RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 ST5P78524 1137 aa7.82□□□□□ -1.16
SMAD4-212ENST00000591126 NKTRP30414 1462 aaKnown RBP7.82□□□□□ -1.16
SMAD4-212ENST00000591126 SLC3A2P08195 630 aaKnown RBP7.81□□□□□ -1.16
SMAD4-212ENST00000591126 MFAP1P55081 439 aaKnown RBP7.81□□□□□ -1.16
SMAD4-212ENST00000591126 ZNF428Q96B54 188 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 PODXL2Q9NZ53 605 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 TCEAL9Q9UHQ7 104 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 KDM5DQ9BY66 1539 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
SMAD4-212ENST00000591126 CT47B1P0C2W7 299 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-212ENST00000591126 ZC3H6P61129 1189 aaKnown RBP7.8□□□□□ -1.16
SMAD4-212ENST00000591126 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 PPIP5K1Q6PFW1 1433 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 NUTM2GQ5VZR2 741 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 USP21Q9UK80 565 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 CFAP43Q8NDM7 1665 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 PIK3C2GO75747 1445 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 KCNA4P22459 653 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 G3BP1Q13283 466 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMAD4-212ENST00000591126 KIF16BQ96L93 1317 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 PLEKHG1Q9ULL1 1385 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 PDZRN3Q9UPQ7 1066 aa7.8□□□□□ -1.16
SMAD4-212ENST00000591126 TCOF1Q13428 1488 aaKnown RBP7.79□□□□□ -1.16
SMAD4-212ENST00000591126 SCAF11Q99590 1463 aaKnown RBP7.79□□□□□ -1.16
SMAD4-212ENST00000591126 SYNE3Q6ZMZ3 975 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 RUFY2Q8WXA3 655 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 NOS1P29475 1434 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 RFC4P35249 363 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 TPRNQ4KMQ1 711 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 ERC1Q8IUD2 1116 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 MYO5CQ9NQX4 1742 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 FCHSD2O94868 740 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 RIPK4P57078 832 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 NYXQ9GZU5 481 aa7.79□□□□□ -1.16
SMAD4-212ENST00000591126 ARHGEF5Q12774 1597 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 IL2RBP14784 551 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 CPLX2Q6PUV4 134 aaKnown RBP7.78□□□□□ -1.16
SMAD4-212ENST00000591126 FBXW7Q969H0 707 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 GLI2P10070 1586 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 GNAI3P08754 354 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 NF2P35240 595 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 GGNBP2Q9H3C7 697 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 HECW2Q9P2P5 1572 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 PPP1R42Q7Z4L9 355 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 SPATA31A6Q5VVP1 1343 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 SAMD9Q5K651 1589 aa7.78□□□□□ -1.16
SMAD4-212ENST00000591126 EIF2S2P20042 333 aaKnown RBP7.78□□□□□ -1.16
SMAD4-212ENST00000591126 IGHMBP2P38935 993 aaKnown RBP7.78□□□□□ -1.16
SMAD4-212ENST00000591126 RPGRQ92834 1020 aaKnown RBP7.78□□□□□ -1.16
SMAD4-212ENST00000591126 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 GNL2Q13823 731 aaKnown RBP7.77□□□□□ -1.17
SMAD4-212ENST00000591126 FAM196AQ6ZSG2 479 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 ZCRB1Q8TBF4 217 aaKnown RBP7.77□□□□□ -1.17
SMAD4-212ENST00000591126 GNAT3A8MTJ3 354 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 SOGA3Q5TF21 947 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 SLC4A10Q6U841 1118 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 A2ML1A8K2U0 1454 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 NAIPQ13075 1403 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 ERICH6BQ5W0A0 696 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 FMNL2Q96PY5 1086 aa7.77□□□□□ -1.17
SMAD4-212ENST00000591126 PPP4R3BQ5MIZ7 849 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ZSCAN25Q6NSZ9 544 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ZNF287Q9HBT7 754 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ERC2O15083 957 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ARHGEF6Q15052 776 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 HOOK2Q96ED9 719 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 EIF2AK4Q9P2K8 1649 aaKnown RBP7.76□□□□□ -1.17
SMAD4-212ENST00000591126 PDE6BP35913 854 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 CCDC125Q86Z20 511 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 TCP11L2Q8N4U5 519 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 FBXO41Q8TF61 875 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 BEGAINQ9BUH8 593 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ZCCHC11Q5TAX3 1644 aaKnown RBP7.76□□□□□ -1.17
SMAD4-212ENST00000591126 ITPRIPQ8IWB1 547 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 SUPT20HQ8NEM7 779 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 MPHOSPH8Q99549 860 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 UGGT1Q9NYU2 1555 aa7.76□□□□□ -1.17
SMAD4-212ENST00000591126 THRAP3Q9Y2W1 955 aaKnown RBP7.76□□□□□ -1.17
SMAD4-212ENST00000591126 AKAP17AQ02040 695 aaKnown RBP7.75□□□□□ -1.17
SMAD4-212ENST00000591126 HDAC9Q9UKV0 1011 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 EFCAB6Q5THR3 1501 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 FKBP5Q13451 457 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-212ENST00000591126 ATF7IPQ6VMQ6 1270 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 ADGRL2O95490 1459 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 PCDH11XQ9BZA7 1347 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 PCDH11YQ9BZA8 1340 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 MYO1BO43795 1136 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 LMOD1P29536 600 aaPredicted RBP7.75□□□□□ -1.17
SMAD4-212ENST00000591126 ZKSCAN2Q63HK3 967 aa7.75□□□□□ -1.17
SMAD4-212ENST00000591126 CCDC87Q9NVE4 849 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 ANKRD36BQ8N2N9 1353 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 JCADQ9P266 1359 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 ACEP12821 1306 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 BTBD11A6QL63 1104 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 EYA3Q99504 573 aa7.74□□□□□ -1.17
SMAD4-212ENST00000591126 RTCBQ9Y3I0 505 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms