RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
C11orf54-215ENST00000617482 SLKQ9H2G2 1235 aaPredicted RBP15.03■□□□□ -0
C11orf54-215ENST00000617482 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
C11orf54-215ENST00000617482 TRIM27P14373 513 aa15.03■□□□□ -0
C11orf54-215ENST00000617482 RIPK4P57078 832 aa15.03■□□□□ -0
C11orf54-215ENST00000617482 BECN1Q14457 450 aa15.03■□□□□ -0
C11orf54-215ENST00000617482 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
C11orf54-215ENST00000617482 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
C11orf54-215ENST00000617482 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
C11orf54-215ENST00000617482 BRPF3Q9ULD4 1205 aa15.02□□□□□ -0.01
C11orf54-215ENST00000617482 NOB1Q9ULX3 412 aaKnown RBP15.02□□□□□ -0.01
C11orf54-215ENST00000617482 PIK3C2BO00750 1634 aa15.01□□□□□ -0.01
C11orf54-215ENST00000617482 FBLN1P23142 703 aa15.01□□□□□ -0.01
C11orf54-215ENST00000617482 MYO5BQ9ULV0 1848 aa15.01□□□□□ -0.01
C11orf54-215ENST00000617482 NEO1Q92859 1461 aa15.01□□□□□ -0.01
C11orf54-215ENST00000617482 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
C11orf54-215ENST00000617482 CT47B1P0C2W7 299 aaPredicted RBP15.01□□□□□ -0.01
C11orf54-215ENST00000617482 CABP1Q9NZU7 370 aa15.01□□□□□ -0.01
C11orf54-215ENST00000617482 TBC1D32Q96NH3 1257 aa15□□□□□ -0.01
C11orf54-215ENST00000617482 CDK19Q9BWU1 502 aa15□□□□□ -0.01
C11orf54-215ENST00000617482 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
C11orf54-215ENST00000617482 NLRP1Q9C000 1473 aa14.99□□□□□ -0.01
C11orf54-215ENST00000617482 ARHGAP31Q2M1Z3 1444 aa14.99□□□□□ -0.01
C11orf54-215ENST00000617482 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
C11orf54-215ENST00000617482 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
C11orf54-215ENST00000617482 RICTORQ6R327 1708 aa14.99□□□□□ -0.01
C11orf54-215ENST00000617482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
C11orf54-215ENST00000617482 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
C11orf54-215ENST00000617482 ZFYVE9O95405 1425 aa14.98□□□□□ -0.01
C11orf54-215ENST00000617482 ADGRB2O60241 1585 aa14.98□□□□□ -0.01
C11orf54-215ENST00000617482 TMEM57Q8N5G2 664 aa14.97□□□□□ -0.01
C11orf54-215ENST00000617482 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
C11orf54-215ENST00000617482 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
C11orf54-215ENST00000617482 PTPRMP28827 1452 aa14.97□□□□□ -0.01
C11orf54-215ENST00000617482 UBE2Q2Q8WVN8 375 aa14.97□□□□□ -0.01
C11orf54-215ENST00000617482 TBC1D2Q9BYX2 928 aa14.96□□□□□ -0.01
C11orf54-215ENST00000617482 COL3A1P02461 1466 aaPredicted RBP14.96□□□□□ -0.01
C11orf54-215ENST00000617482 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
C11orf54-215ENST00000617482 VIRMAQ69YN4 1812 aaKnown RBP14.96□□□□□ -0.01
C11orf54-215ENST00000617482 SPRYD3Q8NCJ5 442 aa14.96□□□□□ -0.01
C11orf54-215ENST00000617482 HDAC1Q13547 482 aaPredicted RBP14.95□□□□□ -0.02
C11orf54-215ENST00000617482 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
C11orf54-215ENST00000617482 IL16Q14005 1332 aa14.95□□□□□ -0.02
C11orf54-215ENST00000617482 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
C11orf54-215ENST00000617482 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
C11orf54-215ENST00000617482 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
C11orf54-215ENST00000617482 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
C11orf54-215ENST00000617482 ANTXR1Q9H6X2 564 aa14.94□□□□□ -0.02
C11orf54-215ENST00000617482 ZBTB40Q9NUA8 1239 aa14.94□□□□□ -0.02
C11orf54-215ENST00000617482 FCHSD2O94868 740 aa14.93□□□□□ -0.02
C11orf54-215ENST00000617482 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
C11orf54-215ENST00000617482 HMOX1P09601 288 aa14.93□□□□□ -0.02
C11orf54-215ENST00000617482 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
C11orf54-215ENST00000617482 POLKQ9UBT6 870 aa14.93□□□□□ -0.02
C11orf54-215ENST00000617482 PNPLA6Q8IY17 1366 aa14.92□□□□□ -0.02
C11orf54-215ENST00000617482 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
C11orf54-215ENST00000617482 PREX1Q8TCU6 1659 aa14.92□□□□□ -0.02
C11orf54-215ENST00000617482 MLECQ14165 292 aa14.92□□□□□ -0.02
C11orf54-215ENST00000617482 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
C11orf54-215ENST00000617482 TMEM131LA2VDJ0 1609 aa14.91□□□□□ -0.02
C11orf54-215ENST00000617482 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
C11orf54-215ENST00000617482 PHACTR3Q96KR7 559 aa14.91□□□□□ -0.02
C11orf54-215ENST00000617482 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
C11orf54-215ENST00000617482 TSPOAP1O95153 1857 aa14.91□□□□□ -0.02
C11orf54-215ENST00000617482 KIF16BQ96L93 1317 aa14.9□□□□□ -0.02
C11orf54-215ENST00000617482 MED14O60244 1454 aa14.9□□□□□ -0.02
C11orf54-215ENST00000617482 LNPKQ9C0E8 428 aa14.9□□□□□ -0.02
C11orf54-215ENST00000617482 ARHGEF40Q8TER5 1519 aa14.89□□□□□ -0.03
C11orf54-215ENST00000617482 ELL2O00472 640 aaPredicted RBP14.89□□□□□ -0.03
C11orf54-215ENST00000617482 ARXQ96QS3 562 aa14.89□□□□□ -0.03
C11orf54-215ENST00000617482 ALDH1L2Q3SY69 923 aa14.88□□□□□ -0.03
C11orf54-215ENST00000617482 EMILIN1Q9Y6C2 1016 aa14.88□□□□□ -0.03
C11orf54-215ENST00000617482 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
C11orf54-215ENST00000617482 TSPYL6Q8N831 410 aa14.87□□□□□ -0.03
C11orf54-215ENST00000617482 PODXL2Q9NZ53 605 aa14.87□□□□□ -0.03
C11orf54-215ENST00000617482 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
C11orf54-215ENST00000617482 NUCB1Q02818 461 aa14.87□□□□□ -0.03
C11orf54-215ENST00000617482 NFE2L2Q16236 605 aa14.86□□□□□ -0.03
C11orf54-215ENST00000617482 NME9Q86XW9 330 aa14.86□□□□□ -0.03
C11orf54-215ENST00000617482 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
C11orf54-215ENST00000617482 ZBTB22O15209 634 aa14.85□□□□□ -0.03
C11orf54-215ENST00000617482 VAMP4O75379 141 aa14.85□□□□□ -0.03
C11orf54-215ENST00000617482 CHD1LQ86WJ1 897 aa14.85□□□□□ -0.03
C11orf54-215ENST00000617482 LRRC7Q96NW7 1537 aa14.84□□□□□ -0.03
C11orf54-215ENST00000617482 FAM135BQ49AJ0 1406 aa14.84□□□□□ -0.03
C11orf54-215ENST00000617482 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
C11orf54-215ENST00000617482 ZBTB7BO15156 539 aaPredicted RBP14.84□□□□□ -0.03
C11orf54-215ENST00000617482 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
C11orf54-215ENST00000617482 IL13P35225 146 aa14.83□□□□□ -0.04
C11orf54-215ENST00000617482 MRPL50Q8N5N7 158 aaKnown RBP14.83□□□□□ -0.04
C11orf54-215ENST00000617482 CLTCQ00610 1675 aaKnown RBP14.83□□□□□ -0.04
C11orf54-215ENST00000617482 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
C11orf54-215ENST00000617482 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
C11orf54-215ENST00000617482 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.04
C11orf54-215ENST00000617482 MBIPQ9NS73 344 aa14.83□□□□□ -0.04
C11orf54-215ENST00000617482 ANKRD26Q9UPS8 1709 aa14.83□□□□□ -0.04
C11orf54-215ENST00000617482 GNAI1P63096 354 aa14.82□□□□□ -0.04
C11orf54-215ENST00000617482 ZNF428Q96B54 188 aa14.82□□□□□ -0.04
C11orf54-215ENST00000617482 WASLO00401 505 aaPredicted RBP14.81□□□□□ -0.04
C11orf54-215ENST00000617482 BRPF1P55201 1214 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms