RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 COL3A1P02461 1466 aaPredicted RBP28.14■■■□□ 2.1
SHANK2-220ENST00000608988 DDIT3P35638 169 aa28.14■■■□□ 2.1
SHANK2-220ENST00000608988 ZNF692Q9BU19 519 aaPredicted RBP28.14■■■□□ 2.1
SHANK2-220ENST00000608988 ANKRD26Q9UPS8 1709 aa28.14■■■□□ 2.09
SHANK2-220ENST00000608988 PLEKHF1Q96S99 279 aa28.13■■■□□ 2.09
SHANK2-220ENST00000608988 PNNQ9H307 717 aaKnown RBP28.12■■■□□ 2.09
SHANK2-220ENST00000608988 NPATQ14207 1427 aa28.12■■■□□ 2.09
SHANK2-220ENST00000608988 TMPOP42166 694 aaKnown RBP28.11■■■□□ 2.09
SHANK2-220ENST00000608988 EXOSC9Q06265 439 aaKnown RBP28.11■■■□□ 2.09
SHANK2-220ENST00000608988 CD109Q6YHK3 1445 aa28.11■■■□□ 2.09
SHANK2-220ENST00000608988 HECW2Q9P2P5 1572 aa28.11■■■□□ 2.09
SHANK2-220ENST00000608988 ITPRIPQ8IWB1 547 aa28.1■■■□□ 2.09
SHANK2-220ENST00000608988 SSH1Q8WYL5 1049 aa28.1■■■□□ 2.09
SHANK2-220ENST00000608988 ALDH1L2Q3SY69 923 aa28.1■■■□□ 2.09
SHANK2-220ENST00000608988 CHMP4BQ9H444 224 aaKnown RBP28.1■■■□□ 2.09
SHANK2-220ENST00000608988 ZBTB40Q9NUA8 1239 aa28.1■■■□□ 2.09
SHANK2-220ENST00000608988 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
SHANK2-220ENST00000608988 PIK3C2BO00750 1634 aa28.09■■■□□ 2.09
SHANK2-220ENST00000608988 NUCB1Q02818 461 aa28.09■■■□□ 2.09
SHANK2-220ENST00000608988 ZNF428Q96B54 188 aa28.09■■■□□ 2.09
SHANK2-220ENST00000608988 SKOR2Q2VWA4 1001 aaPredicted RBP28.08■■■□□ 2.09
SHANK2-220ENST00000608988 TRIM35Q9UPQ4 493 aa28.08■■■□□ 2.09
SHANK2-220ENST00000608988 CFAP74Q9C0B2 1584 aa28.07■■■□□ 2.08
SHANK2-220ENST00000608988 BRPF1P55201 1214 aaPredicted RBP28.06■■■□□ 2.08
SHANK2-220ENST00000608988 TSR2Q969E8 191 aaKnown RBP28.06■■■□□ 2.08
SHANK2-220ENST00000608988 CAMSAP1Q5T5Y3 1602 aa28.06■■■□□ 2.08
SHANK2-220ENST00000608988 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
SHANK2-220ENST00000608988 GBP4Q96PP9 640 aa28.05■■■□□ 2.08
SHANK2-220ENST00000608988 SPRYD3Q8NCJ5 442 aa28.04■■■□□ 2.08
SHANK2-220ENST00000608988 GRPEL1Q9HAV7 217 aa28.04■■■□□ 2.08
SHANK2-220ENST00000608988 NOB1Q9ULX3 412 aaKnown RBP28.04■■■□□ 2.08
SHANK2-220ENST00000608988 CDC42BPGQ6DT37 1551 aa28.03■■■□□ 2.08
SHANK2-220ENST00000608988 BMP2KLQ5H9B9 411 aa28.03■■■□□ 2.08
SHANK2-220ENST00000608988 NEXMIFQ5QGS0 1516 aa28.03■■■□□ 2.08
SHANK2-220ENST00000608988 VGFO15240 615 aaPredicted RBP28.02■■■□□ 2.08
SHANK2-220ENST00000608988 TMEM57Q8N5G2 664 aa28.02■■■□□ 2.08
SHANK2-220ENST00000608988 ABCC3O15438 1527 aa28.02■■■□□ 2.08
SHANK2-220ENST00000608988 MLH3Q9UHC1 1453 aa28.02■■■□□ 2.08
SHANK2-220ENST00000608988 ZFYVE9O95405 1425 aa28.02■■■□□ 2.08
SHANK2-220ENST00000608988 PPIP5K1Q6PFW1 1433 aa28.02■■■□□ 2.08
SHANK2-220ENST00000608988 GZF1Q9H116 711 aaPredicted RBP28.02■■■□□ 2.08
SHANK2-220ENST00000608988 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.07
SHANK2-220ENST00000608988 FRMPD1Q5SYB0 1578 aa28■■■□□ 2.07
SHANK2-220ENST00000608988 CLTCQ00610 1675 aaKnown RBP28■■■□□ 2.07
SHANK2-220ENST00000608988 CHD1LQ86WJ1 897 aa28■■■□□ 2.07
SHANK2-220ENST00000608988 PANK2Q9BZ23 570 aa28■■■□□ 2.07
SHANK2-220ENST00000608988 RIMBP3CA6NJZ7 1639 aa27.99■■■□□ 2.07
SHANK2-220ENST00000608988 RIMBP3BA6NNM3 1639 aa27.99■■■□□ 2.07
SHANK2-220ENST00000608988 RIMBP3Q9UFD9 1639 aa27.99■■■□□ 2.07
SHANK2-220ENST00000608988 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
SHANK2-220ENST00000608988 GCC1Q96CN9 775 aa27.99■■■□□ 2.07
SHANK2-220ENST00000608988 A0A1W2PP64 1363 aa27.98■■■□□ 2.07
SHANK2-220ENST00000608988 RAB3GAP1Q15042 981 aa27.98■■■□□ 2.07
SHANK2-220ENST00000608988 PNPLA6Q8IY17 1366 aa27.98■■■□□ 2.07
SHANK2-220ENST00000608988 PIK3R4Q99570 1358 aa27.96■■■□□ 2.07
SHANK2-220ENST00000608988 U2SURPO15042 1029 aaKnown RBP27.96■■■□□ 2.07
SHANK2-220ENST00000608988 HSP90AB1P08238 724 aaKnown RBP27.96■■■□□ 2.07
SHANK2-220ENST00000608988 ARHGAP45Q92619 1136 aa27.95■■■□□ 2.07
SHANK2-220ENST00000608988 TNPO1Q92973 898 aaKnown RBP27.95■■■□□ 2.07
SHANK2-220ENST00000608988 CFAP44Q96MT7 982 aa27.95■■■□□ 2.06
SHANK2-220ENST00000608988 POGZQ7Z3K3 1410 aa27.94■■■□□ 2.06
SHANK2-220ENST00000608988 RIPK4P57078 832 aa27.94■■■□□ 2.06
SHANK2-220ENST00000608988 TERF2IPQ9NYB0 399 aa27.94■■■□□ 2.06
SHANK2-220ENST00000608988 ASXL2Q76L83 1435 aa27.93■■■□□ 2.06
SHANK2-220ENST00000608988 CLEC17AQ6ZS10 378 aa27.92■■■□□ 2.06
SHANK2-220ENST00000608988 NAP1L5Q96NT1 182 aaPredicted RBP27.92■■■□□ 2.06
SHANK2-220ENST00000608988 PTCH1Q13635 1447 aa27.91■■■□□ 2.06
SHANK2-220ENST00000608988 ESPNB1AK53 854 aa27.91■■■□□ 2.06
SHANK2-220ENST00000608988 CABP2Q9NPB3 220 aa27.91■■■□□ 2.06
SHANK2-220ENST00000608988 DIAPH1O60610 1272 aaKnown RBP27.91■■■□□ 2.06
SHANK2-220ENST00000608988 GLIPR1L2Q4G1C9 344 aa27.91■■■□□ 2.06
SHANK2-220ENST00000608988 IBTKQ9P2D0 1353 aaPredicted RBP27.9■■■□□ 2.06
SHANK2-220ENST00000608988 FCHSD2O94868 740 aa27.9■■■□□ 2.06
SHANK2-220ENST00000608988 CALD1Q05682 793 aaKnown RBP27.9■■■□□ 2.06
SHANK2-220ENST00000608988 ARHGAP31Q2M1Z3 1444 aa27.9■■■□□ 2.06
SHANK2-220ENST00000608988 ARXQ96QS3 562 aa27.89■■■□□ 2.05
SHANK2-220ENST00000608988 LNPKQ9C0E8 428 aa27.89■■■□□ 2.05
SHANK2-220ENST00000608988 SIGLEC1Q9BZZ2 1709 aa27.88■■■□□ 2.05
SHANK2-220ENST00000608988 KIF20BQ96Q89 1820 aa27.88■■■□□ 2.05
SHANK2-220ENST00000608988 K7ELQ4 463 aaPredicted RBP27.87■■■□□ 2.05
SHANK2-220ENST00000608988 KIF2CQ99661 725 aa27.87■■■□□ 2.05
SHANK2-220ENST00000608988 CD163L1Q9NR16 1453 aa27.86■■■□□ 2.05
SHANK2-220ENST00000608988 FYB1O15117 783 aa27.86■■■□□ 2.05
SHANK2-220ENST00000608988 FAM135BQ49AJ0 1406 aa27.86■■■□□ 2.05
SHANK2-220ENST00000608988 TRIM44Q96DX7 344 aaPredicted RBP27.86■■■□□ 2.05
SHANK2-220ENST00000608988 GOLGA6L22H0YM25 854 aa27.85■■■□□ 2.05
SHANK2-220ENST00000608988 RRP9O43818 475 aaKnown RBP27.85■■■□□ 2.05
SHANK2-220ENST00000608988 HSP90AA1P07900 732 aaKnown RBP27.85■■■□□ 2.05
SHANK2-220ENST00000608988 LRRC7Q96NW7 1537 aa27.85■■■□□ 2.05
SHANK2-220ENST00000608988 ZBTB7BO15156 539 aaPredicted RBP27.85■■■□□ 2.05
SHANK2-220ENST00000608988 GGNBP2Q9H3C7 697 aa27.85■■■□□ 2.05
SHANK2-220ENST00000608988 PTPRMP28827 1452 aa27.84■■■□□ 2.05
SHANK2-220ENST00000608988 KIF24Q5T7B8 1368 aa27.84■■■□□ 2.05
SHANK2-220ENST00000608988 CFAP65Q6ZU64 1925 aaKnown RBP27.83■■■□□ 2.05
SHANK2-220ENST00000608988 SRPK2P78362 688 aaKnown RBP27.83■■■□□ 2.04
SHANK2-220ENST00000608988 HDGFL2Q7Z4V5 671 aaPredicted RBP27.81■■■□□ 2.04
SHANK2-220ENST00000608988 CCDC173Q0VFZ6 552 aa27.81■■■□□ 2.04
SHANK2-220ENST00000608988 ANKRD45Q5TZF3 282 aa27.81■■■□□ 2.04
SHANK2-220ENST00000608988 MRPL50Q8N5N7 158 aaKnown RBP27.81■■■□□ 2.04
SHANK2-220ENST00000608988 GGT6Q6P531 493 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms