RNA–Protein interactions for RNA: ENST00000616704.4

ELK4-204, Transcript of ELK4, ETS transcription factor, human

TSL 2

Gene ELK4, Length 2,535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELK4-204	ENST00000616704	TBC1D2	Q9BYX2	928 aa		32.01	■■■□□ 2.72
ELK4-204	ENST00000616704	ALK	Q9UM73	1620 aa		32	■■■□□ 2.71
ELK4-204	ENST00000616704	RIMS2	Q9UQ26	1411 aa		32	■■■□□ 2.71
ELK4-204	ENST00000616704	CABP2	Q9NPB3	220 aa		31.99	■■■□□ 2.71
ELK4-204	ENST00000616704	TULP4	Q9NRJ4	1543 aa		31.99	■■■□□ 2.71
ELK4-204	ENST00000616704	PLPPR3	Q6T4P5	718 aa		31.98	■■■□□ 2.71
ELK4-204	ENST00000616704	CEBPA	P49715	358 aa	Predicted RBP	31.98	■■■□□ 2.71
ELK4-204	ENST00000616704	PRAM1	Q96QH2	718 aa		31.98	■■■□□ 2.71
ELK4-204	ENST00000616704	RWDD1	Q9H446	243 aa	Predicted RBP	31.98	■■■□□ 2.71
ELK4-204	ENST00000616704	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.97	■■■□□ 2.71
ELK4-204	ENST00000616704	EVC2	Q86UK5	1308 aa		31.96	■■■□□ 2.71
ELK4-204	ENST00000616704	EIF5B	O60841	1220 aa	Known RBP	31.95	■■■□□ 2.7
ELK4-204	ENST00000616704	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.95	■■■□□ 2.7
ELK4-204	ENST00000616704	PTPRM	P28827	1452 aa		31.95	■■■□□ 2.7
ELK4-204	ENST00000616704	MTHFS	P49914	203 aa		31.94	■■■□□ 2.7
ELK4-204	ENST00000616704	CCDC27	Q2M243	656 aa		31.93	■■■□□ 2.7
ELK4-204	ENST00000616704	TNR	Q92752	1358 aa		31.92	■■■□□ 2.7
ELK4-204	ENST00000616704	L1TD1	Q5T7N2	865 aa	Known RBP	31.92	■■■□□ 2.7
ELK4-204	ENST00000616704	MVP	Q14764	893 aa	Known RBP	31.9	■■■□□ 2.7
ELK4-204	ENST00000616704	MYH16	Q9H6N6	1097 aa		31.9	■■■□□ 2.7
ELK4-204	ENST00000616704	SRPK2	P78362	688 aa	Known RBP	31.88	■■■□□ 2.69
ELK4-204	ENST00000616704	SPRYD3	Q8NCJ5	442 aa		31.88	■■■□□ 2.69
ELK4-204	ENST00000616704	CFAP53	Q96M91	514 aa		31.88	■■■□□ 2.69
ELK4-204	ENST00000616704	RSPH6A	Q9H0K4	717 aa		31.88	■■■□□ 2.69
ELK4-204	ENST00000616704	WAPL	Q7Z5K2	1190 aa		31.86	■■■□□ 2.69
ELK4-204	ENST00000616704	ZKSCAN2	Q63HK3	967 aa		31.85	■■■□□ 2.69
ELK4-204	ENST00000616704	FTSJ3	Q8IY81	847 aa	Known RBP	31.84	■■■□□ 2.69
ELK4-204	ENST00000616704	DZIP1L	Q8IYY4	767 aa	Known RBP	31.83	■■■□□ 2.69
ELK4-204	ENST00000616704	SETD1A	O15047	1707 aa	Known RBP	31.82	■■■□□ 2.69
ELK4-204	ENST00000616704	RRAGD	Q9NQL2	400 aa	Predicted RBP	31.82	■■■□□ 2.68
ELK4-204	ENST00000616704	NRXN3	Q9Y4C0	1643 aa		31.82	■■■□□ 2.68
ELK4-204	ENST00000616704	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.82	■■■□□ 2.68
ELK4-204	ENST00000616704	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.82	■■■□□ 2.68
ELK4-204	ENST00000616704	ARX	Q96QS3	562 aa		31.81	■■■□□ 2.68
ELK4-204	ENST00000616704	MCM4	P33991	863 aa		31.81	■■■□□ 2.68
ELK4-204	ENST00000616704	C22orf23	Q9BZE7	217 aa		31.81	■■■□□ 2.68
ELK4-204	ENST00000616704	MET	P08581	1390 aa		31.8	■■■□□ 2.68
ELK4-204	ENST00000616704	MFAP1	P55081	439 aa	Known RBP	31.8	■■■□□ 2.68
ELK4-204	ENST00000616704	UBR1	Q8IWV7	1749 aa		31.79	■■■□□ 2.68
ELK4-204	ENST00000616704	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.78	■■■□□ 2.68
ELK4-204	ENST00000616704	TSR2	Q969E8	191 aa	Known RBP	31.78	■■■□□ 2.68
ELK4-204	ENST00000616704	NCBP3	Q53F19	620 aa	Known RBP	31.78	■■■□□ 2.68
ELK4-204	ENST00000616704	USP32	Q8NFA0	1604 aa		31.77	■■■□□ 2.68
ELK4-204	ENST00000616704	PUS7	Q96PZ0	661 aa	Known RBP	31.77	■■■□□ 2.68
ELK4-204	ENST00000616704	GOLGA6L3	A6NEY3	463 aa		31.76	■■■□□ 2.67
ELK4-204	ENST00000616704	XRCC6	P12956	609 aa	Known RBP eCLIP	31.76	■■■□□ 2.67
ELK4-204	ENST00000616704	ANKRD36B	Q8N2N9	1353 aa		31.76	■■■□□ 2.67
ELK4-204	ENST00000616704	TMEM2	Q9UHN6	1383 aa		31.76	■■■□□ 2.67
ELK4-204	ENST00000616704	CDK19	Q9BWU1	502 aa		31.75	■■■□□ 2.67
ELK4-204	ENST00000616704	GZF1	Q9H116	711 aa	Predicted RBP	31.75	■■■□□ 2.67
ELK4-204	ENST00000616704	SMC4	Q9NTJ3	1288 aa		31.75	■■■□□ 2.67
ELK4-204	ENST00000616704	CHMP5	Q9NZZ3	219 aa		31.75	■■■□□ 2.67
ELK4-204	ENST00000616704	FSD2	A1L4K1	749 aa		31.74	■■■□□ 2.67
ELK4-204	ENST00000616704	CT47B1	P0C2W7	299 aa	Predicted RBP	31.73	■■■□□ 2.67
ELK4-204	ENST00000616704	TRIM27	P14373	513 aa		31.73	■■■□□ 2.67
ELK4-204	ENST00000616704	TXNDC2	Q86VQ3	553 aa		31.73	■■■□□ 2.67
ELK4-204	ENST00000616704	C3	P01024	1663 aa		31.73	■■■□□ 2.67
ELK4-204	ENST00000616704		A0A1W2PP64	1363 aa		31.73	■■■□□ 2.67
ELK4-204	ENST00000616704	HDAC1	Q13547	482 aa	Predicted RBP	31.72	■■■□□ 2.67
ELK4-204	ENST00000616704	LTK	P29376	864 aa		31.72	■■■□□ 2.67
ELK4-204	ENST00000616704	EXOSC9	Q06265	439 aa	Known RBP	31.72	■■■□□ 2.67
ELK4-204	ENST00000616704	ADGRB2	O60241	1585 aa		31.71	■■■□□ 2.67
ELK4-204	ENST00000616704	FER1L4	A9Z1Z3	1794 aa		31.71	■■■□□ 2.67
ELK4-204	ENST00000616704	ITPRIP	Q8IWB1	547 aa		31.71	■■■□□ 2.67
ELK4-204	ENST00000616704	HDGF	P51858	240 aa	Known RBP	31.69	■■■□□ 2.66
ELK4-204	ENST00000616704	SSH1	Q8WYL5	1049 aa		31.69	■■■□□ 2.66
ELK4-204	ENST00000616704	DDX19B	Q9UMR2	479 aa		31.69	■■■□□ 2.66
ELK4-204	ENST00000616704	NSD2	O96028	1365 aa		31.68	■■■□□ 2.66
ELK4-204	ENST00000616704	ABCC11	Q96J66	1382 aa		31.68	■■■□□ 2.66
ELK4-204	ENST00000616704	PANK2	Q9BZ23	570 aa		31.67	■■■□□ 2.66
ELK4-204	ENST00000616704	TRAK2	O60296	914 aa		31.67	■■■□□ 2.66
ELK4-204	ENST00000616704	ATAD2	Q6PL18	1390 aa		31.66	■■■□□ 2.66
ELK4-204	ENST00000616704	CABP1	Q9NZU7	370 aa		31.66	■■■□□ 2.66
ELK4-204	ENST00000616704	ATF7IP	Q6VMQ6	1270 aa		31.66	■■■□□ 2.66
ELK4-204	ENST00000616704	DLC1	Q96QB1	1528 aa		31.65	■■■□□ 2.66
ELK4-204	ENST00000616704	SMC5	Q8IY18	1101 aa		31.65	■■■□□ 2.66
ELK4-204	ENST00000616704	HSCB	Q8IWL3	235 aa		31.64	■■■□□ 2.66
ELK4-204	ENST00000616704	UBE2Q2	Q8WVN8	375 aa		31.64	■■■□□ 2.66
ELK4-204	ENST00000616704	CD163L1	Q9NR16	1453 aa		31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	U2SURP	O15042	1029 aa	Known RBP	31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	TMPO	P42166	694 aa	Known RBP	31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	PLEKHF1	Q96S99	279 aa		31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	NOB1	Q9ULX3	412 aa	Known RBP	31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	TRIM35	Q9UPQ4	493 aa		31.63	■■■□□ 2.65
ELK4-204	ENST00000616704	GGNBP2	Q9H3C7	697 aa		31.62	■■■□□ 2.65
ELK4-204	ENST00000616704	ZNF692	Q9BU19	519 aa	Predicted RBP	31.61	■■■□□ 2.65
ELK4-204	ENST00000616704	TMEM57	Q8N5G2	664 aa		31.6	■■■□□ 2.65
ELK4-204	ENST00000616704	SLC26A8	Q96RN1	970 aa		31.6	■■■□□ 2.65
ELK4-204	ENST00000616704	ADAMTS13	Q76LX8	1427 aa		31.59	■■■□□ 2.65
ELK4-204	ENST00000616704	TERF2IP	Q9NYB0	399 aa		31.59	■■■□□ 2.65
ELK4-204	ENST00000616704	ZBTB40	Q9NUA8	1239 aa		31.57	■■■□□ 2.65
ELK4-204	ENST00000616704	NCKAP5L	Q9HCH0	1330 aa		31.56	■■■□□ 2.64
ELK4-204	ENST00000616704	DDX11L8	A8MPP1	907 aa		31.55	■■■□□ 2.64
ELK4-204	ENST00000616704	FYB1	O15117	783 aa		31.54	■■■□□ 2.64
ELK4-204	ENST00000616704	MRE11	P49959	708 aa		31.54	■■■□□ 2.64
ELK4-204	ENST00000616704	NCOA3	Q9Y6Q9	1424 aa		31.54	■■■□□ 2.64
ELK4-204	ENST00000616704	WASL	O00401	505 aa	Predicted RBP	31.53	■■■□□ 2.64
ELK4-204	ENST00000616704	ROBO2	Q9HCK4	1378 aa		31.53	■■■□□ 2.64
ELK4-204	ENST00000616704	RBM25	P49756	843 aa	Known RBP	31.53	■■■□□ 2.64
ELK4-204	ENST00000616704	DDIT3	P35638	169 aa		31.52	■■■□□ 2.64

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms