RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
PSMA4-217ENST00000560033 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
PSMA4-217ENST00000560033 HLA-CQ95604 372 aa10.67□□□□□ -0.7
PSMA4-217ENST00000560033 RRBP1Q9P2E9 1410 aaKnown RBP10.67□□□□□ -0.7
PSMA4-217ENST00000560033 FAM160A2Q8N612 972 aaPredicted RBP10.66□□□□□ -0.7
PSMA4-217ENST00000560033 SPSB2Q99619 263 aa10.66□□□□□ -0.7
PSMA4-217ENST00000560033 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
PSMA4-217ENST00000560033 EPRSP07814 1512 aaKnown RBP10.66□□□□□ -0.7
PSMA4-217ENST00000560033 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 LRRIQ1Q96JM4 1722 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
PSMA4-217ENST00000560033 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.7
PSMA4-217ENST00000560033 RNF223E7ERA6 249 aa10.64□□□□□ -0.71
PSMA4-217ENST00000560033 S1PR4O95977 384 aa10.64□□□□□ -0.71
PSMA4-217ENST00000560033 CDK13Q14004 1512 aaKnown RBP10.63□□□□□ -0.71
PSMA4-217ENST00000560033 EHBP1L1Q8N3D4 1523 aa10.63□□□□□ -0.71
PSMA4-217ENST00000560033 SHROOM2Q13796 1616 aa10.63□□□□□ -0.71
PSMA4-217ENST00000560033 GUCA2AQ02747 115 aa10.63□□□□□ -0.71
PSMA4-217ENST00000560033 MSS51Q4VC12 460 aa10.63□□□□□ -0.71
PSMA4-217ENST00000560033 EMID1Q96A84 441 aaPredicted RBP10.63□□□□□ -0.71
PSMA4-217ENST00000560033 NUP153P49790 1475 aaKnown RBP10.62□□□□□ -0.71
PSMA4-217ENST00000560033 PLB1Q6P1J6 1458 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 PTPRGP23470 1445 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 GGCXP38435 758 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 Q3C1V9 767 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 NUTM1Q86Y26 1132 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 SLC6A16Q9GZN6 736 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 PCDHGC3Q9UN70 934 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 CLASP1Q7Z460 1538 aa10.62□□□□□ -0.71
PSMA4-217ENST00000560033 GJA5P36382 358 aa10.61□□□□□ -0.71
PSMA4-217ENST00000560033 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
PSMA4-217ENST00000560033 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
PSMA4-217ENST00000560033 MAGI3Q5TCQ9 1506 aa10.61□□□□□ -0.71
PSMA4-217ENST00000560033 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
PSMA4-217ENST00000560033 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
PSMA4-217ENST00000560033 ZEB1P37275 1124 aaPredicted RBP10.6□□□□□ -0.71
PSMA4-217ENST00000560033 FAM50AQ14320 339 aaKnown RBP10.6□□□□□ -0.71
PSMA4-217ENST00000560033 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
PSMA4-217ENST00000560033 TBC1D2Q9BYX2 928 aa10.6□□□□□ -0.71
PSMA4-217ENST00000560033 ABCA8O94911 1581 aa10.6□□□□□ -0.71
PSMA4-217ENST00000560033 SUPT6HQ7KZ85 1726 aaKnown RBP10.59□□□□□ -0.71
PSMA4-217ENST00000560033 ITGAEP38570 1179 aa10.59□□□□□ -0.71
PSMA4-217ENST00000560033 PPEF1O14829 653 aaPredicted RBP10.58□□□□□ -0.72
PSMA4-217ENST00000560033 FDX1P10109 184 aa10.58□□□□□ -0.72
PSMA4-217ENST00000560033 NDUFV2P19404 249 aa10.58□□□□□ -0.72
PSMA4-217ENST00000560033 PRDM9Q9NQV7 894 aa10.58□□□□□ -0.72
PSMA4-217ENST00000560033 V9GY48 417 aaPredicted RBP10.58□□□□□ -0.72
PSMA4-217ENST00000560033 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
PSMA4-217ENST00000560033 MMP16P51512 607 aa10.57□□□□□ -0.72
PSMA4-217ENST00000560033 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
PSMA4-217ENST00000560033 USB1Q9BQ65 265 aaKnown RBP10.57□□□□□ -0.72
PSMA4-217ENST00000560033 GPBP1L1Q9HC44 474 aaPredicted RBP10.57□□□□□ -0.72
PSMA4-217ENST00000560033 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
PSMA4-217ENST00000560033 ERCC6L2Q5T890 1561 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 SPTLC1O15269 473 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
PSMA4-217ENST00000560033 PRKD2Q9BZL6 878 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
PSMA4-217ENST00000560033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.721e-6■■□□□ 12.1
PSMA4-217ENST00000560033 DXOO77932 396 aaKnown RBP10.55□□□□□ -0.72
PSMA4-217ENST00000560033 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
PSMA4-217ENST00000560033 ATP10BO94823 1461 aa10.55□□□□□ -0.72
PSMA4-217ENST00000560033 TROQ12816 1431 aaPredicted RBP10.54□□□□□ -0.72
PSMA4-217ENST00000560033 TPRNQ4KMQ1 711 aa10.54□□□□□ -0.72
PSMA4-217ENST00000560033 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
PSMA4-217ENST00000560033 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
PSMA4-217ENST00000560033 PLEKHD1A6NEE1 506 aa10.53□□□□□ -0.72
PSMA4-217ENST00000560033 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
PSMA4-217ENST00000560033 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
PSMA4-217ENST00000560033 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
PSMA4-217ENST00000560033 PCDHB15Q9Y5E8 787 aa10.51□□□□□ -0.73
PSMA4-217ENST00000560033 MIA2Q96PC5 1412 aa10.5□□□□□ -0.73
PSMA4-217ENST00000560033 ABCC2Q92887 1545 aa10.5□□□□□ -0.73
PSMA4-217ENST00000560033 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
PSMA4-217ENST00000560033 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
PSMA4-217ENST00000560033 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
PSMA4-217ENST00000560033 FCF1Q9Y324 198 aaKnown RBP10.5□□□□□ -0.73
PSMA4-217ENST00000560033 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
PSMA4-217ENST00000560033 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
PSMA4-217ENST00000560033 SLC19A1P41440 591 aa10.49□□□□□ -0.73
PSMA4-217ENST00000560033 LIMD1Q9UGP4 676 aa10.49□□□□□ -0.73
PSMA4-217ENST00000560033 JUNDP17535 347 aa10.48□□□□□ -0.73
PSMA4-217ENST00000560033 SPRYD7Q5W111 196 aa10.48□□□□□ -0.73
PSMA4-217ENST00000560033 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
PSMA4-217ENST00000560033 UHRF1BP1LA0JNW5 1464 aa10.48□□□□□ -0.73
PSMA4-217ENST00000560033 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
PSMA4-217ENST00000560033 MTMR2Q13614 643 aa10.47□□□□□ -0.73
PSMA4-217ENST00000560033 PRPF38BQ5VTL8 546 aaKnown RBP10.47□□□□□ -0.73
PSMA4-217ENST00000560033 SPDYE5A6NIY4 337 aa10.46□□□□□ -0.73
PSMA4-217ENST00000560033 C6orf229H3BNL8 230 aa10.46□□□□□ -0.73
PSMA4-217ENST00000560033 RPIAP49247 311 aa10.46□□□□□ -0.73
PSMA4-217ENST00000560033 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
PSMA4-217ENST00000560033 DDRGK1Q96HY6 314 aa10.46□□□□□ -0.73
PSMA4-217ENST00000560033 CFDP1Q9UEE9 299 aaPredicted RBP10.46□□□□□ -0.73
PSMA4-217ENST00000560033 KIF14Q15058 1648 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms