000622633 ZC3H13Q5T200 1668 aaKnown RBP15.68■□□□□ 0.1
LITAF-221ENST00000622633 ABCC3O15438 1527 aa15.68■□□□□ 0.1
LITAF-221ENST00000622633 SEC24BO95487 1268 aa15.68■□□□□ 0.1
LITAF-221ENST00000622633 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
LITAF-221ENST00000622633 USP19O94966 1318 aa15.66■□□□□ 0.1
LITAF-221ENST00000622633 MAPK8IP3Q9UPT6 1336 aa15.66■□□□□ 0.1
LITAF-221ENST00000622633 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
LITAF-221ENST00000622633 ZSCAN20P17040 1043 aaPredicted RBP15.66■□□□□ 0.1
LITAF-221ENST00000622633 IDI1Q13907 227 aa15.66■□□□□ 0.1
LITAF-221ENST00000622633 PUS7Q96PZ0 661 aaKnown RBP15.66■□□□□ 0.1
LITAF-221ENST00000622633 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
LITAF-221ENST00000622633 PMFBP1Q8TBY8 1022 aa15.65■□□□□ 0.1
LITAF-221ENST00000622633 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
LITAF-221ENST00000622633 TULP4Q9NRJ4 1543 aa15.65■□□□□ 0.1
LITAF-221ENST00000622633 GLI2P10070 1586 aa15.64■□□□□ 0.09
LITAF-221ENST00000622633 HECW2Q9P2P5 1572 aa15.64■□□□□ 0.09
LITAF-221ENST00000622633 SRPK2P78362 688 aaKnown RBP15.64■□□□□ 0.09
LITAF-221ENST00000622633 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
LITAF-221ENST00000622633 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
LITAF-221ENST00000622633 ANP32BQ92688 251 aaKnown RBP15.63■□□□□ 0.09
LITAF-221ENST00000622633 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
LITAF-221ENST00000622633 PDZRN3Q9UPQ7 1066 aa15.62■□□□□ 0.09
LITAF-221ENST00000622633 USP32Q8NFA0 1604 aa15.62■□□□□ 0.09
LITAF-221ENST00000622633 NSD2O96028 1365 aa15.62■□□□□ 0.09
LITAF-221ENST00000622633 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
LITAF-221ENST00000622633 SIGLEC1Q9BZZ2 1709 aa15.62■□□□□ 0.09
LITAF-221ENST00000622633 TERF1P54274 439 aa15.61■□□□□ 0.09
LITAF-221ENST00000622633 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
LITAF-221ENST00000622633 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
LITAF-221ENST00000622633 A0A1W2PP64 1363 aa15.61■□□□□ 0.09
LITAF-221ENST00000622633 CAMSAP1Q5T5Y3 1602 aa15.6■□□□□ 0.09
LITAF-221ENST00000622633 CFAP74Q9C0B2 1584 aa15.6■□□□□ 0.09
LITAF-221ENST00000622633 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
LITAF-221ENST00000622633 RWDD1Q9H446 243 aaPredicted RBP15.6■□□□□ 0.09
LITAF-221ENST00000622633 KIF20AO95235 890 aa15.59■□□□□ 0.09
LITAF-221ENST00000622633 ZKSCAN2Q63HK3 967 aa15.59■□□□□ 0.09
LITAF-221ENST00000622633 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
LITAF-221ENST00000622633 MVPQ14764 893 aaKnown RBP15.59■□□□□ 0.09
LITAF-221ENST00000622633 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
LITAF-221ENST00000622633 ARHGEF28Q8N1W1 1705 aaKnown RBP15.58■□□□□ 0.09
LITAF-221ENST00000622633 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.09
LITAF-221ENST00000622633 DZIP1LQ8IYY4 767 aaKnown RBP15.58■□□□□ 0.08
LITAF-221ENST00000622633 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
LITAF-221ENST00000622633 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.08
LITAF-221ENST00000622633 FYB1O15117 783 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 OFD1O75665 1012 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 ARID3AQ99856 593 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 ABCC11Q96J66 1382 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 MRE11P49959 708 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 PIK3C2BO00750 1634 aa15.57■□□□□ 0.08
LITAF-221ENST00000622633 MTERF4Q7Z6M4 381 aaKnown RBP15.56■□□□□ 0.08
LITAF-221ENST00000622633 TERF2IPQ9NYB0 399 aa15.56■□□□□ 0.08
LITAF-221ENST00000622633 SSH1Q8WYL5 1049 aa15.55■□□□□ 0.08
LITAF-221ENST00000622633 ARHGAP31Q2M1Z3 1444 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 BECN1Q14457 450 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
LITAF-221ENST00000622633 ZFYVE9O95405 1425 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 CT47B1P0C2W7 299 aaPredicted RBP15.54■□□□□ 0.08
LITAF-221ENST00000622633 TRIM27P14373 513 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 NEO1Q92859 1461 aa15.54■□□□□ 0.08
LITAF-221ENST00000622633 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
LITAF-221ENST00000622633 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
LITAF-221ENST00000622633 UPF2Q9HAU5 1272 aaKnown RBP15.53■□□□□ 0.08
LITAF-221ENST00000622633 ADGRB2O60241 1585 aa15.53■□□□□ 0.08
LITAF-221ENST00000622633 YEATS2Q9ULM3 1422 aa15.53■□□□□ 0.08
LITAF-221ENST00000622633 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
LITAF-221ENST00000622633 GTPBP4Q9BZE4 634 aaKnown RBP15.53■□□□□ 0.08
LITAF-221ENST00000622633 NOB1Q9ULX3 412 aaKnown RBP15.53■□□□□ 0.08
LITAF-221ENST00000622633 ZBTB22O15209 634 aa15.52■□□□□ 0.08
LITAF-221ENST00000622633 ITPRIPQ8IWB1 547 aa15.52■□□□□ 0.08
LITAF-221ENST00000622633 TRIM44Q96DX7 344 aaPredicted RBP15.52■□□□□ 0.08
LITAF-221ENST00000622633 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
LITAF-221ENST00000622633 SLKQ9H2G2 1235 aaPredicted RBP15.52■□□□□ 0.08
LITAF-221ENST00000622633 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
LITAF-221ENST00000622633 VIRMAQ69YN4 1812 aaKnown RBP15.52■□□□□ 0.07
LITAF-221ENST00000622633 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.07
LITAF-221ENST00000622633 TBC1D32Q96NH3 1257 aa15.52■□□□□ 0.07
LITAF-221ENST00000622633 CABP1Q9NZU7 370 aa15.52■□□□□ 0.07
LITAF-221ENST00000622633 COL3A1P02461 1466 aaPredicted RBP15.51■□□□□ 0.07
LITAF-221ENST00000622633 ATF7IPQ6VMQ6 1270 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms