RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
RNF43-205ENST00000581868 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
RNF43-205ENST00000581868 FYB1O15117 783 aa17.34■□□□□ 0.37
RNF43-205ENST00000581868 MLH3Q9UHC1 1453 aa17.34■□□□□ 0.37
RNF43-205ENST00000581868 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
RNF43-205ENST00000581868 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
RNF43-205ENST00000581868 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
RNF43-205ENST00000581868 ARXQ96QS3 562 aa17.33■□□□□ 0.36
RNF43-205ENST00000581868 ADGRB2O60241 1585 aa17.33■□□□□ 0.36
RNF43-205ENST00000581868 HECW2Q9P2P5 1572 aa17.33■□□□□ 0.36
RNF43-205ENST00000581868 HDAC1Q13547 482 aaPredicted RBP17.33■□□□□ 0.36
RNF43-205ENST00000581868 PRAM1Q96QH2 718 aa17.33■□□□□ 0.36
RNF43-205ENST00000581868 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.36
RNF43-205ENST00000581868 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
RNF43-205ENST00000581868 CAMSAP1Q5T5Y3 1602 aa17.31■□□□□ 0.36
RNF43-205ENST00000581868 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
RNF43-205ENST00000581868 SIGLEC1Q9BZZ2 1709 aa17.31■□□□□ 0.36
RNF43-205ENST00000581868 FBLN1P23142 703 aa17.29■□□□□ 0.36
RNF43-205ENST00000581868 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
RNF43-205ENST00000581868 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
RNF43-205ENST00000581868 IL16Q14005 1332 aa17.28■□□□□ 0.36
RNF43-205ENST00000581868 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
RNF43-205ENST00000581868 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
RNF43-205ENST00000581868 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
RNF43-205ENST00000581868 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
RNF43-205ENST00000581868 LNPKQ9C0E8 428 aa17.27■□□□□ 0.36
RNF43-205ENST00000581868 CABP1Q9NZU7 370 aa17.27■□□□□ 0.36
RNF43-205ENST00000581868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.354e-7■■□□□ 13.6
RNF43-205ENST00000581868 ATAD2Q6PL18 1390 aa17.26■□□□□ 0.35
RNF43-205ENST00000581868 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
RNF43-205ENST00000581868 MCM4P33991 863 aa17.26■□□□□ 0.35
RNF43-205ENST00000581868 CDK19Q9BWU1 502 aa17.26■□□□□ 0.35
RNF43-205ENST00000581868 SLC52A1Q9NWF4 448 aa17.26■□□□□ 0.35
RNF43-205ENST00000581868 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
RNF43-205ENST00000581868 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
RNF43-205ENST00000581868 PNNQ9H307 717 aaKnown RBP17.25■□□□□ 0.35
RNF43-205ENST00000581868 CHMP5Q9NZZ3 219 aa17.25■□□□□ 0.35
RNF43-205ENST00000581868 PIK3C2BO00750 1634 aa17.24■□□□□ 0.35
RNF43-205ENST00000581868 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
RNF43-205ENST00000581868 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
RNF43-205ENST00000581868 CFAP74Q9C0B2 1584 aa17.24■□□□□ 0.35
RNF43-205ENST00000581868 NUCB1Q02818 461 aa17.23■□□□□ 0.35
RNF43-205ENST00000581868 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
RNF43-205ENST00000581868 HMOX1P09601 288 aa17.23■□□□□ 0.35
RNF43-205ENST00000581868 CD163L1Q9NR16 1453 aa17.23■□□□□ 0.35
RNF43-205ENST00000581868 FCHSD2O94868 740 aa17.22■□□□□ 0.35
RNF43-205ENST00000581868 ALDH1L2Q3SY69 923 aa17.22■□□□□ 0.35
RNF43-205ENST00000581868 C1orf115Q9H7X2 142 aa17.22■□□□□ 0.35
RNF43-205ENST00000581868 PTPRMP28827 1452 aa17.22■□□□□ 0.35
RNF43-205ENST00000581868 YTHDC2Q9H6S0 1430 aaKnown RBP17.21■□□□□ 0.35
RNF43-205ENST00000581868 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
RNF43-205ENST00000581868 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
RNF43-205ENST00000581868 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
RNF43-205ENST00000581868 GOLGA6L3A6NEY3 463 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 ZFYVE9O95405 1425 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
RNF43-205ENST00000581868 EIF5BO60841 1220 aaKnown RBP17.19■□□□□ 0.34
RNF43-205ENST00000581868 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
RNF43-205ENST00000581868 TRAK2O60296 914 aa17.19■□□□□ 0.34
RNF43-205ENST00000581868 ARHGAP31Q2M1Z3 1444 aa17.19■□□□□ 0.34
RNF43-205ENST00000581868 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■□□□□ 8.9
RNF43-205ENST00000581868 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
RNF43-205ENST00000581868 TSPYL6Q8N831 410 aa17.18■□□□□ 0.34
RNF43-205ENST00000581868 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 MED14O60244 1454 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 YEATS2Q9ULM3 1422 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
RNF43-205ENST00000581868 VAMP4O75379 141 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
RNF43-205ENST00000581868 RBM25P49756 843 aaKnown RBP17.16■□□□□ 0.34
RNF43-205ENST00000581868 NFE2L2Q16236 605 aa17.16■□□□□ 0.34
RNF43-205ENST00000581868 LRRC7Q96NW7 1537 aa17.16■□□□□ 0.34
RNF43-205ENST00000581868 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
RNF43-205ENST00000581868 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
RNF43-205ENST00000581868 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
RNF43-205ENST00000581868 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
RNF43-205ENST00000581868 RRAGDQ9NQL2 400 aaPredicted RBP17.15■□□□□ 0.34
RNF43-205ENST00000581868 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
RNF43-205ENST00000581868 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 PPIP5K1Q6PFW1 1433 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 NEO1Q92859 1461 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 BMP2KLQ5H9B9 411 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 FAM135BQ49AJ0 1406 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
RNF43-205ENST00000581868 TMEM131LA2VDJ0 1609 aa17.13■□□□□ 0.33
RNF43-205ENST00000581868 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
RNF43-205ENST00000581868 GCC1Q96CN9 775 aa17.13■□□□□ 0.33
RNF43-205ENST00000581868 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
RNF43-205ENST00000581868 GNAI1P63096 354 aa17.12■□□□□ 0.33
RNF43-205ENST00000581868 SNX21Q969T3 373 aa17.12■□□□□ 0.33
RNF43-205ENST00000581868 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
RNF43-205ENST00000581868 ARHGEF40Q8TER5 1519 aa17.12■□□□□ 0.33
RNF43-205ENST00000581868 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
RNF43-205ENST00000581868 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms