RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
HNRNPC-233ENST00000557768 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
HNRNPC-233ENST00000557768 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
HNRNPC-233ENST00000557768 NDUFV2P19404 249 aa9.36□□□□□ -0.91
HNRNPC-233ENST00000557768 PTPRGP23470 1445 aa9.36□□□□□ -0.91
HNRNPC-233ENST00000557768 MOXD2PA6NHM9 499 aa9.35□□□□□ -0.91
HNRNPC-233ENST00000557768 FDX1P10109 184 aa9.35□□□□□ -0.91
HNRNPC-233ENST00000557768 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-233ENST00000557768 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
HNRNPC-233ENST00000557768 SALL2Q9Y467 1007 aaPredicted RBP9.35□□□□□ -0.91
HNRNPC-233ENST00000557768 SYMPKQ92797 1274 aaKnown RBP9.34□□□□□ -0.91
HNRNPC-233ENST00000557768 PRKD2Q9BZL6 878 aa9.34□□□□□ -0.91
HNRNPC-233ENST00000557768 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
HNRNPC-233ENST00000557768 ABCC2Q92887 1545 aa9.34□□□□□ -0.91
HNRNPC-233ENST00000557768 CARMIL1Q5VZK9 1371 aa9.34□□□□□ -0.91
HNRNPC-233ENST00000557768 CARMIL2Q6F5E8 1435 aa9.33□□□□□ -0.92
HNRNPC-233ENST00000557768 ASXL2Q76L83 1435 aa9.33□□□□□ -0.92
HNRNPC-233ENST00000557768 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
HNRNPC-233ENST00000557768 GLI2P10070 1586 aa9.33□□□□□ -0.92
HNRNPC-233ENST00000557768 ZCCHC11Q5TAX3 1644 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-233ENST00000557768 MAP3K4Q9Y6R4 1608 aa9.32□□□□□ -0.92
HNRNPC-233ENST00000557768 USB1Q9BQ65 265 aaKnown RBP9.32□□□□□ -0.92
HNRNPC-233ENST00000557768 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
HNRNPC-233ENST00000557768 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
HNRNPC-233ENST00000557768 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
HNRNPC-233ENST00000557768 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
HNRNPC-233ENST00000557768 DIXDC1Q155Q3 683 aa9.31□□□□□ -0.92
HNRNPC-233ENST00000557768 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
HNRNPC-233ENST00000557768 PLB1Q6P1J6 1458 aa9.31□□□□□ -0.92
HNRNPC-233ENST00000557768 CTTNBP2Q8WZ74 1663 aa9.3□□□□□ -0.92
HNRNPC-233ENST00000557768 UHRF1BP1LA0JNW5 1464 aa9.3□□□□□ -0.92
HNRNPC-233ENST00000557768 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
HNRNPC-233ENST00000557768 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
HNRNPC-233ENST00000557768 MSS51Q4VC12 460 aa9.29□□□□□ -0.92
HNRNPC-233ENST00000557768 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
HNRNPC-233ENST00000557768 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
HNRNPC-233ENST00000557768 KIAA0556O60303 1618 aa9.28□□□□□ -0.92
HNRNPC-233ENST00000557768 CSPP1Q1MSJ5 1256 aa9.28□□□□□ -0.92
HNRNPC-233ENST00000557768 RSBN1LQ6PCB5 846 aaPredicted RBP9.28□□□□□ -0.92
HNRNPC-233ENST00000557768 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
HNRNPC-233ENST00000557768 ADGRL1O94910 1474 aa9.28□□□□□ -0.92
HNRNPC-233ENST00000557768 EPRSP07814 1512 aaKnown RBP9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 UGGT2Q9NYU1 1516 aa9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 SLC19A1P41440 591 aa9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 PLA2G2CQ5R387 149 aa9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 PCDHB15Q9Y5E8 787 aa9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 V9GY48 417 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 COL17A1Q9UMD9 1497 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-233ENST00000557768 KDM5BQ9UGL1 1544 aa9.26□□□□□ -0.93
HNRNPC-233ENST00000557768 SPTLC1O15269 473 aa9.26□□□□□ -0.93
HNRNPC-233ENST00000557768 RETREG3Q86VR2 466 aa9.26□□□□□ -0.93
HNRNPC-233ENST00000557768 RAPGEF2Q9Y4G8 1499 aa9.26□□□□□ -0.93
HNRNPC-233ENST00000557768 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
HNRNPC-233ENST00000557768 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-233ENST00000557768 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
HNRNPC-233ENST00000557768 MMP16P51512 607 aa9.24□□□□□ -0.93
HNRNPC-233ENST00000557768 MTMR2Q13614 643 aa9.24□□□□□ -0.93
HNRNPC-233ENST00000557768 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
HNRNPC-233ENST00000557768 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
HNRNPC-233ENST00000557768 TEX14Q8IWB6 1497 aa9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 GJA5P36382 358 aa9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 RSPH6AQ9H0K4 717 aa9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 ATP1B4Q9UN42 357 aaPredicted RBP9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 CFAP43Q8NDM7 1665 aa9.23□□□□□ -0.93
HNRNPC-233ENST00000557768 JUNDP17535 347 aa9.22□□□□□ -0.93
HNRNPC-233ENST00000557768 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
HNRNPC-233ENST00000557768 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
HNRNPC-233ENST00000557768 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
HNRNPC-233ENST00000557768 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.93
HNRNPC-233ENST00000557768 HECW2Q9P2P5 1572 aa9.21□□□□□ -0.93
HNRNPC-233ENST00000557768 HRCP23327 699 aa9.21□□□□□ -0.94
HNRNPC-233ENST00000557768 CLK2P49760 499 aaKnown RBP9.21□□□□□ -0.94
HNRNPC-233ENST00000557768 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.94
HNRNPC-233ENST00000557768 SPDYE5A6NIY4 337 aa9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 NUTM2DQ5VT03 806 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 SPRYD7Q5W111 196 aa9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 ABCA8O94911 1581 aa9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 KIF21BO75037 1637 aa9.2□□□□□ -0.94
HNRNPC-233ENST00000557768 ZBTB24O43167 697 aaPredicted RBP9.19□□□□□ -0.94
HNRNPC-233ENST00000557768 QPCTQ16769 361 aa9.19□□□□□ -0.94
HNRNPC-233ENST00000557768 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
HNRNPC-233ENST00000557768 ZNF697Q5TEC3 545 aa9.18□□□□□ -0.94
HNRNPC-233ENST00000557768 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-233ENST00000557768 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
HNRNPC-233ENST00000557768 TSC1Q92574 1164 aa9.18□□□□□ -0.94
HNRNPC-233ENST00000557768 NUDT12Q9BQG2 462 aa9.18□□□□□ -0.94
HNRNPC-233ENST00000557768 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
HNRNPC-233ENST00000557768 CFAP99D6REC4 459 aa9.17□□□□□ -0.94
HNRNPC-233ENST00000557768 SKIV2LQ15477 1246 aaKnown RBP9.17□□□□□ -0.94
HNRNPC-233ENST00000557768 MAGI3Q5TCQ9 1506 aa9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 CD109Q6YHK3 1445 aa9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 GFRA3O60609 400 aa9.16□□□□□ -0.94
HNRNPC-233ENST00000557768 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms