RNA–Protein interactions for RNA: ENST00000610140.5

NT5C3A-213, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NT5C3A, Length 1,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-213ENST00000610140 NEUROD2Q15784 382 aa18.77■□□□□ 0.6
NT5C3A-213ENST00000610140 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.6
NT5C3A-213ENST00000610140 ZMYM3Q14202 1370 aa18.77■□□□□ 0.6
NT5C3A-213ENST00000610140 UBR1Q8IWV7 1749 aa18.76■□□□□ 0.59
NT5C3A-213ENST00000610140 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
NT5C3A-213ENST00000610140 CPS1P31327 1500 aa18.75■□□□□ 0.59
NT5C3A-213ENST00000610140 CANXP27824 592 aaKnown RBP18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 HDGFP51858 240 aaKnown RBP18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 CABP1Q9NZU7 370 aa18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 PNPLA6Q8IY17 1366 aa18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 TECPR2O15040 1411 aa18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 MON2Q7Z3U7 1717 aa18.74■□□□□ 0.59
NT5C3A-213ENST00000610140 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 ITSN1Q15811 1721 aa18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 TNRQ92752 1358 aa18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 AAMPQ13685 434 aa18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 PLEKHF1Q96S99 279 aa18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 PNNQ9H307 717 aaKnown RBP18.73■□□□□ 0.59
NT5C3A-213ENST00000610140 SIRT1Q96EB6 747 aa18.72■□□□□ 0.59
NT5C3A-213ENST00000610140 VIRMAQ69YN4 1812 aaKnown RBP18.71■□□□□ 0.59
NT5C3A-213ENST00000610140 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
NT5C3A-213ENST00000610140 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
NT5C3A-213ENST00000610140 WAPLQ7Z5K2 1190 aa18.71■□□□□ 0.59
NT5C3A-213ENST00000610140 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.59
NT5C3A-213ENST00000610140 ZBTB47Q9UFB7 747 aaPredicted RBP18.7■□□□□ 0.58
NT5C3A-213ENST00000610140 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
NT5C3A-213ENST00000610140 EDC4Q6P2E9 1401 aaKnown RBP18.7■□□□□ 0.58
NT5C3A-213ENST00000610140 METP08581 1390 aa18.7■□□□□ 0.58
NT5C3A-213ENST00000610140 DIAPH1O60610 1272 aaKnown RBP18.69■□□□□ 0.58
NT5C3A-213ENST00000610140 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
NT5C3A-213ENST00000610140 IL16Q14005 1332 aa18.69■□□□□ 0.58
NT5C3A-213ENST00000610140 PPIP5K1Q6PFW1 1433 aa18.68■□□□□ 0.58
NT5C3A-213ENST00000610140 WASLO00401 505 aaPredicted RBP18.68■□□□□ 0.58
NT5C3A-213ENST00000610140 LRRC7Q96NW7 1537 aa18.67■□□□□ 0.58
NT5C3A-213ENST00000610140 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
NT5C3A-213ENST00000610140 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
NT5C3A-213ENST00000610140 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 C3P01024 1663 aa18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 SKAP1Q86WV1 359 aa18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 PANK1Q8TE04 598 aa18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
NT5C3A-213ENST00000610140 NPM2Q86SE8 214 aaKnown RBP18.65■□□□□ 0.58
NT5C3A-213ENST00000610140 COG6Q9Y2V7 657 aa18.65■□□□□ 0.58
NT5C3A-213ENST00000610140 FAM161AQ3B820 660 aa18.64■□□□□ 0.57
NT5C3A-213ENST00000610140 TRIM35Q9UPQ4 493 aa18.64■□□□□ 0.57
NT5C3A-213ENST00000610140 CDK12Q9NYV4 1490 aaPredicted RBP18.64■□□□□ 0.57
NT5C3A-213ENST00000610140 FCHSD2O94868 740 aa18.63■□□□□ 0.57
NT5C3A-213ENST00000610140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
NT5C3A-213ENST00000610140 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
NT5C3A-213ENST00000610140 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
NT5C3A-213ENST00000610140 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
NT5C3A-213ENST00000610140 POLKQ9UBT6 870 aa18.62■□□□□ 0.57
NT5C3A-213ENST00000610140 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
NT5C3A-213ENST00000610140 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
NT5C3A-213ENST00000610140 PMFBP1Q8TBY8 1022 aa18.61■□□□□ 0.57
NT5C3A-213ENST00000610140 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
NT5C3A-213ENST00000610140 IGHDP01880 384 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 NUDT16Q96DE0 195 aaKnown RBP18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 PLEKHG1Q9ULL1 1385 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 NEFMP07197 916 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 RIPK4P57078 832 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
NT5C3A-213ENST00000610140 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
NT5C3A-213ENST00000610140 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
NT5C3A-213ENST00000610140 C8orf34Q49A92 452 aa18.58■□□□□ 0.57
NT5C3A-213ENST00000610140 TSR2Q969E8 191 aaKnown RBP18.58■□□□□ 0.57
NT5C3A-213ENST00000610140 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.57
NT5C3A-213ENST00000610140 RLBP1P12271 317 aa18.57■□□□□ 0.56
NT5C3A-213ENST00000610140 RGS3P49796 1198 aa18.57■□□□□ 0.56
NT5C3A-213ENST00000610140 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
NT5C3A-213ENST00000610140 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
NT5C3A-213ENST00000610140 DLG5Q8TDM6 1919 aa18.56■□□□□ 0.56
NT5C3A-213ENST00000610140 MVPQ14764 893 aaKnown RBP18.56■□□□□ 0.56
NT5C3A-213ENST00000610140 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
NT5C3A-213ENST00000610140 FER1L4A9Z1Z3 1794 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 PRKAR2BP31323 418 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 NME9Q86XW9 330 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 COG3Q96JB2 828 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
NT5C3A-213ENST00000610140 PPM1GO15355 546 aaPredicted RBP18.54■□□□□ 0.56
NT5C3A-213ENST00000610140 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
NT5C3A-213ENST00000610140 TNNQ9UQP3 1299 aa18.54■□□□□ 0.56
NT5C3A-213ENST00000610140 SLIT1O75093 1534 aa18.54■□□□□ 0.56
NT5C3A-213ENST00000610140 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
NT5C3A-213ENST00000610140 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
NT5C3A-213ENST00000610140 IL13P35225 146 aa18.53■□□□□ 0.56
NT5C3A-213ENST00000610140 CALD1Q05682 793 aaKnown RBP18.53■□□□□ 0.56
NT5C3A-213ENST00000610140 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
NT5C3A-213ENST00000610140 RWDD1Q9H446 243 aaPredicted RBP18.53■□□□□ 0.56
NT5C3A-213ENST00000610140 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
NT5C3A-213ENST00000610140 EMILIN1Q9Y6C2 1016 aa18.52■□□□□ 0.56
NT5C3A-213ENST00000610140 DIP2AQ14689 1571 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms