RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-205ENST00000594973 NUDT16Q96DE0 195 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-205ENST00000594973 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
SHKBP1-205ENST00000594973 TECPR2O15040 1411 aa22.15■■□□□ 1.14
SHKBP1-205ENST00000594973 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
SHKBP1-205ENST00000594973 C3P01024 1663 aa22.14■■□□□ 1.14
SHKBP1-205ENST00000594973 FBLN1P23142 703 aa22.14■■□□□ 1.13
SHKBP1-205ENST00000594973 C20orf194Q5TEA3 1177 aa22.14■■□□□ 1.13
SHKBP1-205ENST00000594973 ATP7BP35670 1465 aa22.14■■□□□ 1.13
SHKBP1-205ENST00000594973 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
SHKBP1-205ENST00000594973 MED14O60244 1454 aa22.13■■□□□ 1.13
SHKBP1-205ENST00000594973 CRBNQ96SW2 442 aa22.13■■□□□ 1.13
SHKBP1-205ENST00000594973 NKTRP30414 1462 aaKnown RBP22.12■■□□□ 1.13
SHKBP1-205ENST00000594973 FER1L4A9Z1Z3 1794 aa22.12■■□□□ 1.13
SHKBP1-205ENST00000594973 CCDC61Q9Y6R9 512 aa22.11■■□□□ 1.13
SHKBP1-205ENST00000594973 CPS1P31327 1500 aa22.11■■□□□ 1.13
SHKBP1-205ENST00000594973 NUTM2FA1L443 756 aa22.1■■□□□ 1.13
SHKBP1-205ENST00000594973 TCERG1O14776 1098 aaKnown RBP22.1■■□□□ 1.13
SHKBP1-205ENST00000594973 IQSEC2Q5JU85 1478 aa22.1■■□□□ 1.13
SHKBP1-205ENST00000594973 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
SHKBP1-205ENST00000594973 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
SHKBP1-205ENST00000594973 NME9Q86XW9 330 aa22.08■■□□□ 1.13
SHKBP1-205ENST00000594973 CPSF1Q10570 1443 aaKnown RBP22.08■■□□□ 1.13
SHKBP1-205ENST00000594973 PRR36Q9H6K5 1346 aa22.07■■□□□ 1.12
SHKBP1-205ENST00000594973 THEMISQ8N1K5 641 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-205ENST00000594973 KIF20BQ96Q89 1820 aa22.07■■□□□ 1.12
SHKBP1-205ENST00000594973 ZRANB1Q9UGI0 708 aa22.07■■□□□ 1.12
SHKBP1-205ENST00000594973 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
SHKBP1-205ENST00000594973 DIAPH1O60610 1272 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-205ENST00000594973 BCAR3O75815 825 aa22.06■■□□□ 1.12
SHKBP1-205ENST00000594973 EDC4Q6P2E9 1401 aaKnown RBP22.06■■□□□ 1.12
SHKBP1-205ENST00000594973 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-205ENST00000594973 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
SHKBP1-205ENST00000594973 AMOTL2Q9Y2J4 779 aa22.05■■□□□ 1.12
SHKBP1-205ENST00000594973 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
SHKBP1-205ENST00000594973 POLKQ9UBT6 870 aa22.05■■□□□ 1.12
SHKBP1-205ENST00000594973 MS4A1P11836 297 aa22.04■■□□□ 1.12
SHKBP1-205ENST00000594973 GSE1Q14687 1217 aa22.04■■□□□ 1.12
SHKBP1-205ENST00000594973 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
SHKBP1-205ENST00000594973 SLIT1O75093 1534 aa22.03■■□□□ 1.12
SHKBP1-205ENST00000594973 PLEKHF1Q96S99 279 aa22.03■■□□□ 1.12
SHKBP1-205ENST00000594973 ARHGAP23Q9P227 1491 aa22.03■■□□□ 1.12
SHKBP1-205ENST00000594973 PNPLA6Q8IY17 1366 aa22.02■■□□□ 1.12
SHKBP1-205ENST00000594973 WDR63Q8IWG1 891 aa22.02■■□□□ 1.12
SHKBP1-205ENST00000594973 CCDC27Q2M243 656 aa22.02■■□□□ 1.12
SHKBP1-205ENST00000594973 MAPK8IP3Q9UPT6 1336 aa22.02■■□□□ 1.11
SHKBP1-205ENST00000594973 EMILIN1Q9Y6C2 1016 aa22.01■■□□□ 1.11
SHKBP1-205ENST00000594973 CDC42BPGQ6DT37 1551 aa22.01■■□□□ 1.11
SHKBP1-205ENST00000594973 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.01■■□□□ 1.11
SHKBP1-205ENST00000594973 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
SHKBP1-205ENST00000594973 COG3Q96JB2 828 aa22■■□□□ 1.11
SHKBP1-205ENST00000594973 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
SHKBP1-205ENST00000594973 BRPF3Q9ULD4 1205 aa22■■□□□ 1.11
SHKBP1-205ENST00000594973 PDE4AP27815 886 aa21.99■■□□□ 1.11
SHKBP1-205ENST00000594973 BACH2Q9BYV9 841 aa21.99■■□□□ 1.11
SHKBP1-205ENST00000594973 TMPOP42166 694 aaKnown RBP21.98■■□□□ 1.11
SHKBP1-205ENST00000594973 ZNF692Q9BU19 519 aaPredicted RBP21.98■■□□□ 1.11
SHKBP1-205ENST00000594973 DDRGK1Q96HY6 314 aa21.98■■□□□ 1.11
SHKBP1-205ENST00000594973 RRS1Q15050 365 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-205ENST00000594973 NPM2Q86SE8 214 aaKnown RBP21.97■■□□□ 1.11
SHKBP1-205ENST00000594973 ACEP12821 1306 aa21.97■■□□□ 1.11
SHKBP1-205ENST00000594973 ADGRB2O60241 1585 aa21.96■■□□□ 1.11
SHKBP1-205ENST00000594973 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
SHKBP1-205ENST00000594973 EIF5BO60841 1220 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-205ENST00000594973 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-205ENST00000594973 HMOX1P09601 288 aa21.94■■□□□ 1.1
SHKBP1-205ENST00000594973 RIPK4P57078 832 aa21.94■■□□□ 1.1
SHKBP1-205ENST00000594973 TRIM35Q9UPQ4 493 aa21.94■■□□□ 1.1
SHKBP1-205ENST00000594973 NCBP3Q53F19 620 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-205ENST00000594973 MON2Q7Z3U7 1717 aa21.93■■□□□ 1.1
SHKBP1-205ENST00000594973 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
SHKBP1-205ENST00000594973 TSR2Q969E8 191 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-205ENST00000594973 MAP2P11137 1827 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-205ENST00000594973 FCHSD2O94868 740 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 TTC21BQ7Z4L5 1316 aa21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 RIMS1Q86UR5 1692 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-205ENST00000594973 PLEKHG3A1L390 1219 aa21.91■■□□□ 1.1
SHKBP1-205ENST00000594973 RARSP54136 660 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-205ENST00000594973 AKAP12Q02952 1782 aa21.91■■□□□ 1.1
SHKBP1-205ENST00000594973 CEP170BQ9Y4F5 1589 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-205ENST00000594973 PTCH1Q13635 1447 aa21.9■■□□□ 1.1
SHKBP1-205ENST00000594973 KCNA6P17658 529 aa21.9■■□□□ 1.1
SHKBP1-205ENST00000594973 AATKQ6ZMQ8 1374 aa21.9■■□□□ 1.1
SHKBP1-205ENST00000594973 FAM43AQ8N2R8 423 aa21.9■■□□□ 1.1
SHKBP1-205ENST00000594973 IL13P35225 146 aa21.89■■□□□ 1.09
SHKBP1-205ENST00000594973 SKAP1Q86WV1 359 aa21.89■■□□□ 1.09
SHKBP1-205ENST00000594973 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
SHKBP1-205ENST00000594973 SOX12O15370 315 aa21.88■■□□□ 1.09
SHKBP1-205ENST00000594973 PANK1Q8TE04 598 aa21.88■■□□□ 1.09
SHKBP1-205ENST00000594973 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
SHKBP1-205ENST00000594973 USP6P35125 1406 aa21.87■■□□□ 1.09
SHKBP1-205ENST00000594973 CDK12Q9NYV4 1490 aaPredicted RBP21.87■■□□□ 1.09
SHKBP1-205ENST00000594973 DIP2AQ14689 1571 aa21.86■■□□□ 1.09
SHKBP1-205ENST00000594973 NFKBIBQ15653 356 aa21.86■■□□□ 1.09
SHKBP1-205ENST00000594973 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms