RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 TRIM35Q9UPQ4 493 aa25.25■■□□□ 1.63
GRAMD1A-207ENST00000598118 KIF20BQ96Q89 1820 aa25.24■■□□□ 1.63
GRAMD1A-207ENST00000598118 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
GRAMD1A-207ENST00000598118 PCDHB15Q9Y5E8 787 aa25.24■■□□□ 1.63
GRAMD1A-207ENST00000598118 HDGFL2Q7Z4V5 671 aaPredicted RBP25.24■■□□□ 1.63
GRAMD1A-207ENST00000598118 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
GRAMD1A-207ENST00000598118 SETD1AO15047 1707 aaKnown RBP25.23■■□□□ 1.63
GRAMD1A-207ENST00000598118 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
GRAMD1A-207ENST00000598118 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
GRAMD1A-207ENST00000598118 SLC4A3P48751 1232 aa25.21■■□□□ 1.63
GRAMD1A-207ENST00000598118 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
GRAMD1A-207ENST00000598118 PNPLA6Q8IY17 1366 aa25.2■■□□□ 1.63
GRAMD1A-207ENST00000598118 MLECQ14165 292 aa25.2■■□□□ 1.63
GRAMD1A-207ENST00000598118 BCL11AQ9H165 835 aa25.2■■□□□ 1.63
GRAMD1A-207ENST00000598118 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.62
GRAMD1A-207ENST00000598118 FBLN1P23142 703 aa25.19■■□□□ 1.62
GRAMD1A-207ENST00000598118 EXOSC9Q06265 439 aaKnown RBP25.19■■□□□ 1.62
GRAMD1A-207ENST00000598118 DLC1Q96QB1 1528 aa25.19■■□□□ 1.62
GRAMD1A-207ENST00000598118 MAPK8IP3Q9UPT6 1336 aa25.18■■□□□ 1.62
GRAMD1A-207ENST00000598118 DIAPH1O60610 1272 aaKnown RBP25.18■■□□□ 1.62
GRAMD1A-207ENST00000598118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.17■■□□□ 1.62
GRAMD1A-207ENST00000598118 AAMPQ13685 434 aa25.17■■□□□ 1.62
GRAMD1A-207ENST00000598118 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
GRAMD1A-207ENST00000598118 RIPK4P57078 832 aa25.15■■□□□ 1.62
GRAMD1A-207ENST00000598118 NEFMP07197 916 aa25.15■■□□□ 1.62
GRAMD1A-207ENST00000598118 ZKSCAN2Q63HK3 967 aa25.15■■□□□ 1.62
GRAMD1A-207ENST00000598118 CT47B1P0C2W7 299 aaPredicted RBP25.14■■□□□ 1.62
GRAMD1A-207ENST00000598118 MVPQ14764 893 aaKnown RBP25.14■■□□□ 1.62
GRAMD1A-207ENST00000598118 MAP2P11137 1827 aaKnown RBP25.14■■□□□ 1.62
GRAMD1A-207ENST00000598118 NRXN3Q9Y4C0 1643 aa25.14■■□□□ 1.61
GRAMD1A-207ENST00000598118 USP19O94966 1318 aa25.13■■□□□ 1.61
GRAMD1A-207ENST00000598118 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
GRAMD1A-207ENST00000598118 SSH1Q8WYL5 1049 aa25.12■■□□□ 1.61
GRAMD1A-207ENST00000598118 SMC4Q9NTJ3 1288 aa25.12■■□□□ 1.61
GRAMD1A-207ENST00000598118 POLKQ9UBT6 870 aa25.12■■□□□ 1.61
GRAMD1A-207ENST00000598118 ATP7BP35670 1465 aa25.12■■□□□ 1.61
GRAMD1A-207ENST00000598118 SEC24BO95487 1268 aa25.11■■□□□ 1.61
GRAMD1A-207ENST00000598118 DZIP1LQ8IYY4 767 aaKnown RBP25.11■■□□□ 1.61
GRAMD1A-207ENST00000598118 LRRC7Q96NW7 1537 aa25.11■■□□□ 1.61
GRAMD1A-207ENST00000598118 IL16Q14005 1332 aa25.1■■□□□ 1.61
GRAMD1A-207ENST00000598118 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
GRAMD1A-207ENST00000598118 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
GRAMD1A-207ENST00000598118 METP08581 1390 aa25.1■■□□□ 1.61
GRAMD1A-207ENST00000598118 TRIM27P14373 513 aa25.09■■□□□ 1.61
GRAMD1A-207ENST00000598118 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
GRAMD1A-207ENST00000598118 FCHSD2O94868 740 aa25.08■■□□□ 1.61
GRAMD1A-207ENST00000598118 RSPH6AQ9H0K4 717 aa25.07■■□□□ 1.6
GRAMD1A-207ENST00000598118 USP35Q9P2H5 1018 aa25.07■■□□□ 1.6
GRAMD1A-207ENST00000598118 RWDD1Q9H446 243 aaPredicted RBP25.06■■□□□ 1.6
GRAMD1A-207ENST00000598118 WASLO00401 505 aaPredicted RBP25.06■■□□□ 1.6
GRAMD1A-207ENST00000598118 PRKAR2BP31323 418 aa25.06■■□□□ 1.6
GRAMD1A-207ENST00000598118 CPSF1Q10570 1443 aaKnown RBP25.06■■□□□ 1.6
GRAMD1A-207ENST00000598118 PNNQ9H307 717 aaKnown RBP25.06■■□□□ 1.6
GRAMD1A-207ENST00000598118 TXNDC2Q86VQ3 553 aa25.05■■□□□ 1.6
GRAMD1A-207ENST00000598118 DAXXQ9UER7 740 aaPredicted RBP25.05■■□□□ 1.6
GRAMD1A-207ENST00000598118 FAM135BQ49AJ0 1406 aa25.05■■□□□ 1.6
GRAMD1A-207ENST00000598118 NOB1Q9ULX3 412 aaKnown RBP25.05■■□□□ 1.6
GRAMD1A-207ENST00000598118 PPIP5K1Q6PFW1 1433 aa25.04■■□□□ 1.6
GRAMD1A-207ENST00000598118 ZRANB1Q9UGI0 708 aa25.04■■□□□ 1.6
GRAMD1A-207ENST00000598118 NCKAP5LQ9HCH0 1330 aa25.04■■□□□ 1.6
GRAMD1A-207ENST00000598118 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
GRAMD1A-207ENST00000598118 NME9Q86XW9 330 aa25.03■■□□□ 1.6
GRAMD1A-207ENST00000598118 EMILIN1Q9Y6C2 1016 aa25.03■■□□□ 1.6
GRAMD1A-207ENST00000598118 ZMYM3Q14202 1370 aa25.03■■□□□ 1.6
GRAMD1A-207ENST00000598118 PHACTR3Q96KR7 559 aa25.02■■□□□ 1.6
GRAMD1A-207ENST00000598118 HMOX1P09601 288 aa25.02■■□□□ 1.6
GRAMD1A-207ENST00000598118 EDC4Q6P2E9 1401 aaKnown RBP25.01■■□□□ 1.59
GRAMD1A-207ENST00000598118 ITPRIPQ8IWB1 547 aa25.01■■□□□ 1.59
GRAMD1A-207ENST00000598118 KIF13AQ9H1H9 1805 aa25■■□□□ 1.59
GRAMD1A-207ENST00000598118 ABCF1Q8NE71 845 aaKnown RBP eCLIP25■■□□□ 1.59
GRAMD1A-207ENST00000598118 DNAJC5Q9H3Z4 198 aa25■■□□□ 1.59
GRAMD1A-207ENST00000598118 NUDT16Q96DE0 195 aaKnown RBP24.99■■□□□ 1.59
GRAMD1A-207ENST00000598118 NFKBIBQ15653 356 aa24.98■■□□□ 1.59
GRAMD1A-207ENST00000598118 TMEM57Q8N5G2 664 aa24.98■■□□□ 1.59
GRAMD1A-207ENST00000598118 DDX19BQ9UMR2 479 aa24.98■■□□□ 1.59
GRAMD1A-207ENST00000598118 CPS1P31327 1500 aa24.97■■□□□ 1.59
GRAMD1A-207ENST00000598118 IL13P35225 146 aa24.97■■□□□ 1.59
GRAMD1A-207ENST00000598118 KNDC1Q76NI1 1749 aa24.97■■□□□ 1.59
GRAMD1A-207ENST00000598118 THUMPD2Q9BTF0 503 aaKnown RBP24.97■■□□□ 1.59
GRAMD1A-207ENST00000598118 MON2Q7Z3U7 1717 aa24.96■■□□□ 1.59
GRAMD1A-207ENST00000598118 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
GRAMD1A-207ENST00000598118 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
GRAMD1A-207ENST00000598118 HDAC1Q13547 482 aaPredicted RBP24.95■■□□□ 1.58
GRAMD1A-207ENST00000598118 CCDC61Q9Y6R9 512 aa24.94■■□□□ 1.58
GRAMD1A-207ENST00000598118 TECPR2O15040 1411 aa24.94■■□□□ 1.58
GRAMD1A-207ENST00000598118 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
GRAMD1A-207ENST00000598118 CDK12Q9NYV4 1490 aaPredicted RBP24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 ALDH1L2Q3SY69 923 aa24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 DLG5Q8TDM6 1919 aa24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 RRS1Q15050 365 aaKnown RBP24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 ZBTB40Q9NUA8 1239 aa24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 AKAP12Q02952 1782 aa24.93■■□□□ 1.58
GRAMD1A-207ENST00000598118 AATKQ6ZMQ8 1374 aa24.92■■□□□ 1.58
GRAMD1A-207ENST00000598118 PRR36Q9H6K5 1346 aa24.92■■□□□ 1.58
GRAMD1A-207ENST00000598118 SIRT1Q96EB6 747 aa24.91■■□□□ 1.58
GRAMD1A-207ENST00000598118 IPO8O15397 1037 aaKnown RBP24.91■■□□□ 1.58
GRAMD1A-207ENST00000598118 C3P01024 1663 aa24.91■■□□□ 1.58
GRAMD1A-207ENST00000598118 TNRQ92752 1358 aa24.9■■□□□ 1.58
GRAMD1A-207ENST00000598118 COG3Q96JB2 828 aa24.9■■□□□ 1.58
GRAMD1A-207ENST00000598118 ITSN1Q15811 1721 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms