RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SETBP1Q9Y6X0 1596 aa21.31■■□□□ 1
TNIP1-220ENST00000610535 PPRC1Q5VV67 1664 aaKnown RBP21.31■■□□□ 1
TNIP1-220ENST00000610535 GGNBP2Q9H3C7 697 aa21.31■■□□□ 1
TNIP1-220ENST00000610535 MRE11P49959 708 aa21.3■■□□□ 1
TNIP1-220ENST00000610535 EVC2Q86UK5 1308 aa21.3■■□□□ 1
TNIP1-220ENST00000610535 ADGRB1O14514 1584 aa21.3■■□□□ 1
TNIP1-220ENST00000610535 PNNQ9H307 717 aaKnown RBP21.29■■□□□ 1
TNIP1-220ENST00000610535 ANKRD36BQ8N2N9 1353 aa21.29■■□□□ 1
TNIP1-220ENST00000610535 GRPEL1Q9HAV7 217 aa21.28■■□□□ 1
TNIP1-220ENST00000610535 ADGRB3O60242 1522 aa21.28■■□□□ 1
TNIP1-220ENST00000610535 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
TNIP1-220ENST00000610535 CLCN1P35523 988 aa21.28■■□□□ 1
TNIP1-220ENST00000610535 DDIT3P35638 169 aa21.28■■□□□ 1
TNIP1-220ENST00000610535 DDX11L8A8MPP1 907 aa21.28■■□□□ 1
TNIP1-220ENST00000610535 RBM25P49756 843 aaKnown RBP21.27■■□□□ 1
TNIP1-220ENST00000610535 RIPK4P57078 832 aa21.27■■□□□ 1
TNIP1-220ENST00000610535 NUCB1Q02818 461 aa21.27■■□□□ 1
TNIP1-220ENST00000610535 ADGRB2O60241 1585 aa21.27■■□□□ 1
TNIP1-220ENST00000610535 TNPO1Q92973 898 aaKnown RBP21.27■□□□□ 0.99
TNIP1-220ENST00000610535 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
TNIP1-220ENST00000610535 POGZQ7Z3K3 1410 aa21.26■□□□□ 0.99
TNIP1-220ENST00000610535 FOXD4L1Q9NU39 408 aa21.25■□□□□ 0.99
TNIP1-220ENST00000610535 CHD1LQ86WJ1 897 aa21.24■□□□□ 0.99
TNIP1-220ENST00000610535 NSD2O96028 1365 aa21.24■□□□□ 0.99
TNIP1-220ENST00000610535 NPATQ14207 1427 aa21.24■□□□□ 0.99
TNIP1-220ENST00000610535 GAS2L3Q86XJ1 694 aa21.24■□□□□ 0.99
TNIP1-220ENST00000610535 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
TNIP1-220ENST00000610535 HSP90AB1P08238 724 aaKnown RBP21.23■□□□□ 0.99
TNIP1-220ENST00000610535 SNX21Q969T3 373 aa21.23■□□□□ 0.99
TNIP1-220ENST00000610535 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
TNIP1-220ENST00000610535 IPO8O15397 1037 aaKnown RBP21.22■□□□□ 0.99
TNIP1-220ENST00000610535 CD2BP2O95400 341 aaKnown RBP21.22■□□□□ 0.99
TNIP1-220ENST00000610535 STK26Q9P289 416 aa21.22■□□□□ 0.99
TNIP1-220ENST00000610535 A0A1W2PP64 1363 aa21.22■□□□□ 0.99
TNIP1-220ENST00000610535 KIF2CQ99661 725 aa21.21■□□□□ 0.99
TNIP1-220ENST00000610535 PPLO60437 1756 aa21.21■□□□□ 0.99
TNIP1-220ENST00000610535 SRPK2P78362 688 aaKnown RBP21.21■□□□□ 0.99
TNIP1-220ENST00000610535 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
TNIP1-220ENST00000610535 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.99
TNIP1-220ENST00000610535 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.99
TNIP1-220ENST00000610535 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.99
TNIP1-220ENST00000610535 KIF16BQ96L93 1317 aa21.2■□□□□ 0.98
TNIP1-220ENST00000610535 C1orf115Q9H7X2 142 aa21.2■□□□□ 0.98
TNIP1-220ENST00000610535 FYB1O15117 783 aa21.2■□□□□ 0.98
TNIP1-220ENST00000610535 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
TNIP1-220ENST00000610535 IL16Q14005 1332 aa21.19■□□□□ 0.98
TNIP1-220ENST00000610535 MLECQ14165 292 aa21.19■□□□□ 0.98
TNIP1-220ENST00000610535 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
TNIP1-220ENST00000610535 YEATS2Q9ULM3 1422 aa21.19■□□□□ 0.98
TNIP1-220ENST00000610535 FRMPD1Q5SYB0 1578 aa21.18■□□□□ 0.98
TNIP1-220ENST00000610535 RPGRIP1LQ68CZ1 1315 aa21.18■□□□□ 0.98
TNIP1-220ENST00000610535 ESPNB1AK53 854 aa21.18■□□□□ 0.98
TNIP1-220ENST00000610535 LMTK2Q8IWU2 1503 aa21.18■□□□□ 0.98
TNIP1-220ENST00000610535 HSP90AA1P07900 732 aaKnown RBP21.18■□□□□ 0.98
TNIP1-220ENST00000610535 RAB3GAP1Q15042 981 aa21.18■□□□□ 0.98
TNIP1-220ENST00000610535 BMP2KLQ5H9B9 411 aa21.17■□□□□ 0.98
TNIP1-220ENST00000610535 GLI2P10070 1586 aa21.17■□□□□ 0.98
TNIP1-220ENST00000610535 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
TNIP1-220ENST00000610535 GBP4Q96PP9 640 aa21.16■□□□□ 0.98
TNIP1-220ENST00000610535 COL3A1P02461 1466 aaPredicted RBP21.16■□□□□ 0.98
TNIP1-220ENST00000610535 VGFO15240 615 aaPredicted RBP21.15■□□□□ 0.98
TNIP1-220ENST00000610535 CIZ1Q9ULV3 898 aaPredicted RBP21.15■□□□□ 0.98
TNIP1-220ENST00000610535 ZBTB7BO15156 539 aaPredicted RBP21.15■□□□□ 0.98
TNIP1-220ENST00000610535 FBLN1P23142 703 aa21.15■□□□□ 0.98
TNIP1-220ENST00000610535 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
TNIP1-220ENST00000610535 ALDH1L2Q3SY69 923 aa21.14■□□□□ 0.98
TNIP1-220ENST00000610535 TBC1D9Q6ZT07 1266 aa21.14■□□□□ 0.98
TNIP1-220ENST00000610535 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
TNIP1-220ENST00000610535 ISY1Q9ULR0 285 aaKnown RBP21.13■□□□□ 0.97
TNIP1-220ENST00000610535 PPIP5K1Q6PFW1 1433 aa21.13■□□□□ 0.97
TNIP1-220ENST00000610535 IDI1Q13907 227 aa21.13■□□□□ 0.97
TNIP1-220ENST00000610535 MINK1Q8N4C8 1332 aaPredicted RBP21.13■□□□□ 0.97
TNIP1-220ENST00000610535 HECW2Q9P2P5 1572 aa21.13■□□□□ 0.97
TNIP1-220ENST00000610535 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
TNIP1-220ENST00000610535 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
TNIP1-220ENST00000610535 SSFA2P28290 1259 aa21.12■□□□□ 0.97
TNIP1-220ENST00000610535 ARHGEF28Q8N1W1 1705 aaKnown RBP21.11■□□□□ 0.97
TNIP1-220ENST00000610535 K7ELQ4 463 aaPredicted RBP21.11■□□□□ 0.97
TNIP1-220ENST00000610535 SIRT2Q8IXJ6 389 aa21.11■□□□□ 0.97
TNIP1-220ENST00000610535 TSPYL6Q8N831 410 aa21.11■□□□□ 0.97
TNIP1-220ENST00000610535 GAS2L2Q8NHY3 880 aa21.11■□□□□ 0.97
TNIP1-220ENST00000610535 MLH3Q9UHC1 1453 aa21.11■□□□□ 0.97
TNIP1-220ENST00000610535 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
TNIP1-220ENST00000610535 SKOR2Q2VWA4 1001 aaPredicted RBP21.1■□□□□ 0.97
TNIP1-220ENST00000610535 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
TNIP1-220ENST00000610535 GCC1Q96CN9 775 aa21.09■□□□□ 0.97
TNIP1-220ENST00000610535 VAMP4O75379 141 aa21.09■□□□□ 0.97
TNIP1-220ENST00000610535 CAMSAP1Q5T5Y3 1602 aa21.08■□□□□ 0.97
TNIP1-220ENST00000610535 MRPL50Q8N5N7 158 aaKnown RBP21.08■□□□□ 0.96
TNIP1-220ENST00000610535 PHACTR3Q96KR7 559 aa21.08■□□□□ 0.96
TNIP1-220ENST00000610535 FCHSD2O94868 740 aa21.07■□□□□ 0.96
TNIP1-220ENST00000610535 HSP90AA2PQ14568 343 aaPredicted RBP21.07■□□□□ 0.96
TNIP1-220ENST00000610535 HMOX1P09601 288 aa21.07■□□□□ 0.96
TNIP1-220ENST00000610535 ABCC3O15438 1527 aa21.07■□□□□ 0.96
TNIP1-220ENST00000610535 PRAM1Q96QH2 718 aa21.06■□□□□ 0.96
TNIP1-220ENST00000610535 CFAP74Q9C0B2 1584 aa21.05■□□□□ 0.96
TNIP1-220ENST00000610535 PNPLA6Q8IY17 1366 aa21.05■□□□□ 0.96
TNIP1-220ENST00000610535 BRPF1P55201 1214 aaPredicted RBP21.05■□□□□ 0.96
TNIP1-220ENST00000610535 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
TNIP1-220ENST00000610535 CABP1Q9NZU7 370 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 1203.4 ms