RNA–Protein interactions for RNA: ENST00000588643.1

SRP68-207, Transcript of signal recognition particle 68, humanhuman

TSL 2

Gene SRP68, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-207ENST00000588643 CHMP5Q9NZZ3 219 aa13.8□□□□□ -0.2
SRP68-207ENST00000588643 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
SRP68-207ENST00000588643 RLBP1P12271 317 aa13.79□□□□□ -0.2
SRP68-207ENST00000588643 HSPA2P54652 639 aa13.79□□□□□ -0.2
SRP68-207ENST00000588643 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
SRP68-207ENST00000588643 POGKQ9P215 609 aa13.78□□□□□ -0.2
SRP68-207ENST00000588643 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
SRP68-207ENST00000588643 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
SRP68-207ENST00000588643 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
SRP68-207ENST00000588643 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
SRP68-207ENST00000588643 IPO8O15397 1037 aaKnown RBP13.76□□□□□ -0.21
SRP68-207ENST00000588643 EIF5BO60841 1220 aaKnown RBP13.76□□□□□ -0.21
SRP68-207ENST00000588643 U2AF1L5P0DN76 240 aaPredicted RBP13.76□□□□□ -0.21
SRP68-207ENST00000588643 U2AF1Q01081 240 aaKnown RBP eCLIP13.76□□□□□ -0.21
SRP68-207ENST00000588643 GOLGA6L3A6NEY3 463 aa13.76□□□□□ -0.21
SRP68-207ENST00000588643 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
SRP68-207ENST00000588643 PTMSP20962 102 aa13.76□□□□□ -0.21
SRP68-207ENST00000588643 MCM4P33991 863 aa13.76□□□□□ -0.21
SRP68-207ENST00000588643 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
SRP68-207ENST00000588643 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
SRP68-207ENST00000588643 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
SRP68-207ENST00000588643 MED14O60244 1454 aa13.75□□□□□ -0.21
SRP68-207ENST00000588643 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
SRP68-207ENST00000588643 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
SRP68-207ENST00000588643 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
SRP68-207ENST00000588643 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
SRP68-207ENST00000588643 NPATQ14207 1427 aa13.74□□□□□ -0.21
SRP68-207ENST00000588643 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
SRP68-207ENST00000588643 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
SRP68-207ENST00000588643 SMC4Q9NTJ3 1288 aa13.74□□□□□ -0.21
SRP68-207ENST00000588643 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
SRP68-207ENST00000588643 CHGAP10645 457 aaKnown RBP13.73□□□□□ -0.21
SRP68-207ENST00000588643 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
SRP68-207ENST00000588643 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
SRP68-207ENST00000588643 LMTK3Q96Q04 1460 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 SNX21Q969T3 373 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 BCL2L13Q9BXK5 485 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 SETD1BQ9UPS6 1966 aaKnown RBP13.72□□□□□ -0.21
SRP68-207ENST00000588643 TULP4Q9NRJ4 1543 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
SRP68-207ENST00000588643 TMPOP42166 694 aaKnown RBP13.71□□□□□ -0.21
SRP68-207ENST00000588643 MRE11P49959 708 aa13.71□□□□□ -0.21
SRP68-207ENST00000588643 ZFYVE9O95405 1425 aa13.71□□□□□ -0.21
SRP68-207ENST00000588643 ANKRD26Q9UPS8 1709 aa13.71□□□□□ -0.21
SRP68-207ENST00000588643 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
SRP68-207ENST00000588643 ABCC3O15438 1527 aa13.71□□□□□ -0.22
SRP68-207ENST00000588643 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.71□□□□□ -0.22
SRP68-207ENST00000588643 PIK3C2BO00750 1634 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 CAMSAP1Q5T5Y3 1602 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 TRIM27P14373 513 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 RBM25P49756 843 aaKnown RBP13.7□□□□□ -0.22
SRP68-207ENST00000588643 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 TNNQ9UQP3 1299 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 NCOA3Q9Y6Q9 1424 aa13.7□□□□□ -0.22
SRP68-207ENST00000588643 BRPF1P55201 1214 aaPredicted RBP13.69□□□□□ -0.22
SRP68-207ENST00000588643 EXOSC9Q06265 439 aaKnown RBP13.69□□□□□ -0.22
SRP68-207ENST00000588643 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
SRP68-207ENST00000588643 CFAP44Q96MT7 982 aa13.69□□□□□ -0.22
SRP68-207ENST00000588643 TRAK2O60296 914 aa13.69□□□□□ -0.22
SRP68-207ENST00000588643 MFAP1P55081 439 aaKnown RBP13.69□□□□□ -0.22
SRP68-207ENST00000588643 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
SRP68-207ENST00000588643 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
SRP68-207ENST00000588643 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
SRP68-207ENST00000588643 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
SRP68-207ENST00000588643 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
SRP68-207ENST00000588643 NUCB1Q02818 461 aa13.68□□□□□ -0.22
SRP68-207ENST00000588643 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
SRP68-207ENST00000588643 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
SRP68-207ENST00000588643 TMEM132EQ6IEE7 984 aa13.67□□□□□ -0.22
SRP68-207ENST00000588643 GBP4Q96PP9 640 aa13.67□□□□□ -0.22
SRP68-207ENST00000588643 TRIM35Q9UPQ4 493 aa13.67□□□□□ -0.22
SRP68-207ENST00000588643 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
SRP68-207ENST00000588643 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
SRP68-207ENST00000588643 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
SRP68-207ENST00000588643 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
SRP68-207ENST00000588643 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
SRP68-207ENST00000588643 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
SRP68-207ENST00000588643 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.22
SRP68-207ENST00000588643 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
SRP68-207ENST00000588643 CLCN1P35523 988 aa13.65□□□□□ -0.22
SRP68-207ENST00000588643 ARHGAP45Q92619 1136 aa13.65□□□□□ -0.22
SRP68-207ENST00000588643 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
SRP68-207ENST00000588643 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
SRP68-207ENST00000588643 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
SRP68-207ENST00000588643 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 DDIT3P35638 169 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
SRP68-207ENST00000588643 FCHSD2O94868 740 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 RIPK4P57078 832 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
SRP68-207ENST00000588643 CHD1LQ86WJ1 897 aa13.63□□□□□ -0.23
SRP68-207ENST00000588643 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
SRP68-207ENST00000588643 SLC52A1Q9NWF4 448 aa13.63□□□□□ -0.23
SRP68-207ENST00000588643 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
SRP68-207ENST00000588643 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
SRP68-207ENST00000588643 CABP2Q9NPB3 220 aa13.63□□□□□ -0.23
SRP68-207ENST00000588643 RRAGDQ9NQL2 400 aaPredicted RBP13.63□□□□□ -0.23
SRP68-207ENST00000588643 TNRQ92752 1358 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms