RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
FAM228B-205ENST00000611127 Q6ZNB5 142 aa12.74□□□□□ -0.37
FAM228B-205ENST00000611127 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
FAM228B-205ENST00000611127 RPIAP49247 311 aa12.72□□□□□ -0.37
FAM228B-205ENST00000611127 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
FAM228B-205ENST00000611127 EMID1Q96A84 441 aaPredicted RBP12.72□□□□□ -0.37
FAM228B-205ENST00000611127 REPIN1Q9BWE0 567 aaKnown RBP12.72□□□□□ -0.37
FAM228B-205ENST00000611127 PDZRN3Q9UPQ7 1066 aa12.72□□□□□ -0.37
FAM228B-205ENST00000611127 LIAT1Q6ZQX7 453 aa12.71□□□□□ -0.37
FAM228B-205ENST00000611127 USB1Q9BQ65 265 aaKnown RBP12.71□□□□□ -0.37
FAM228B-205ENST00000611127 PLB1Q6P1J6 1458 aa12.71□□□□□ -0.38
FAM228B-205ENST00000611127 ASXL2Q76L83 1435 aa12.71□□□□□ -0.38
FAM228B-205ENST00000611127 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
FAM228B-205ENST00000611127 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
FAM228B-205ENST00000611127 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
FAM228B-205ENST00000611127 KDM5BQ9UGL1 1544 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 TRIM66O15016 1216 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 MMP16P51512 607 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 PRR20EP86478 221 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 PRR20CP86479 221 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 PRR20DP86480 221 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 PRR20BP86481 221 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 PRR20AP86496 221 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
FAM228B-205ENST00000611127 CTTNBP2Q8WZ74 1663 aa12.68□□□□□ -0.38
FAM228B-205ENST00000611127 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
FAM228B-205ENST00000611127 ZNF697Q5TEC3 545 aa12.67□□□□□ -0.38
FAM228B-205ENST00000611127 CD2BP2O95400 341 aaKnown RBP12.66□□□□□ -0.38
FAM228B-205ENST00000611127 KIF13AQ9H1H9 1805 aa12.65□□□□□ -0.38
FAM228B-205ENST00000611127 PRDM9Q9NQV7 894 aa12.65□□□□□ -0.38
FAM228B-205ENST00000611127 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
FAM228B-205ENST00000611127 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
FAM228B-205ENST00000611127 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
FAM228B-205ENST00000611127 FDX1P10109 184 aa12.63□□□□□ -0.39
FAM228B-205ENST00000611127 GJA5P36382 358 aa12.63□□□□□ -0.39
FAM228B-205ENST00000611127 RANGAP1P46060 587 aaPredicted RBP12.63□□□□□ -0.39
FAM228B-205ENST00000611127 TRIM67Q6ZTA4 783 aa12.63□□□□□ -0.39
FAM228B-205ENST00000611127 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
FAM228B-205ENST00000611127 SPIRE2Q8WWL2 714 aa12.63□□□□□ -0.39
FAM228B-205ENST00000611127 ABCA8O94911 1581 aa12.62□□□□□ -0.39
FAM228B-205ENST00000611127 GLI2P10070 1586 aa12.62□□□□□ -0.39
FAM228B-205ENST00000611127 HLA-CQ95604 372 aa12.62□□□□□ -0.39
FAM228B-205ENST00000611127 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
FAM228B-205ENST00000611127 EPRSP07814 1512 aaKnown RBP12.62□□□□□ -0.39
FAM228B-205ENST00000611127 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
FAM228B-205ENST00000611127 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
FAM228B-205ENST00000611127 WDR7Q9Y4E6 1490 aa12.6□□□□□ -0.39
FAM228B-205ENST00000611127 SPDYE5A6NIY4 337 aa12.6□□□□□ -0.39
FAM228B-205ENST00000611127 KIF21BO75037 1637 aa12.59□□□□□ -0.39
FAM228B-205ENST00000611127 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
FAM228B-205ENST00000611127 GDF9O60383 454 aa12.59□□□□□ -0.39
FAM228B-205ENST00000611127 JUNDP17535 347 aa12.58□□□□□ -0.4
FAM228B-205ENST00000611127 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
FAM228B-205ENST00000611127 SAMD9Q5K651 1589 aa12.58□□□□□ -0.4
FAM228B-205ENST00000611127 ARID3CA6NKF2 412 aa12.57□□□□□ -0.4
FAM228B-205ENST00000611127 PDE4DQ08499 809 aa12.57□□□□□ -0.4
FAM228B-205ENST00000611127 DGAT1O75907 488 aa12.56□□□□□ -0.4
FAM228B-205ENST00000611127 ATP10BO94823 1461 aa12.56□□□□□ -0.4
FAM228B-205ENST00000611127 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
FAM228B-205ENST00000611127 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
FAM228B-205ENST00000611127 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
FAM228B-205ENST00000611127 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
FAM228B-205ENST00000611127 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
FAM228B-205ENST00000611127 MOXD2PA6NHM9 499 aa12.54□□□□□ -0.4
FAM228B-205ENST00000611127 PKDCCQ504Y2 493 aa12.54□□□□□ -0.4
FAM228B-205ENST00000611127 KDM6BO15054 1643 aa12.54□□□□□ -0.4
FAM228B-205ENST00000611127 CD109Q6YHK3 1445 aa12.54□□□□□ -0.4
FAM228B-205ENST00000611127 MS4A1P11836 297 aa12.53□□□□□ -0.4
FAM228B-205ENST00000611127 TRIM32Q13049 653 aa12.53□□□□□ -0.4
FAM228B-205ENST00000611127 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
FAM228B-205ENST00000611127 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
FAM228B-205ENST00000611127 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.4
FAM228B-205ENST00000611127 TNFRSF10AO00220 468 aa12.52□□□□□ -0.41
FAM228B-205ENST00000611127 MTMR2Q13614 643 aa12.52□□□□□ -0.41
FAM228B-205ENST00000611127 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
FAM228B-205ENST00000611127 NDUFV2P19404 249 aa12.51□□□□□ -0.41
FAM228B-205ENST00000611127 RSBN1LQ6PCB5 846 aaPredicted RBP12.51□□□□□ -0.41
FAM228B-205ENST00000611127 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
FAM228B-205ENST00000611127 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
FAM228B-205ENST00000611127 PLEKHD1A6NEE1 506 aa12.5□□□□□ -0.41
FAM228B-205ENST00000611127 FOXC1Q12948 553 aa12.5□□□□□ -0.41
FAM228B-205ENST00000611127 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
FAM228B-205ENST00000611127 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
FAM228B-205ENST00000611127 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
FAM228B-205ENST00000611127 TSPOAP1O95153 1857 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 WNT7AO00755 349 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 LCE2BO14633 110 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 SPTLC1O15269 473 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
FAM228B-205ENST00000611127 WNT7BP56706 349 aa12.48□□□□□ -0.41
FAM228B-205ENST00000611127 PTPRNQ16849 979 aa12.48□□□□□ -0.41
FAM228B-205ENST00000611127 PRPF38BQ5VTL8 546 aaKnown RBP12.48□□□□□ -0.41
FAM228B-205ENST00000611127 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
FAM228B-205ENST00000611127 CYP4X1Q8N118 509 aa12.47□□□□□ -0.41
FAM228B-205ENST00000611127 PPRC1Q5VV67 1664 aaKnown RBP12.47□□□□□ -0.41
FAM228B-205ENST00000611127 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
FAM228B-205ENST00000611127 FAM187AA6NFU0 413 aa12.46□□□□□ -0.41
FAM228B-205ENST00000611127 CCNYL3P0C7X3 344 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms