RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TPRNQ4KMQ1 711 aa25.56■■□□□ 1.68
SSBP3-216ENST00000610401 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
SSBP3-216ENST00000610401 ZRANB1Q9UGI0 708 aa25.55■■□□□ 1.68
SSBP3-216ENST00000610401 GAS2L3Q86XJ1 694 aa25.54■■□□□ 1.68
SSBP3-216ENST00000610401 VGFO15240 615 aaPredicted RBP25.54■■□□□ 1.68
SSBP3-216ENST00000610401 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
SSBP3-216ENST00000610401 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
SSBP3-216ENST00000610401 GRPEL1Q9HAV7 217 aa25.54■■□□□ 1.68
SSBP3-216ENST00000610401 HDAC1Q13547 482 aaPredicted RBP25.53■■□□□ 1.68
SSBP3-216ENST00000610401 WAPLQ7Z5K2 1190 aa25.53■■□□□ 1.68
SSBP3-216ENST00000610401 NPM1P06748 294 aaKnown RBP eCLIP25.53■■□□□ 1.68
SSBP3-216ENST00000610401 SMC5Q8IY18 1101 aa25.53■■□□□ 1.68
SSBP3-216ENST00000610401 NUTM2FA1L443 756 aa25.52■■□□□ 1.68
SSBP3-216ENST00000610401 C16orf71Q8IYS4 520 aaPredicted RBP25.52■■□□□ 1.68
SSBP3-216ENST00000610401 NPATQ14207 1427 aa25.51■■□□□ 1.67
SSBP3-216ENST00000610401 ZBTB7CA1YPR0 619 aa25.51■■□□□ 1.67
SSBP3-216ENST00000610401 EMILIN1Q9Y6C2 1016 aa25.51■■□□□ 1.67
SSBP3-216ENST00000610401 SSFA2P28290 1259 aa25.51■■□□□ 1.67
SSBP3-216ENST00000610401 NUCB1Q02818 461 aa25.51■■□□□ 1.67
SSBP3-216ENST00000610401 TRIM44Q96DX7 344 aaPredicted RBP25.5■■□□□ 1.67
SSBP3-216ENST00000610401 CHAMP1Q96JM3 812 aa25.5■■□□□ 1.67
SSBP3-216ENST00000610401 IQSEC2Q5JU85 1478 aa25.5■■□□□ 1.67
SSBP3-216ENST00000610401 ANKRD36BQ8N2N9 1353 aa25.5■■□□□ 1.67
SSBP3-216ENST00000610401 KRT24Q2M2I5 525 aa25.5■■□□□ 1.67
SSBP3-216ENST00000610401 FBXO31Q5XUX0 539 aaPredicted RBP25.49■■□□□ 1.67
SSBP3-216ENST00000610401 TBC1D9Q6ZT07 1266 aa25.49■■□□□ 1.67
SSBP3-216ENST00000610401 TERF2IPQ9NYB0 399 aa25.49■■□□□ 1.67
SSBP3-216ENST00000610401 NCKAP5LQ9HCH0 1330 aa25.49■■□□□ 1.67
SSBP3-216ENST00000610401 CDK19Q9BWU1 502 aa25.48■■□□□ 1.67
SSBP3-216ENST00000610401 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
SSBP3-216ENST00000610401 TET3O43151 1660 aa25.48■■□□□ 1.67
SSBP3-216ENST00000610401 MROH2AA6NES4 1674 aa25.47■■□□□ 1.67
SSBP3-216ENST00000610401 AAMPQ13685 434 aa25.47■■□□□ 1.67
SSBP3-216ENST00000610401 SHPRHQ149N8 1683 aa25.47■■□□□ 1.67
SSBP3-216ENST00000610401 FSD2A1L4K1 749 aa25.46■■□□□ 1.67
SSBP3-216ENST00000610401 GAS2L2Q8NHY3 880 aa25.46■■□□□ 1.67
SSBP3-216ENST00000610401 ERBB4Q15303 1308 aa25.46■■□□□ 1.67
SSBP3-216ENST00000610401 KIF16BQ96L93 1317 aa25.46■■□□□ 1.67
SSBP3-216ENST00000610401 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
SSBP3-216ENST00000610401 ZNF692Q9BU19 519 aaPredicted RBP25.46■■□□□ 1.67
SSBP3-216ENST00000610401 SMARCA5O60264 1052 aaPredicted RBP25.44■■□□□ 1.66
SSBP3-216ENST00000610401 MRE11P49959 708 aa25.44■■□□□ 1.66
SSBP3-216ENST00000610401 MLECQ14165 292 aa25.44■■□□□ 1.66
SSBP3-216ENST00000610401 MYOM2P54296 1465 aa25.44■■□□□ 1.66
SSBP3-216ENST00000610401 DDX11L8A8MPP1 907 aa25.44■■□□□ 1.66
SSBP3-216ENST00000610401 FOXD4L6Q3SYB3 417 aaPredicted RBP25.44■■□□□ 1.66
SSBP3-216ENST00000610401 FOXD4L3Q6VB84 417 aaPredicted RBP25.44■■□□□ 1.66
SSBP3-216ENST00000610401 OTUD7AQ8TE49 926 aaPredicted RBP25.44■■□□□ 1.66
SSBP3-216ENST00000610401 NOL8Q76FK4 1167 aaKnown RBP25.44■■□□□ 1.66
SSBP3-216ENST00000610401 SIRT2Q8IXJ6 389 aa25.43■■□□□ 1.66
SSBP3-216ENST00000610401 C8orf58Q8NAV2 365 aa25.42■■□□□ 1.66
SSBP3-216ENST00000610401 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
SSBP3-216ENST00000610401 ZBTB7BO15156 539 aaPredicted RBP25.42■■□□□ 1.66
SSBP3-216ENST00000610401 DDX49Q9Y6V7 483 aaKnown RBP25.41■■□□□ 1.66
SSBP3-216ENST00000610401 KIF1BO60333 1816 aa25.41■■□□□ 1.66
SSBP3-216ENST00000610401 GBP4Q96PP9 640 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 KIF2CQ99661 725 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 PKP1Q13835 747 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 NME9Q86XW9 330 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 MBIPQ9NS73 344 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 MCTP1Q6DN14 999 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 ASXL2Q76L83 1435 aa25.4■■□□□ 1.66
SSBP3-216ENST00000610401 VAMP4O75379 141 aa25.39■■□□□ 1.66
SSBP3-216ENST00000610401 TWISTNBQ3B726 338 aaPredicted RBP25.39■■□□□ 1.66
SSBP3-216ENST00000610401 POLKQ9UBT6 870 aa25.39■■□□□ 1.65
SSBP3-216ENST00000610401 ARID3AQ99856 593 aa25.38■■□□□ 1.65
SSBP3-216ENST00000610401 MIS18AQ9NYP9 233 aa25.38■■□□□ 1.65
SSBP3-216ENST00000610401 PPRC1Q5VV67 1664 aaKnown RBP25.38■■□□□ 1.65
SSBP3-216ENST00000610401 SHROOM2Q13796 1616 aa25.38■■□□□ 1.65
SSBP3-216ENST00000610401 ESPNB1AK53 854 aa25.38■■□□□ 1.65
SSBP3-216ENST00000610401 QRICH2Q9H0J4 1663 aa25.37■■□□□ 1.65
SSBP3-216ENST00000610401 TSHZ3Q63HK5 1081 aa25.37■■□□□ 1.65
SSBP3-216ENST00000610401 K7ELQ4 463 aaPredicted RBP25.36■■□□□ 1.65
SSBP3-216ENST00000610401 EFCAB6Q5THR3 1501 aa25.36■■□□□ 1.65
SSBP3-216ENST00000610401 PPIP5K1Q6PFW1 1433 aa25.36■■□□□ 1.65
SSBP3-216ENST00000610401 RBM25P49756 843 aaKnown RBP25.36■■□□□ 1.65
SSBP3-216ENST00000610401 TULP4Q9NRJ4 1543 aa25.35■■□□□ 1.65
SSBP3-216ENST00000610401 VIRMAQ69YN4 1812 aaKnown RBP25.35■■□□□ 1.65
SSBP3-216ENST00000610401 CT47B1P0C2W7 299 aaPredicted RBP25.35■■□□□ 1.65
SSBP3-216ENST00000610401 MRPL50Q8N5N7 158 aaKnown RBP25.35■■□□□ 1.65
SSBP3-216ENST00000610401 BMP2KLQ5H9B9 411 aa25.34■■□□□ 1.65
SSBP3-216ENST00000610401 SLC4A10Q6U841 1118 aa25.34■■□□□ 1.65
SSBP3-216ENST00000610401 GSPT1P15170 499 aaKnown RBP25.34■■□□□ 1.65
SSBP3-216ENST00000610401 CAVIN1Q6NZI2 390 aaKnown RBP25.34■■□□□ 1.65
SSBP3-216ENST00000610401 UBE2Q2Q8WVN8 375 aa25.33■■□□□ 1.65
SSBP3-216ENST00000610401 MROH1Q8NDA8 1641 aa25.33■■□□□ 1.64
SSBP3-216ENST00000610401 NECTIN2Q92692 538 aa25.32■■□□□ 1.64
SSBP3-216ENST00000610401 FCHSD2O94868 740 aa25.32■■□□□ 1.64
SSBP3-216ENST00000610401 RAB3GAP1Q15042 981 aa25.32■■□□□ 1.64
SSBP3-216ENST00000610401 PLPPR3Q6T4P5 718 aa25.32■■□□□ 1.64
SSBP3-216ENST00000610401 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
SSBP3-216ENST00000610401 MCM10Q7L590 875 aa25.31■■□□□ 1.64
SSBP3-216ENST00000610401 CLCN1P35523 988 aa25.3■■□□□ 1.64
SSBP3-216ENST00000610401 NFE2L2Q16236 605 aa25.3■■□□□ 1.64
SSBP3-216ENST00000610401 AEBP1Q8IUX7 1158 aa25.3■■□□□ 1.64
SSBP3-216ENST00000610401 MPNDQ8N594 471 aa25.3■■□□□ 1.64
SSBP3-216ENST00000610401 ADGRB1O14514 1584 aa25.3■■□□□ 1.64
SSBP3-216ENST00000610401 ZGPATQ8N5A5 531 aaKnown RBP25.3■■□□□ 1.64
SSBP3-216ENST00000610401 RBM27Q9P2N5 1060 aaKnown RBP25.3■■□□□ 1.64
SSBP3-216ENST00000610401 DEPDC5O75140 1603 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms