RNA–Protein interactions for RNA: ENST00000614239.1

LHX1-201, Transcript of LIM homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX1, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-201ENST00000614239 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
LHX1-201ENST00000614239 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
LHX1-201ENST00000614239 ADGRF5Q8IZF2 1346 aa17.36■□□□□ 0.37
LHX1-201ENST00000614239 KDM5CP41229 1560 aa17.36■□□□□ 0.37
LHX1-201ENST00000614239 ZSCAN23Q3MJ62 389 aa17.36■□□□□ 0.37
LHX1-201ENST00000614239 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
LHX1-201ENST00000614239 PARD3Q8TEW0 1356 aa17.35■□□□□ 0.37
LHX1-201ENST00000614239 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
LHX1-201ENST00000614239 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
LHX1-201ENST00000614239 PTMSP20962 102 aa17.34■□□□□ 0.37
LHX1-201ENST00000614239 ZNF500O60304 480 aaPredicted RBP17.34■□□□□ 0.37
LHX1-201ENST00000614239 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
LHX1-201ENST00000614239 A2MP01023 1474 aa17.33■□□□□ 0.37
LHX1-201ENST00000614239 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.37
LHX1-201ENST00000614239 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
LHX1-201ENST00000614239 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
LHX1-201ENST00000614239 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.37
LHX1-201ENST00000614239 ABCC1P33527 1531 aa17.33■□□□□ 0.36
LHX1-201ENST00000614239 SLFN5Q08AF3 891 aa17.33■□□□□ 0.36
LHX1-201ENST00000614239 ASXL2Q76L83 1435 aa17.32■□□□□ 0.36
LHX1-201ENST00000614239 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
LHX1-201ENST00000614239 LNPKQ9C0E8 428 aa17.31■□□□□ 0.36
LHX1-201ENST00000614239 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
LHX1-201ENST00000614239 UHRF1BP1Q6BDS2 1440 aa17.31■□□□□ 0.36
LHX1-201ENST00000614239 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
LHX1-201ENST00000614239 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
LHX1-201ENST00000614239 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
LHX1-201ENST00000614239 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
LHX1-201ENST00000614239 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
LHX1-201ENST00000614239 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
LHX1-201ENST00000614239 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
LHX1-201ENST00000614239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
LHX1-201ENST00000614239 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
LHX1-201ENST00000614239 HMGN5P82970 282 aaKnown RBP17.29■□□□□ 0.36
LHX1-201ENST00000614239 KLHL34Q8N239 644 aa17.29■□□□□ 0.36
LHX1-201ENST00000614239 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.29■□□□□ 0.36
LHX1-201ENST00000614239 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
LHX1-201ENST00000614239 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 KANK1Q14678 1352 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
LHX1-201ENST00000614239 MTHFSP49914 203 aa17.27■□□□□ 0.36
LHX1-201ENST00000614239 ZNF710Q8N1W2 664 aa17.27■□□□□ 0.36
LHX1-201ENST00000614239 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
LHX1-201ENST00000614239 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.36
LHX1-201ENST00000614239 TAF3Q5VWG9 929 aa17.27■□□□□ 0.36
LHX1-201ENST00000614239 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
LHX1-201ENST00000614239 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.36
LHX1-201ENST00000614239 FANCAO15360 1455 aa17.27■□□□□ 0.35
LHX1-201ENST00000614239 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.35
LHX1-201ENST00000614239 RLBP1P12271 317 aa17.27■□□□□ 0.35
LHX1-201ENST00000614239 IRX5P78411 483 aaPredicted RBP17.26■□□□□ 0.35
LHX1-201ENST00000614239 ABCA9Q8IUA7 1624 aa17.26■□□□□ 0.35
LHX1-201ENST00000614239 FBLN1P23142 703 aa17.25■□□□□ 0.35
LHX1-201ENST00000614239 MLECQ14165 292 aa17.25■□□□□ 0.35
LHX1-201ENST00000614239 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
LHX1-201ENST00000614239 DUOX2Q9NRD8 1548 aa17.25■□□□□ 0.35
LHX1-201ENST00000614239 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
LHX1-201ENST00000614239 DHX37Q8IY37 1157 aaKnown RBP17.25■□□□□ 0.35
LHX1-201ENST00000614239 UNC13BO14795 1591 aa17.24■□□□□ 0.35
LHX1-201ENST00000614239 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
LHX1-201ENST00000614239 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
LHX1-201ENST00000614239 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
LHX1-201ENST00000614239 ARAP3Q8WWN8 1544 aa17.24■□□□□ 0.35
LHX1-201ENST00000614239 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
LHX1-201ENST00000614239 TSR2Q969E8 191 aaKnown RBP17.24■□□□□ 0.35
LHX1-201ENST00000614239 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
LHX1-201ENST00000614239 USP25Q9UHP3 1055 aa17.24■□□□□ 0.35
LHX1-201ENST00000614239 RAPGEF3O95398 923 aa17.23■□□□□ 0.35
LHX1-201ENST00000614239 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
LHX1-201ENST00000614239 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
LHX1-201ENST00000614239 CCDC66A2RUB6 948 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 NPHP1O15259 732 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 SPC24Q8NBT2 197 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 ZNF592Q92610 1267 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 PKP1Q13835 747 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 TMX1Q9H3N1 280 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
LHX1-201ENST00000614239 APPP05067 770 aa17.21■□□□□ 0.35
LHX1-201ENST00000614239 MINK1Q8N4C8 1332 aaPredicted RBP17.21■□□□□ 0.35
LHX1-201ENST00000614239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
LHX1-201ENST00000614239 SOX12O15370 315 aa17.21■□□□□ 0.34
LHX1-201ENST00000614239 SMC5Q8IY18 1101 aa17.21■□□□□ 0.34
LHX1-201ENST00000614239 ZFYVE16Q7Z3T8 1539 aa17.2■□□□□ 0.34
LHX1-201ENST00000614239 ADGRL1O94910 1474 aa17.2■□□□□ 0.34
LHX1-201ENST00000614239 TIGD1Q96MW7 591 aa17.2■□□□□ 0.34
LHX1-201ENST00000614239 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
LHX1-201ENST00000614239 MCM5P33992 734 aa17.19■□□□□ 0.34
LHX1-201ENST00000614239 PRIMPOLQ96LW4 560 aa17.19■□□□□ 0.34
LHX1-201ENST00000614239 SECISBP2LQ93073 1101 aaKnown RBP17.19■□□□□ 0.34
LHX1-201ENST00000614239 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
LHX1-201ENST00000614239 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
LHX1-201ENST00000614239 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
LHX1-201ENST00000614239 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
LHX1-201ENST00000614239 RIOK3O14730 519 aaKnown RBP17.18■□□□□ 0.34
LHX1-201ENST00000614239 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
LHX1-201ENST00000614239 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
LHX1-201ENST00000614239 CFAP65Q6ZU64 1925 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms