RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ABCC11Q96J66 1382 aa6.95□□□□□ -1.3
GABPB1-207ENST00000558335 ZNF428Q96B54 188 aa6.95□□□□□ -1.3
GABPB1-207ENST00000558335 C14orf93Q9H972 538 aaKnown RBP6.95□□□□□ -1.3
GABPB1-207ENST00000558335 MED14O60244 1454 aa6.95□□□□□ -1.3
GABPB1-207ENST00000558335 ERCC6L2Q5T890 1561 aa6.95□□□□□ -1.3
GABPB1-207ENST00000558335 PLEKHH1Q9ULM0 1364 aa6.95□□□□□ -1.3
GABPB1-207ENST00000558335 ARHGAP31Q2M1Z3 1444 aa6.94□□□□□ -1.3
GABPB1-207ENST00000558335 ANKRD26Q9UPS8 1709 aa6.94□□□□□ -1.3
GABPB1-207ENST00000558335 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-207ENST00000558335 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
GABPB1-207ENST00000558335 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
GABPB1-207ENST00000558335 CCDC9Q9Y3X0 531 aaKnown RBP6.94□□□□□ -1.3
GABPB1-207ENST00000558335 IL16Q14005 1332 aa6.94□□□□□ -1.3
GABPB1-207ENST00000558335 CAMSAP1Q5T5Y3 1602 aa6.94□□□□□ -1.3
GABPB1-207ENST00000558335 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 POGZQ7Z3K3 1410 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 GOLGA6L3A6NEY3 463 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 CLSTN1O94985 981 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 MCCP23508 829 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 TERF1P54274 439 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 TPRNQ4KMQ1 711 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 L1TD1Q5T7N2 865 aaKnown RBP6.93□□□□□ -1.3
GABPB1-207ENST00000558335 TICAM2Q86XR7 235 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 AFAP1Q8N556 730 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 SLC52A1Q9NWF4 448 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 PIK3C2BO00750 1634 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 MROH2AA6NES4 1674 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 ANKRD36BQ8N2N9 1353 aa6.93□□□□□ -1.3
GABPB1-207ENST00000558335 UGGT1Q9NYU2 1555 aa6.92□□□□□ -1.3
GABPB1-207ENST00000558335 APAF1O14727 1248 aa6.92□□□□□ -1.3
GABPB1-207ENST00000558335 IPO8O15397 1037 aaKnown RBP6.92□□□□□ -1.3
GABPB1-207ENST00000558335 WWC1Q8IX03 1113 aa6.92□□□□□ -1.3
GABPB1-207ENST00000558335 ZNF622Q969S3 477 aaKnown RBP eCLIP6.92□□□□□ -1.3
GABPB1-207ENST00000558335 ZFP91Q96JP5 570 aaPredicted RBP6.92□□□□□ -1.3
GABPB1-207ENST00000558335 TERF2IPQ9NYB0 399 aa6.92□□□□□ -1.3
GABPB1-207ENST00000558335 NSD3Q9BZ95 1437 aa6.92□□□□□ -1.3
GABPB1-207ENST00000558335 GLI2P10070 1586 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 FRMPD1Q5SYB0 1578 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 SHPRHQ149N8 1683 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 ARHGEF28Q8N1W1 1705 aaKnown RBP6.91□□□□□ -1.3
GABPB1-207ENST00000558335 CLCN1P35523 988 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 SETQ01105 290 aaPredicted RBP6.91□□□□□ -1.3
GABPB1-207ENST00000558335 KIF16BQ96L93 1317 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 NOS1P29475 1434 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 CD109Q6YHK3 1445 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 ABCC3O15438 1527 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 ADGRB1O14514 1584 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 REREQ9P2R6 1566 aa6.91□□□□□ -1.3
GABPB1-207ENST00000558335 CLTCQ00610 1675 aaKnown RBP6.9□□□□□ -1.3
GABPB1-207ENST00000558335 PLIN1O60240 522 aa6.9□□□□□ -1.3
GABPB1-207ENST00000558335 KIF20AO95235 890 aa6.9□□□□□ -1.3
GABPB1-207ENST00000558335 CFAP70Q5T0N1 1121 aa6.9□□□□□ -1.3
GABPB1-207ENST00000558335 ZKSCAN2Q63HK3 967 aa6.9□□□□□ -1.3
GABPB1-207ENST00000558335 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
GABPB1-207ENST00000558335 DDX19BQ9UMR2 479 aa6.9□□□□□ -1.3
GABPB1-207ENST00000558335 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
GABPB1-207ENST00000558335 ADGRB2O60241 1585 aa6.9□□□□□ -1.31
GABPB1-207ENST00000558335 MMP14P50281 582 aa6.89□□□□□ -1.31
GABPB1-207ENST00000558335 C8orf34Q49A92 452 aa6.89□□□□□ -1.31
GABPB1-207ENST00000558335 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
GABPB1-207ENST00000558335 NPATQ14207 1427 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 ADGRF5Q8IZF2 1346 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 PHF14O94880 888 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 RARSP54136 660 aaKnown RBP6.88□□□□□ -1.31
GABPB1-207ENST00000558335 GRIPAP1Q4V328 841 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 HDGFL2Q7Z4V5 671 aaPredicted RBP6.88□□□□□ -1.31
GABPB1-207ENST00000558335 TCP11L2Q8N4U5 519 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 CEP120Q8N960 986 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 SECISBP2LQ93073 1101 aaKnown RBP6.88□□□□□ -1.31
GABPB1-207ENST00000558335 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
GABPB1-207ENST00000558335 NEXMIFQ5QGS0 1516 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 HDGFP51858 240 aaKnown RBP6.87□□□□□ -1.31
GABPB1-207ENST00000558335 LMOD3Q0VAK6 560 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-207ENST00000558335 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 ALDH1L2Q3SY69 923 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 CCDC146Q8IYE0 955 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 CARD14Q9BXL6 1004 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 GTPBP4Q9BZE4 634 aaKnown RBP6.87□□□□□ -1.31
GABPB1-207ENST00000558335 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.87□□□□□ -1.31
GABPB1-207ENST00000558335 KIF20BQ96Q89 1820 aa6.87□□□□□ -1.31
GABPB1-207ENST00000558335 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
GABPB1-207ENST00000558335 DLC1Q96QB1 1528 aa6.86□□□□□ -1.31
GABPB1-207ENST00000558335 CHGAP10645 457 aaKnown RBP6.86□□□□□ -1.31
GABPB1-207ENST00000558335 RGS3P49796 1198 aa6.86□□□□□ -1.31
GABPB1-207ENST00000558335 IRX3P78415 501 aaPredicted RBP6.86□□□□□ -1.31
GABPB1-207ENST00000558335 SLC20A2Q08357 652 aa6.86□□□□□ -1.31
GABPB1-207ENST00000558335 MVPQ14764 893 aaKnown RBP6.86□□□□□ -1.31
GABPB1-207ENST00000558335 C20orf194Q5TEA3 1177 aa6.86□□□□□ -1.31
GABPB1-207ENST00000558335 DZIP1LQ8IYY4 767 aaKnown RBP6.86□□□□□ -1.31
GABPB1-207ENST00000558335 ZBTB12Q9Y330 459 aaPredicted RBP6.86□□□□□ -1.31
GABPB1-207ENST00000558335 U2AF1L5P0DN76 240 aaPredicted RBP6.85□□□□□ -1.31
GABPB1-207ENST00000558335 MTHFSP49914 203 aa6.85□□□□□ -1.31
GABPB1-207ENST00000558335 BRPF1P55201 1214 aaPredicted RBP6.85□□□□□ -1.31
GABPB1-207ENST00000558335 U2AF1Q01081 240 aaKnown RBP eCLIP6.85□□□□□ -1.31
GABPB1-207ENST00000558335 ARHGAP45Q92619 1136 aa6.85□□□□□ -1.31
GABPB1-207ENST00000558335 PLCD4Q9BRC7 762 aa6.85□□□□□ -1.31
GABPB1-207ENST00000558335 TRAK1Q9UPV9 953 aa6.85□□□□□ -1.31
GABPB1-207ENST00000558335 ATP7BP35670 1465 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms