RNA–Protein interactions for RNA: ENST00000618010.4

RAB4A-205, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB4A, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-205ENST00000618010 ADGRB1O14514 1584 aa23.17■■□□□ 1.3
RAB4A-205ENST00000618010 KDM5AP29375 1690 aaKnown RBP23.16■■□□□ 1.3
RAB4A-205ENST00000618010 TNPO1Q92973 898 aaKnown RBP23.16■■□□□ 1.3
RAB4A-205ENST00000618010 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.3
RAB4A-205ENST00000618010 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.3
RAB4A-205ENST00000618010 RBM10P98175 930 aaKnown RBP23.14■■□□□ 1.29
RAB4A-205ENST00000618010 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.29
RAB4A-205ENST00000618010 KIAA1211Q6ZU35 1233 aa23.13■■□□□ 1.29
RAB4A-205ENST00000618010 TCP11L2Q8N4U5 519 aa23.12■■□□□ 1.29
RAB4A-205ENST00000618010 MINK1Q8N4C8 1332 aaPredicted RBP23.11■■□□□ 1.29
RAB4A-205ENST00000618010 NSD3Q9BZ95 1437 aa23.11■■□□□ 1.29
RAB4A-205ENST00000618010 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
RAB4A-205ENST00000618010 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
RAB4A-205ENST00000618010 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
RAB4A-205ENST00000618010 SLC24A1O60721 1099 aa23.1■■□□□ 1.29
RAB4A-205ENST00000618010 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
RAB4A-205ENST00000618010 SETBP1Q9Y6X0 1596 aa23.09■■□□□ 1.29
RAB4A-205ENST00000618010 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
RAB4A-205ENST00000618010 PRAM1Q96QH2 718 aa23.09■■□□□ 1.29
RAB4A-205ENST00000618010 SBNO2Q9Y2G9 1366 aa23.09■■□□□ 1.29
RAB4A-205ENST00000618010 MYO5BQ9ULV0 1848 aa23.09■■□□□ 1.29
RAB4A-205ENST00000618010 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
RAB4A-205ENST00000618010 MORC1Q86VD1 984 aa23.08■■□□□ 1.29
RAB4A-205ENST00000618010 ARID3AQ99856 593 aa23.07■■□□□ 1.28
RAB4A-205ENST00000618010 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
RAB4A-205ENST00000618010 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
RAB4A-205ENST00000618010 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
RAB4A-205ENST00000618010 TPM2P07951 284 aa23.06■■□□□ 1.28
RAB4A-205ENST00000618010 PREX1Q8TCU6 1659 aa23.05■■□□□ 1.28
RAB4A-205ENST00000618010 PDCL3Q9H2J4 239 aa23.05■■□□□ 1.28
RAB4A-205ENST00000618010 GBP4Q96PP9 640 aa23.04■■□□□ 1.28
RAB4A-205ENST00000618010 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
RAB4A-205ENST00000618010 ITPRIPQ8IWB1 547 aa23.03■■□□□ 1.28
RAB4A-205ENST00000618010 DZIP1LQ8IYY4 767 aaKnown RBP23.03■■□□□ 1.28
RAB4A-205ENST00000618010 TSR2Q969E8 191 aaKnown RBP23.03■■□□□ 1.28
RAB4A-205ENST00000618010 RUNDC1Q96C34 613 aa23.03■■□□□ 1.28
RAB4A-205ENST00000618010 NPC1L1Q9UHC9 1359 aa23.03■■□□□ 1.28
RAB4A-205ENST00000618010 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
RAB4A-205ENST00000618010 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
RAB4A-205ENST00000618010 NASPP49321 788 aaPredicted RBP23.01■■□□□ 1.27
RAB4A-205ENST00000618010 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 TMEM131LA2VDJ0 1609 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 FAM13BQ9NYF5 915 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 CD2BP2O95400 341 aaKnown RBP23.01■■□□□ 1.27
RAB4A-205ENST00000618010 DDIT3P35638 169 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 NGEFQ8N5V2 710 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 LNPKQ9C0E8 428 aa23.01■■□□□ 1.27
RAB4A-205ENST00000618010 ISY1Q9ULR0 285 aaKnown RBP23■■□□□ 1.27
RAB4A-205ENST00000618010 AAMPQ13685 434 aa23■■□□□ 1.27
RAB4A-205ENST00000618010 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
RAB4A-205ENST00000618010 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
RAB4A-205ENST00000618010 CLTCQ00610 1675 aaKnown RBP22.99■■□□□ 1.27
RAB4A-205ENST00000618010 SSFA2P28290 1259 aa22.99■■□□□ 1.27
RAB4A-205ENST00000618010 SMC4Q9NTJ3 1288 aa22.99■■□□□ 1.27
RAB4A-205ENST00000618010 NCLP19338 710 aaKnown RBP22.98■■□□□ 1.27
RAB4A-205ENST00000618010 R3HCC1Q9Y3T6 440 aaKnown RBP22.98■■□□□ 1.27
RAB4A-205ENST00000618010 MTHFSP49914 203 aa22.97■■□□□ 1.27
RAB4A-205ENST00000618010 RAB3GAP1Q15042 981 aa22.97■■□□□ 1.27
RAB4A-205ENST00000618010 MSNP26038 577 aaKnown RBP22.97■■□□□ 1.27
RAB4A-205ENST00000618010 ZSCAN30Q86W11 494 aa22.96■■□□□ 1.27
RAB4A-205ENST00000618010 GGNBP2Q9H3C7 697 aa22.96■■□□□ 1.27
RAB4A-205ENST00000618010 RIPK4P57078 832 aa22.96■■□□□ 1.27
RAB4A-205ENST00000618010 SMC5Q8IY18 1101 aa22.96■■□□□ 1.27
RAB4A-205ENST00000618010 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
RAB4A-205ENST00000618010 DDX49Q9Y6V7 483 aaKnown RBP22.96■■□□□ 1.27
RAB4A-205ENST00000618010 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
RAB4A-205ENST00000618010 CCDC173Q0VFZ6 552 aa22.95■■□□□ 1.27
RAB4A-205ENST00000618010 ARHGEF28Q8N1W1 1705 aaKnown RBP22.95■■□□□ 1.26
RAB4A-205ENST00000618010 SKOR2Q2VWA4 1001 aaPredicted RBP22.95■■□□□ 1.26
RAB4A-205ENST00000618010 ZMYM3Q14202 1370 aa22.95■■□□□ 1.26
RAB4A-205ENST00000618010 TRIM27P14373 513 aa22.95■■□□□ 1.26
RAB4A-205ENST00000618010 WDR63Q8IWG1 891 aa22.95■■□□□ 1.26
RAB4A-205ENST00000618010 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
RAB4A-205ENST00000618010 OFD1O75665 1012 aa22.93■■□□□ 1.26
RAB4A-205ENST00000618010 CEBPAP49715 358 aaPredicted RBP22.93■■□□□ 1.26
RAB4A-205ENST00000618010 EXOSC9Q06265 439 aaKnown RBP22.93■■□□□ 1.26
RAB4A-205ENST00000618010 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
RAB4A-205ENST00000618010 CDK19Q9BWU1 502 aa22.92■■□□□ 1.26
RAB4A-205ENST00000618010 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
RAB4A-205ENST00000618010 RBM25P49756 843 aaKnown RBP22.92■■□□□ 1.26
RAB4A-205ENST00000618010 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
RAB4A-205ENST00000618010 SNX21Q969T3 373 aa22.92■■□□□ 1.26
RAB4A-205ENST00000618010 A0A1W2PP64 1363 aa22.92■■□□□ 1.26
RAB4A-205ENST00000618010 A2ML1A8K2U0 1454 aa22.91■■□□□ 1.26
RAB4A-205ENST00000618010 PTPRMP28827 1452 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 GAS2L2Q8NHY3 880 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 RIMS2Q9UQ26 1411 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
RAB4A-205ENST00000618010 ZBTB7CA1YPR0 619 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
RAB4A-205ENST00000618010 SSH1Q8WYL5 1049 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 PPP1R9BQ96SB3 815 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 NOB1Q9ULX3 412 aaKnown RBP22.9■■□□□ 1.26
RAB4A-205ENST00000618010 AGLP35573 1532 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
RAB4A-205ENST00000618010 HDAC1Q13547 482 aaPredicted RBP22.89■■□□□ 1.26
RAB4A-205ENST00000618010 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.26
RAB4A-205ENST00000618010 KIF2CQ99661 725 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms