RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 HSP90AA1P07900 732 aaKnown RBP23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 SKOR2Q2VWA4 1001 aaPredicted RBP23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 TSR2Q969E8 191 aaKnown RBP23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 ANKRD36BQ8N2N9 1353 aa23.4■■□□□ 1.34
ARHGEF1-221ENST00000600387 ESPNB1AK53 854 aa23.39■■□□□ 1.34
ARHGEF1-221ENST00000600387 SSH1Q8WYL5 1049 aa23.39■■□□□ 1.34
ARHGEF1-221ENST00000600387 ABCC11Q96J66 1382 aa23.39■■□□□ 1.34
ARHGEF1-221ENST00000600387 IL16Q14005 1332 aa23.38■■□□□ 1.33
ARHGEF1-221ENST00000600387 ZBTB40Q9NUA8 1239 aa23.38■■□□□ 1.33
ARHGEF1-221ENST00000600387 RRP9O43818 475 aaKnown RBP23.37■■□□□ 1.33
ARHGEF1-221ENST00000600387 NUCB1Q02818 461 aa23.37■■□□□ 1.33
ARHGEF1-221ENST00000600387 TNPO1Q92973 898 aaKnown RBP23.37■■□□□ 1.33
ARHGEF1-221ENST00000600387 IPO8O15397 1037 aaKnown RBP23.36■■□□□ 1.33
ARHGEF1-221ENST00000600387 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
ARHGEF1-221ENST00000600387 KIF16BQ96L93 1317 aa23.36■■□□□ 1.33
ARHGEF1-221ENST00000600387 RAB3GAP1Q15042 981 aa23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 TRIM44Q96DX7 344 aaPredicted RBP23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 HSP90AB1P08238 724 aaKnown RBP23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 TMPOP42166 694 aaKnown RBP23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 PLEKHF1Q96S99 279 aa23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 CD109Q6YHK3 1445 aa23.35■■□□□ 1.33
ARHGEF1-221ENST00000600387 TMEM57Q8N5G2 664 aa23.34■■□□□ 1.33
ARHGEF1-221ENST00000600387 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
ARHGEF1-221ENST00000600387 EVC2Q86UK5 1308 aa23.34■■□□□ 1.33
ARHGEF1-221ENST00000600387 HSP90AA2PQ14568 343 aaPredicted RBP23.34■■□□□ 1.33
ARHGEF1-221ENST00000600387 TRIM35Q9UPQ4 493 aa23.33■■□□□ 1.33
ARHGEF1-221ENST00000600387 ARHGEF28Q8N1W1 1705 aaKnown RBP23.32■■□□□ 1.32
ARHGEF1-221ENST00000600387 BMP2KLQ5H9B9 411 aa23.32■■□□□ 1.32
ARHGEF1-221ENST00000600387 GLI2P10070 1586 aa23.31■■□□□ 1.32
ARHGEF1-221ENST00000600387 CHD1LQ86WJ1 897 aa23.31■■□□□ 1.32
ARHGEF1-221ENST00000600387 RPGRIP1LQ68CZ1 1315 aa23.31■■□□□ 1.32
ARHGEF1-221ENST00000600387 TULP4Q9NRJ4 1543 aa23.31■■□□□ 1.32
ARHGEF1-221ENST00000600387 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
ARHGEF1-221ENST00000600387 COL3A1P02461 1466 aaPredicted RBP23.29■■□□□ 1.32
ARHGEF1-221ENST00000600387 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
ARHGEF1-221ENST00000600387 ALDH1L2Q3SY69 923 aa23.29■■□□□ 1.32
ARHGEF1-221ENST00000600387 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
ARHGEF1-221ENST00000600387 LNPKQ9C0E8 428 aa23.29■■□□□ 1.32
ARHGEF1-221ENST00000600387 KIDINS220Q9ULH0 1771 aa23.28■■□□□ 1.32
ARHGEF1-221ENST00000600387 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
ARHGEF1-221ENST00000600387 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
ARHGEF1-221ENST00000600387 GAS2L3Q86XJ1 694 aa23.28■■□□□ 1.32
ARHGEF1-221ENST00000600387 CFAP65Q6ZU64 1925 aaKnown RBP23.27■■□□□ 1.32
ARHGEF1-221ENST00000600387 KIF2CQ99661 725 aa23.26■■□□□ 1.31
ARHGEF1-221ENST00000600387 CHMP4BQ9H444 224 aaKnown RBP23.26■■□□□ 1.31
ARHGEF1-221ENST00000600387 MED14O60244 1454 aa23.25■■□□□ 1.31
ARHGEF1-221ENST00000600387 GCC1Q96CN9 775 aa23.25■■□□□ 1.31
ARHGEF1-221ENST00000600387 K7ELQ4 463 aaPredicted RBP23.25■■□□□ 1.31
ARHGEF1-221ENST00000600387 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 GOLGA6L22H0YM25 854 aa23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 BRPF1P55201 1214 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 RIPK4P57078 832 aa23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 CCDC173Q0VFZ6 552 aa23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
ARHGEF1-221ENST00000600387 TPM2P07951 284 aa23.23■■□□□ 1.31
ARHGEF1-221ENST00000600387 CLEC17AQ6ZS10 378 aa23.23■■□□□ 1.31
ARHGEF1-221ENST00000600387 IBTKQ9P2D0 1353 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF1-221ENST00000600387 NPATQ14207 1427 aa23.22■■□□□ 1.31
ARHGEF1-221ENST00000600387 PPP1R9BQ96SB3 815 aa23.2■■□□□ 1.3
ARHGEF1-221ENST00000600387 A0A1W2PP64 1363 aa23.2■■□□□ 1.3
ARHGEF1-221ENST00000600387 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
ARHGEF1-221ENST00000600387 PPIP5K1Q6PFW1 1433 aa23.19■■□□□ 1.3
ARHGEF1-221ENST00000600387 ANP32BQ92688 251 aaKnown RBP23.19■■□□□ 1.3
ARHGEF1-221ENST00000600387 CABP2Q9NPB3 220 aa23.19■■□□□ 1.3
ARHGEF1-221ENST00000600387 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
ARHGEF1-221ENST00000600387 CD2BP2O95400 341 aaKnown RBP23.17■■□□□ 1.3
ARHGEF1-221ENST00000600387 KLHL40Q2TBA0 621 aa23.17■■□□□ 1.3
ARHGEF1-221ENST00000600387 CAMSAP1Q5T5Y3 1602 aa23.17■■□□□ 1.3
ARHGEF1-221ENST00000600387 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
ARHGEF1-221ENST00000600387 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF1-221ENST00000600387 NASPP49321 788 aaPredicted RBP23.16■■□□□ 1.3
ARHGEF1-221ENST00000600387 ARHGAP45Q92619 1136 aa23.16■■□□□ 1.3
ARHGEF1-221ENST00000600387 PIK3R4Q99570 1358 aa23.16■■□□□ 1.3
ARHGEF1-221ENST00000600387 DIAPH1O60610 1272 aaKnown RBP23.15■■□□□ 1.3
ARHGEF1-221ENST00000600387 GGNBP2Q9H3C7 697 aa23.15■■□□□ 1.3
ARHGEF1-221ENST00000600387 CFAP44Q96MT7 982 aa23.15■■□□□ 1.3
ARHGEF1-221ENST00000600387 CDC42BPGQ6DT37 1551 aa23.14■■□□□ 1.3
ARHGEF1-221ENST00000600387 VGFO15240 615 aaPredicted RBP23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 SSFA2P28290 1259 aa23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 ZSCAN30Q86W11 494 aa23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 FOXD4L1Q9NU39 408 aa23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
ARHGEF1-221ENST00000600387 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 PIK3C2BO00750 1634 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 AK9Q5TCS8 1911 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 PNPLA6Q8IY17 1366 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 CDC45O75419 566 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 PKNOX2Q96KN3 472 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 DDX49Q9Y6V7 483 aaKnown RBP23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
ARHGEF1-221ENST00000600387 BAG4O95429 457 aaKnown RBP23.12■■□□□ 1.29
ARHGEF1-221ENST00000600387 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
ARHGEF1-221ENST00000600387 FCHSD2O94868 740 aa23.11■■□□□ 1.29
ARHGEF1-221ENST00000600387 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
ARHGEF1-221ENST00000600387 FYB1O15117 783 aa23.11■■□□□ 1.29
ARHGEF1-221ENST00000600387 RBM42Q9BTD8 480 aaKnown RBP23.11■■□□□ 1.29
ARHGEF1-221ENST00000600387 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
ARHGEF1-221ENST00000600387 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms