RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
HCG18-242ENST00000602319 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
HCG18-242ENST00000602319 MFAP1P55081 439 aaKnown RBP12.44□□□□□ -0.42
HCG18-242ENST00000602319 NUCB1Q02818 461 aa12.44□□□□□ -0.42
HCG18-242ENST00000602319 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
HCG18-242ENST00000602319 GLI2P10070 1586 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 GBP4Q96PP9 640 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 IL16Q14005 1332 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
HCG18-242ENST00000602319 OFD1O75665 1012 aa12.42□□□□□ -0.42
HCG18-242ENST00000602319 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
HCG18-242ENST00000602319 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
HCG18-242ENST00000602319 TRIM27P14373 513 aa12.41□□□□□ -0.42
HCG18-242ENST00000602319 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
HCG18-242ENST00000602319 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
HCG18-242ENST00000602319 ADGRF5Q8IZF2 1346 aa12.41□□□□□ -0.42
HCG18-242ENST00000602319 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
HCG18-242ENST00000602319 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 KIF20BQ96Q89 1820 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 ZNF445P59923 1031 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 ZSCAN30Q86W11 494 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
HCG18-242ENST00000602319 KLHL40Q2TBA0 621 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 CFAP70Q5T0N1 1121 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
HCG18-242ENST00000602319 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 PTCH1Q13635 1447 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 ATF7IPQ6VMQ6 1270 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 TRIM44Q96DX7 344 aaPredicted RBP12.39□□□□□ -0.43
HCG18-242ENST00000602319 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
HCG18-242ENST00000602319 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
HCG18-242ENST00000602319 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
HCG18-242ENST00000602319 CAMSAP1Q5T5Y3 1602 aa12.38□□□□□ -0.43
HCG18-242ENST00000602319 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
HCG18-242ENST00000602319 CYP2E1P05181 493 aaPredicted RBP12.37□□□□□ -0.43
HCG18-242ENST00000602319 RIPK4P57078 832 aa12.37□□□□□ -0.43
HCG18-242ENST00000602319 ARXQ96QS3 562 aa12.37□□□□□ -0.43
HCG18-242ENST00000602319 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
HCG18-242ENST00000602319 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
HCG18-242ENST00000602319 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.37□□□□□ -0.43
HCG18-242ENST00000602319 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
HCG18-242ENST00000602319 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
HCG18-242ENST00000602319 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
HCG18-242ENST00000602319 HECW2Q9P2P5 1572 aa12.36□□□□□ -0.43
HCG18-242ENST00000602319 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
HCG18-242ENST00000602319 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
HCG18-242ENST00000602319 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
HCG18-242ENST00000602319 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
HCG18-242ENST00000602319 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
HCG18-242ENST00000602319 MTHFSP49914 203 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 CHD1LQ86WJ1 897 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 PRDM4Q9UKN5 801 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
HCG18-242ENST00000602319 AK9Q5TCS8 1911 aa12.35□□□□□ -0.43
HCG18-242ENST00000602319 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
HCG18-242ENST00000602319 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
HCG18-242ENST00000602319 NOL7Q9UMY1 257 aaKnown RBP12.34□□□□□ -0.43
HCG18-242ENST00000602319 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
HCG18-242ENST00000602319 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
HCG18-242ENST00000602319 NEXMIFQ5QGS0 1516 aa12.33□□□□□ -0.44
HCG18-242ENST00000602319 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
HCG18-242ENST00000602319 EXOSC9Q06265 439 aaKnown RBP12.33□□□□□ -0.44
HCG18-242ENST00000602319 PNPLA6Q8IY17 1366 aa12.33□□□□□ -0.44
HCG18-242ENST00000602319 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
HCG18-242ENST00000602319 SIGLEC1Q9BZZ2 1709 aa12.33□□□□□ -0.44
HCG18-242ENST00000602319 FBLN2P98095 1184 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 GCC1Q96CN9 775 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
HCG18-242ENST00000602319 SSFA2P28290 1259 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 ASXL2Q76L83 1435 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 ITPRIPQ8IWB1 547 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
HCG18-242ENST00000602319 ABCC3O15438 1527 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 CD163L1Q9NR16 1453 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 MCM5P33992 734 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 TMPOP42166 694 aaKnown RBP12.31□□□□□ -0.44
HCG18-242ENST00000602319 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
HCG18-242ENST00000602319 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 TBC1D9Q6ZT07 1266 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
HCG18-242ENST00000602319 FAM135BQ49AJ0 1406 aa12.3□□□□□ -0.44
HCG18-242ENST00000602319 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
HCG18-242ENST00000602319 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
HCG18-242ENST00000602319 IPO8O15397 1037 aaKnown RBP12.29□□□□□ -0.44
HCG18-242ENST00000602319 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
HCG18-242ENST00000602319 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
HCG18-242ENST00000602319 GOLGA6L22H0YM25 854 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms