RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 CRBNQ96SW2 442 aa22.64■■□□□ 1.21
TRA2A-212ENST00000621813 TECPR2O15040 1411 aa22.64■■□□□ 1.21
TRA2A-212ENST00000621813 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
TRA2A-212ENST00000621813 ADGRB2O60241 1585 aa22.64■■□□□ 1.21
TRA2A-212ENST00000621813 CPS1P31327 1500 aa22.63■■□□□ 1.21
TRA2A-212ENST00000621813 FYB1O15117 783 aa22.62■■□□□ 1.21
TRA2A-212ENST00000621813 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
TRA2A-212ENST00000621813 WDR63Q8IWG1 891 aa22.61■■□□□ 1.21
TRA2A-212ENST00000621813 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
TRA2A-212ENST00000621813 SPINK5Q9NQ38 1064 aaPredicted RBP22.61■■□□□ 1.21
TRA2A-212ENST00000621813 FGD1P98174 961 aa22.61■■□□□ 1.21
TRA2A-212ENST00000621813 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
TRA2A-212ENST00000621813 TMEM2Q9UHN6 1383 aa22.6■■□□□ 1.21
TRA2A-212ENST00000621813 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
TRA2A-212ENST00000621813 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
TRA2A-212ENST00000621813 METP08581 1390 aa22.59■■□□□ 1.21
TRA2A-212ENST00000621813 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
TRA2A-212ENST00000621813 TCERG1O14776 1098 aaKnown RBP22.57■■□□□ 1.2
TRA2A-212ENST00000621813 AAMPQ13685 434 aa22.57■■□□□ 1.2
TRA2A-212ENST00000621813 U2AF1L5P0DN76 240 aaPredicted RBP22.57■■□□□ 1.2
TRA2A-212ENST00000621813 U2AF1Q01081 240 aaKnown RBP eCLIP22.57■■□□□ 1.21e-7■■■□□ 15.2
TRA2A-212ENST00000621813 HSP90AA1P07900 732 aaKnown RBP22.56■■□□□ 1.2
TRA2A-212ENST00000621813 LAS1LQ9Y4W2 734 aaKnown RBP22.56■■□□□ 1.2
TRA2A-212ENST00000621813 WASLO00401 505 aaPredicted RBP22.55■■□□□ 1.2
TRA2A-212ENST00000621813 PDE4CQ08493 712 aa22.55■■□□□ 1.2
TRA2A-212ENST00000621813 C20orf194Q5TEA3 1177 aa22.55■■□□□ 1.2
TRA2A-212ENST00000621813 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
TRA2A-212ENST00000621813 PNPLA6Q8IY17 1366 aa22.55■■□□□ 1.2
TRA2A-212ENST00000621813 DMRT2Q9Y5R5 561 aa22.55■■□□□ 1.2
TRA2A-212ENST00000621813 RBM10P98175 930 aaKnown RBP22.54■■□□□ 1.2
TRA2A-212ENST00000621813 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
TRA2A-212ENST00000621813 EDC4Q6P2E9 1401 aaKnown RBP22.54■■□□□ 1.2
TRA2A-212ENST00000621813 CDC42BPGQ6DT37 1551 aa22.54■■□□□ 1.2
TRA2A-212ENST00000621813 MON2Q7Z3U7 1717 aa22.53■■□□□ 1.2
TRA2A-212ENST00000621813 PNNQ9H307 717 aaKnown RBP22.53■■□□□ 1.2
TRA2A-212ENST00000621813 MS4A1P11836 297 aa22.52■■□□□ 1.2
TRA2A-212ENST00000621813 ITSN1Q15811 1721 aa22.52■■□□□ 1.2
TRA2A-212ENST00000621813 PPIP5K1Q6PFW1 1433 aa22.52■■□□□ 1.2
TRA2A-212ENST00000621813 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.19
TRA2A-212ENST00000621813 AKAP12Q02952 1782 aa22.51■■□□□ 1.19
TRA2A-212ENST00000621813 NEUROD2Q15784 382 aa22.51■■□□□ 1.19
TRA2A-212ENST00000621813 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
TRA2A-212ENST00000621813 C3P01024 1663 aa22.51■■□□□ 1.19
TRA2A-212ENST00000621813 PDE3AQ14432 1141 aa22.5■■□□□ 1.19
TRA2A-212ENST00000621813 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
TRA2A-212ENST00000621813 RRP7AQ9Y3A4 280 aaKnown RBP22.5■■□□□ 1.19
TRA2A-212ENST00000621813 TXNDC2Q86VQ3 553 aa22.49■■□□□ 1.19
TRA2A-212ENST00000621813 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
TRA2A-212ENST00000621813 FER1L4A9Z1Z3 1794 aa22.49■■□□□ 1.19
TRA2A-212ENST00000621813 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
TRA2A-212ENST00000621813 CENPQQ7L2Z9 268 aaPredicted RBP22.49■■□□□ 1.19
TRA2A-212ENST00000621813 MAP2P11137 1827 aaKnown RBP22.48■■□□□ 1.19
TRA2A-212ENST00000621813 PLEKHF1Q96S99 279 aa22.48■■□□□ 1.19
TRA2A-212ENST00000621813 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
TRA2A-212ENST00000621813 BCAR3O75815 825 aa22.47■■□□□ 1.19
TRA2A-212ENST00000621813 KDM2BQ8NHM5 1336 aa22.47■■□□□ 1.19
TRA2A-212ENST00000621813 MAPK8IP3Q9UPT6 1336 aa22.47■■□□□ 1.19
TRA2A-212ENST00000621813 CCDC61Q9Y6R9 512 aa22.47■■□□□ 1.19
TRA2A-212ENST00000621813 SLIT1O75093 1534 aa22.46■■□□□ 1.19
TRA2A-212ENST00000621813 NUDT16Q96DE0 195 aaKnown RBP22.45■■□□□ 1.18
TRA2A-212ENST00000621813 CT47B1P0C2W7 299 aaPredicted RBP22.45■■□□□ 1.18
TRA2A-212ENST00000621813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
TRA2A-212ENST00000621813 ARHGAP23Q9P227 1491 aa22.43■■□□□ 1.18
TRA2A-212ENST00000621813 AATKQ6ZMQ8 1374 aa22.43■■□□□ 1.18
TRA2A-212ENST00000621813 TMPOP42166 694 aaKnown RBP22.43■■□□□ 1.18
TRA2A-212ENST00000621813 NFKBIBQ15653 356 aa22.43■■□□□ 1.18
TRA2A-212ENST00000621813 ZNF692Q9BU19 519 aaPredicted RBP22.43■■□□□ 1.18
TRA2A-212ENST00000621813 TOPAZ1Q8N9V7 1692 aa22.43■■□□□ 1.18
TRA2A-212ENST00000621813 IL16Q14005 1332 aa22.42■■□□□ 1.18
TRA2A-212ENST00000621813 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
TRA2A-212ENST00000621813 RARSP54136 660 aaKnown RBP22.42■■□□□ 1.18
TRA2A-212ENST00000621813 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
TRA2A-212ENST00000621813 CDK12Q9NYV4 1490 aaPredicted RBP22.41■■□□□ 1.18
TRA2A-212ENST00000621813 FCHSD2O94868 740 aa22.41■■□□□ 1.18
TRA2A-212ENST00000621813 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
TRA2A-212ENST00000621813 POLKQ9UBT6 870 aa22.41■■□□□ 1.18
TRA2A-212ENST00000621813 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.4■■□□□ 1.18
TRA2A-212ENST00000621813 DIP2AQ14689 1571 aa22.4■■□□□ 1.18
TRA2A-212ENST00000621813 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
TRA2A-212ENST00000621813 LRRC7Q96NW7 1537 aa22.39■■□□□ 1.18
TRA2A-212ENST00000621813 LTKP29376 864 aa22.39■■□□□ 1.17
TRA2A-212ENST00000621813 A0A0U1RQG5 324 aaPredicted RBP22.38■■□□□ 1.17
TRA2A-212ENST00000621813 NRKQ7Z2Y5 1582 aa22.37■■□□□ 1.17
TRA2A-212ENST00000621813 PDIA4P13667 645 aaKnown RBP22.37■■□□□ 1.17
TRA2A-212ENST00000621813 PDE4AP27815 886 aa22.36■■□□□ 1.17
TRA2A-212ENST00000621813 COG3Q96JB2 828 aa22.36■■□□□ 1.17
TRA2A-212ENST00000621813 TRIM35Q9UPQ4 493 aa22.36■■□□□ 1.17
TRA2A-212ENST00000621813 BACH2Q9BYV9 841 aa22.35■■□□□ 1.17
TRA2A-212ENST00000621813 CEBPAP49715 358 aaPredicted RBP22.35■■□□□ 1.17
TRA2A-212ENST00000621813 NAP1L5Q96NT1 182 aaPredicted RBP22.35■■□□□ 1.17
TRA2A-212ENST00000621813 PTCH1Q13635 1447 aa22.34■■□□□ 1.17
TRA2A-212ENST00000621813 NME9Q86XW9 330 aa22.34■■□□□ 1.17
TRA2A-212ENST00000621813 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
TRA2A-212ENST00000621813 RIPK4P57078 832 aa22.33■■□□□ 1.17
TRA2A-212ENST00000621813 L1TD1Q5T7N2 865 aaKnown RBP22.33■■□□□ 1.17
TRA2A-212ENST00000621813 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
TRA2A-212ENST00000621813 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.16
TRA2A-212ENST00000621813 CLUAP1Q96AJ1 413 aa22.32■■□□□ 1.16
TRA2A-212ENST00000621813 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
TRA2A-212ENST00000621813 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms