RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
BBS4-210ENST00000566400 PNPLA6Q8IY17 1366 aa11.95□□□□□ -0.5
BBS4-210ENST00000566400 A2ML1A8K2U0 1454 aa11.95□□□□□ -0.5
BBS4-210ENST00000566400 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 CD163L1Q9NR16 1453 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 FYB1O15117 783 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
BBS4-210ENST00000566400 C8orf34Q49A92 452 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 ZNF428Q96B54 188 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 SIRT1Q96EB6 747 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 CDK19Q9BWU1 502 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
BBS4-210ENST00000566400 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
BBS4-210ENST00000566400 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
BBS4-210ENST00000566400 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
BBS4-210ENST00000566400 ZKSCAN2Q63HK3 967 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
BBS4-210ENST00000566400 PLEKHF1Q96S99 279 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
BBS4-210ENST00000566400 RIMS2Q9UQ26 1411 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 FCHSD2O94868 740 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
BBS4-210ENST00000566400 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
BBS4-210ENST00000566400 NBR1Q14596 966 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
BBS4-210ENST00000566400 U2SURPO15042 1029 aaKnown RBP11.92□□□□□ -0.5
BBS4-210ENST00000566400 GGNBP2Q9H3C7 697 aa11.92□□□□□ -0.5
BBS4-210ENST00000566400 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 RGS3P49796 1198 aa11.91□□□□□ -0.5
BBS4-210ENST00000566400 MVPQ14764 893 aaKnown RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 VIRMAQ69YN4 1812 aaKnown RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
BBS4-210ENST00000566400 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
BBS4-210ENST00000566400 FAM135BQ49AJ0 1406 aa11.9□□□□□ -0.5
BBS4-210ENST00000566400 EDC4Q6P2E9 1401 aaKnown RBP11.9□□□□□ -0.5
BBS4-210ENST00000566400 KIF16BQ96L93 1317 aa11.9□□□□□ -0.5
BBS4-210ENST00000566400 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
BBS4-210ENST00000566400 DEKP35659 375 aaKnown RBP11.9□□□□□ -0.5
BBS4-210ENST00000566400 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
BBS4-210ENST00000566400 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.51
BBS4-210ENST00000566400 DDX19BQ9UMR2 479 aa11.9□□□□□ -0.51
BBS4-210ENST00000566400 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
BBS4-210ENST00000566400 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
BBS4-210ENST00000566400 IGHDP01880 384 aa11.89□□□□□ -0.51
BBS4-210ENST00000566400 ALDH1L2Q3SY69 923 aa11.89□□□□□ -0.51
BBS4-210ENST00000566400 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
BBS4-210ENST00000566400 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
BBS4-210ENST00000566400 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
BBS4-210ENST00000566400 TECPR2O15040 1411 aa11.88□□□□□ -0.51
BBS4-210ENST00000566400 RIPK4P57078 832 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 SMC4Q9NTJ3 1288 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 PPIP5K1Q6PFW1 1433 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 WASLO00401 505 aaPredicted RBP11.87□□□□□ -0.51
BBS4-210ENST00000566400 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
BBS4-210ENST00000566400 LMOD3Q0VAK6 560 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 BECN1Q14457 450 aa11.87□□□□□ -0.51
BBS4-210ENST00000566400 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
BBS4-210ENST00000566400 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
BBS4-210ENST00000566400 CDK12Q9NYV4 1490 aaPredicted RBP11.86□□□□□ -0.51
BBS4-210ENST00000566400 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
BBS4-210ENST00000566400 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
BBS4-210ENST00000566400 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
BBS4-210ENST00000566400 SKAP1Q86WV1 359 aa11.85□□□□□ -0.51
BBS4-210ENST00000566400 CPS1P31327 1500 aa11.85□□□□□ -0.51
BBS4-210ENST00000566400 RLBP1P12271 317 aa11.83□□□□□ -0.51
BBS4-210ENST00000566400 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.51
BBS4-210ENST00000566400 POLKQ9UBT6 870 aa11.83□□□□□ -0.51
BBS4-210ENST00000566400 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.51
BBS4-210ENST00000566400 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.51
BBS4-210ENST00000566400 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
BBS4-210ENST00000566400 NRXN3Q9Y4C0 1643 aa11.83□□□□□ -0.52
BBS4-210ENST00000566400 RSPH6AQ9H0K4 717 aa11.83□□□□□ -0.52
BBS4-210ENST00000566400 GNAI1P63096 354 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 NFE2L2Q16236 605 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
BBS4-210ENST00000566400 COG3Q96JB2 828 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 TNRQ92752 1358 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 TRIM27P14373 513 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
BBS4-210ENST00000566400 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
BBS4-210ENST00000566400 MON2Q7Z3U7 1717 aa11.81□□□□□ -0.52
BBS4-210ENST00000566400 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
BBS4-210ENST00000566400 WAPLQ7Z5K2 1190 aa11.81□□□□□ -0.52
BBS4-210ENST00000566400 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
BBS4-210ENST00000566400 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
BBS4-210ENST00000566400 ITPRIPQ8IWB1 547 aa11.8□□□□□ -0.52
BBS4-210ENST00000566400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
BBS4-210ENST00000566400 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
BBS4-210ENST00000566400 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
BBS4-210ENST00000566400 NOB1Q9ULX3 412 aaKnown RBP11.8□□□□□ -0.52
BBS4-210ENST00000566400 TMEM2Q9UHN6 1383 aa11.79□□□□□ -0.52
BBS4-210ENST00000566400 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
BBS4-210ENST00000566400 METP08581 1390 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms