RNA–Protein interactions for RNA: ENST00000559596.5

NUSAP1-208, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NUSAP1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-208ENST00000559596 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
NUSAP1-208ENST00000559596 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
NUSAP1-208ENST00000559596 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
NUSAP1-208ENST00000559596 DIAPH1O60610 1272 aaKnown RBP17.09■□□□□ 0.33
NUSAP1-208ENST00000559596 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
NUSAP1-208ENST00000559596 SIRT1Q96EB6 747 aa17.09■□□□□ 0.33
NUSAP1-208ENST00000559596 CABP1Q9NZU7 370 aa17.09■□□□□ 0.33
NUSAP1-208ENST00000559596 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
NUSAP1-208ENST00000559596 PLEKHF1Q96S99 279 aa17.08■□□□□ 0.32
NUSAP1-208ENST00000559596 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
NUSAP1-208ENST00000559596 FRAT1Q92837 279 aaPredicted RBP17.07■□□□□ 0.32
NUSAP1-208ENST00000559596 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
NUSAP1-208ENST00000559596 NEFMP07197 916 aa17.07■□□□□ 0.32
NUSAP1-208ENST00000559596 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
NUSAP1-208ENST00000559596 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
NUSAP1-208ENST00000559596 MLECQ14165 292 aa17.06■□□□□ 0.32
NUSAP1-208ENST00000559596 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
NUSAP1-208ENST00000559596 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
NUSAP1-208ENST00000559596 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
NUSAP1-208ENST00000559596 EDC4Q6P2E9 1401 aaKnown RBP17.05■□□□□ 0.32
NUSAP1-208ENST00000559596 KIF13AQ9H1H9 1805 aa17.05■□□□□ 0.32
NUSAP1-208ENST00000559596 TECPR2O15040 1411 aa17.05■□□□□ 0.32
NUSAP1-208ENST00000559596 FCHSD2O94868 740 aa17.04■□□□□ 0.32
NUSAP1-208ENST00000559596 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
NUSAP1-208ENST00000559596 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
NUSAP1-208ENST00000559596 TNRQ92752 1358 aa17.03■□□□□ 0.32
NUSAP1-208ENST00000559596 RTL5Q5HYW3 569 aaPredicted RBP17.03■□□□□ 0.32
NUSAP1-208ENST00000559596 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.31
NUSAP1-208ENST00000559596 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
NUSAP1-208ENST00000559596 CPS1P31327 1500 aa17.02■□□□□ 0.31
NUSAP1-208ENST00000559596 RGS3P49796 1198 aa17.01■□□□□ 0.31
NUSAP1-208ENST00000559596 C8orf34Q49A92 452 aa17.01■□□□□ 0.31
NUSAP1-208ENST00000559596 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
NUSAP1-208ENST00000559596 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
NUSAP1-208ENST00000559596 IGHDP01880 384 aa17■□□□□ 0.31
NUSAP1-208ENST00000559596 RIPK4P57078 832 aa17■□□□□ 0.31
NUSAP1-208ENST00000559596 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
NUSAP1-208ENST00000559596 SKAP1Q86WV1 359 aa17■□□□□ 0.31
NUSAP1-208ENST00000559596 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
NUSAP1-208ENST00000559596 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
NUSAP1-208ENST00000559596 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
NUSAP1-208ENST00000559596 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 METP08581 1390 aa16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 DZIP1LQ8IYY4 767 aaKnown RBP16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
NUSAP1-208ENST00000559596 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
NUSAP1-208ENST00000559596 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
NUSAP1-208ENST00000559596 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
NUSAP1-208ENST00000559596 LRRC7Q96NW7 1537 aa16.98■□□□□ 0.31
NUSAP1-208ENST00000559596 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
NUSAP1-208ENST00000559596 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 NUDT16Q96DE0 195 aaKnown RBP16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 ITSN1Q15811 1721 aa16.96■□□□□ 0.31
NUSAP1-208ENST00000559596 NBR1Q14596 966 aa16.96■□□□□ 0.3
NUSAP1-208ENST00000559596 BCL2L13Q9BXK5 485 aa16.96■□□□□ 0.3
NUSAP1-208ENST00000559596 RLBP1P12271 317 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 TXNDC2Q86VQ3 553 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 COG3Q96JB2 828 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
NUSAP1-208ENST00000559596 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
NUSAP1-208ENST00000559596 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
NUSAP1-208ENST00000559596 PRKAR2BP31323 418 aa16.94■□□□□ 0.3
NUSAP1-208ENST00000559596 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
NUSAP1-208ENST00000559596 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
NUSAP1-208ENST00000559596 ATF7IPQ6VMQ6 1270 aa16.93■□□□□ 0.3
NUSAP1-208ENST00000559596 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
NUSAP1-208ENST00000559596 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
NUSAP1-208ENST00000559596 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
NUSAP1-208ENST00000559596 PCDHB15Q9Y5E8 787 aa16.92■□□□□ 0.3
NUSAP1-208ENST00000559596 C3P01024 1663 aa16.91■□□□□ 0.3
NUSAP1-208ENST00000559596 IL13P35225 146 aa16.9■□□□□ 0.3
NUSAP1-208ENST00000559596 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
NUSAP1-208ENST00000559596 TRIM27P14373 513 aa16.89■□□□□ 0.29
NUSAP1-208ENST00000559596 GNAI1P63096 354 aa16.89■□□□□ 0.29
NUSAP1-208ENST00000559596 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
NUSAP1-208ENST00000559596 NME9Q86XW9 330 aa16.89■□□□□ 0.29
NUSAP1-208ENST00000559596 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 ADAMTS13Q76LX8 1427 aa16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 NOB1Q9ULX3 412 aaKnown RBP16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
NUSAP1-208ENST00000559596 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
NUSAP1-208ENST00000559596 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
NUSAP1-208ENST00000559596 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms