RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 PRDM10Q9NQV6 1147 aa11.63□□□□□ -0.55
AC138869.3-201ENST00000563960 GPRASP1Q5JY77 1395 aa11.63□□□□□ -0.55
AC138869.3-201ENST00000563960 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
AC138869.3-201ENST00000563960 OFD1O75665 1012 aa11.63□□□□□ -0.55
AC138869.3-201ENST00000563960 SCAF11Q99590 1463 aaKnown RBP11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 TRAK2O60296 914 aa11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 TERF1P54274 439 aa11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 UTP14CQ5TAP6 766 aaKnown RBP11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 SLIT1O75093 1534 aa11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 PLEKHG1Q9ULL1 1385 aa11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
AC138869.3-201ENST00000563960 DMTNQ08495 405 aa11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 ADAMTS13Q76LX8 1427 aa11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 VIRMAQ69YN4 1812 aaKnown RBP11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 SEC24BO95487 1268 aa11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 PRAM1Q96QH2 718 aa11.61□□□□□ -0.55
AC138869.3-201ENST00000563960 TESK2Q96S53 571 aa11.6□□□□□ -0.55
AC138869.3-201ENST00000563960 LMTK3Q96Q04 1460 aa11.6□□□□□ -0.55
AC138869.3-201ENST00000563960 ADGRB1O14514 1584 aa11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 ARID3AQ99856 593 aa11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 ISY1Q9ULR0 285 aaKnown RBP11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 TBX22Q9Y458 520 aa11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
AC138869.3-201ENST00000563960 YTHDC2Q9H6S0 1430 aaKnown RBP11.58□□□□□ -0.56
AC138869.3-201ENST00000563960 ZSCAN20P17040 1043 aaPredicted RBP11.58□□□□□ -0.56
AC138869.3-201ENST00000563960 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
AC138869.3-201ENST00000563960 BRD4O60885 1362 aaPredicted RBP11.58□□□□□ -0.56
AC138869.3-201ENST00000563960 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
AC138869.3-201ENST00000563960 MINK1Q8N4C8 1332 aaPredicted RBP11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 NRXN3Q9Y4C0 1643 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 ZNF142P52746 1687 aaPredicted RBP11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 KCNA6P17658 529 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 GAS2L3Q86XJ1 694 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
AC138869.3-201ENST00000563960 NPHP4O75161 1426 aaPredicted RBP11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 IQGAP1P46940 1657 aa11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 ZSCAN30Q86W11 494 aa11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 SETBP1Q9Y6X0 1596 aa11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 DISP3Q9P2K9 1392 aa11.56□□□□□ -0.56
AC138869.3-201ENST00000563960 MTERF4Q7Z6M4 381 aaKnown RBP11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 MED14O60244 1454 aa11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 EIF3AQ14152 1382 aaKnown RBP11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 ROBO2Q9HCK4 1378 aa11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
AC138869.3-201ENST00000563960 TMF1P82094 1093 aa11.54□□□□□ -0.56
AC138869.3-201ENST00000563960 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
AC138869.3-201ENST00000563960 KIAA1210Q9ULL0 1709 aa11.54□□□□□ -0.56
AC138869.3-201ENST00000563960 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
AC138869.3-201ENST00000563960 UQCRHLA0A096LP55 91 aa11.53□□□□□ -0.56
AC138869.3-201ENST00000563960 UQCRHP07919 91 aa11.53□□□□□ -0.56
AC138869.3-201ENST00000563960 PAXIP1Q6ZW49 1069 aaPredicted RBP11.53□□□□□ -0.56
AC138869.3-201ENST00000563960 NUTM2FA1L443 756 aa11.52□□□□□ -0.56
AC138869.3-201ENST00000563960 PPP1R9BQ96SB3 815 aa11.52□□□□□ -0.56
AC138869.3-201ENST00000563960 CABP2Q9NPB3 220 aa11.52□□□□□ -0.56
AC138869.3-201ENST00000563960 MSNP26038 577 aaKnown RBP11.52□□□□□ -0.57
AC138869.3-201ENST00000563960 CCDC173Q0VFZ6 552 aa11.51□□□□□ -0.57
AC138869.3-201ENST00000563960 CCDC94Q9BW85 323 aaPredicted RBP11.51□□□□□ -0.57
AC138869.3-201ENST00000563960 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
AC138869.3-201ENST00000563960 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
AC138869.3-201ENST00000563960 LAMC1P11047 1609 aa11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 DYNC1I1O14576 645 aa11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 RALBP1Q15311 655 aa11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 SETD1AO15047 1707 aaKnown RBP11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 DDX11L8A8MPP1 907 aa11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 KIF20AO95235 890 aa11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 ANP32BQ92688 251 aaKnown RBP11.5□□□□□ -0.57
AC138869.3-201ENST00000563960 VGLL3A8MV65 326 aa11.49□□□□□ -0.57
AC138869.3-201ENST00000563960 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
AC138869.3-201ENST00000563960 CDK19Q9BWU1 502 aa11.49□□□□□ -0.57
AC138869.3-201ENST00000563960 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
AC138869.3-201ENST00000563960 ZNF335Q9H4Z2 1342 aaPredicted RBP11.49□□□□□ -0.57
AC138869.3-201ENST00000563960 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
AC138869.3-201ENST00000563960 PROSER2Q86WR7 435 aaPredicted RBP11.48□□□□□ -0.57
AC138869.3-201ENST00000563960 EVC2Q86UK5 1308 aa11.48□□□□□ -0.57
AC138869.3-201ENST00000563960 GTPBP4Q9BZE4 634 aaKnown RBP11.48□□□□□ -0.57
AC138869.3-201ENST00000563960 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
AC138869.3-201ENST00000563960 SLC12A5Q9H2X9 1139 aa11.47□□□□□ -0.57
AC138869.3-201ENST00000563960 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
AC138869.3-201ENST00000563960 PER1O15534 1290 aaPredicted RBP11.46□□□□□ -0.57
AC138869.3-201ENST00000563960 ZNF500O60304 480 aaPredicted RBP11.46□□□□□ -0.57
AC138869.3-201ENST00000563960 IGHDP01880 384 aa11.46□□□□□ -0.57
AC138869.3-201ENST00000563960 XPCQ01831 940 aaPredicted RBP11.46□□□□□ -0.57
AC138869.3-201ENST00000563960 STRCQ7RTU9 1775 aa11.46□□□□□ -0.57
AC138869.3-201ENST00000563960 TECPR2O15040 1411 aa11.46□□□□□ -0.58
AC138869.3-201ENST00000563960 ARHGEF28Q8N1W1 1705 aaKnown RBP11.46□□□□□ -0.58
AC138869.3-201ENST00000563960 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.58
AC138869.3-201ENST00000563960 LETM1O95202 739 aaPredicted RBP11.46□□□□□ -0.58
AC138869.3-201ENST00000563960 NLRP13Q86W25 1043 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms