RNA–Protein interactions for RNA: ENST00000553932.5

LINC00639-201, long intergenic non-protein coding RNA 639, humanhuman

TSL 2 BASIC

Gene LINC00639, Length 4,496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-201ENST00000553932 VGLL3A8MV65 326 aa17.94■□□□□ 0.46
LINC00639-201ENST00000553932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC00639-201ENST00000553932 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
LINC00639-201ENST00000553932 USP25Q9UHP3 1055 aa17.93■□□□□ 0.46
LINC00639-201ENST00000553932 ZKSCAN5Q9Y2L8 839 aa17.93■□□□□ 0.46
LINC00639-201ENST00000553932 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
LINC00639-201ENST00000553932 PDIA4P13667 645 aaKnown RBP17.92■□□□□ 0.46
LINC00639-201ENST00000553932 KLHL40Q2TBA0 621 aa17.92■□□□□ 0.46
LINC00639-201ENST00000553932 PRIMPOLQ96LW4 560 aa17.92■□□□□ 0.46
LINC00639-201ENST00000553932 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
LINC00639-201ENST00000553932 TIGD1Q96MW7 591 aa17.92■□□□□ 0.46
LINC00639-201ENST00000553932 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
LINC00639-201ENST00000553932 BAG4O95429 457 aaKnown RBP17.91■□□□□ 0.46
LINC00639-201ENST00000553932 TSPYL1Q9H0U9 437 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 RBM27Q9P2N5 1060 aaKnown RBP17.9■□□□□ 0.46
LINC00639-201ENST00000553932 SEC24BO95487 1268 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 CREBRFQ8IUR6 639 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 AK7Q96M32 723 aa17.9■□□□□ 0.46
LINC00639-201ENST00000553932 ZNF830Q96NB3 372 aaPredicted RBP17.9■□□□□ 0.46
LINC00639-201ENST00000553932 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
LINC00639-201ENST00000553932 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
LINC00639-201ENST00000553932 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
LINC00639-201ENST00000553932 RAPGEF6Q8TEU7 1601 aa17.89■□□□□ 0.45
LINC00639-201ENST00000553932 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
LINC00639-201ENST00000553932 DEF6Q9H4E7 631 aa17.89■□□□□ 0.45
LINC00639-201ENST00000553932 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
LINC00639-201ENST00000553932 FAM177BA6PVY3 158 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 H0YHG0 523 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 CCDC192P0DO97 292 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 GTF2F1P35269 517 aaKnown RBP eCLIP17.88■□□□□ 0.45
LINC00639-201ENST00000553932 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
LINC00639-201ENST00000553932 RIPK4P57078 832 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 ZSCAN23Q3MJ62 389 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 STK31Q9BXU1 1019 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 WDR62O43379 1518 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
LINC00639-201ENST00000553932 PLEKHH2Q8IVE3 1493 aa17.87■□□□□ 0.45
LINC00639-201ENST00000553932 EXOSC9Q06265 439 aaKnown RBP17.87■□□□□ 0.45
LINC00639-201ENST00000553932 CHD1LQ86WJ1 897 aa17.86■□□□□ 0.45
LINC00639-201ENST00000553932 C16orf45Q96MC5 204 aaPredicted RBP17.86■□□□□ 0.45
LINC00639-201ENST00000553932 KIAA0556O60303 1618 aa17.86■□□□□ 0.45
LINC00639-201ENST00000553932 KIF20AO95235 890 aa17.86■□□□□ 0.45
LINC00639-201ENST00000553932 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
LINC00639-201ENST00000553932 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
LINC00639-201ENST00000553932 KIF14Q15058 1648 aa17.85■□□□□ 0.45
LINC00639-201ENST00000553932 MCM2P49736 904 aa17.85■□□□□ 0.45
LINC00639-201ENST00000553932 NOLC1Q14978 699 aaKnown RBP eCLIP17.85■□□□□ 0.45
LINC00639-201ENST00000553932 TSR2Q969E8 191 aaKnown RBP17.85■□□□□ 0.45
LINC00639-201ENST00000553932 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
LINC00639-201ENST00000553932 DNAJC2Q99543 621 aaKnown RBP17.84■□□□□ 0.45
LINC00639-201ENST00000553932 API5Q9BZZ5 524 aaKnown RBP17.84■□□□□ 0.45
LINC00639-201ENST00000553932 IRX3P78415 501 aaPredicted RBP17.84■□□□□ 0.45
LINC00639-201ENST00000553932 NINLQ9Y2I6 1382 aa17.84■□□□□ 0.45
LINC00639-201ENST00000553932 POLR3GO15318 223 aaPredicted RBP17.84■□□□□ 0.45
LINC00639-201ENST00000553932 PATL2C9JE40 543 aaKnown RBP17.83■□□□□ 0.45
LINC00639-201ENST00000553932 FILIP1Q7Z7B0 1213 aa17.83■□□□□ 0.45
LINC00639-201ENST00000553932 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
LINC00639-201ENST00000553932 ACBD3Q9H3P7 528 aa17.83■□□□□ 0.44
LINC00639-201ENST00000553932 NOB1Q9ULX3 412 aaKnown RBP17.83■□□□□ 0.44
LINC00639-201ENST00000553932 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
LINC00639-201ENST00000553932 TNNT1P13805 278 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
LINC00639-201ENST00000553932 GPATCH11Q8N954 259 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 ADCY5O95622 1261 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 CCDC73Q6ZRK6 1079 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 GCC1Q96CN9 775 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 TERF2IPQ9NYB0 399 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
LINC00639-201ENST00000553932 FMNL2Q96PY5 1086 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 HS1BP3Q53T59 392 aa17.82■□□□□ 0.44
LINC00639-201ENST00000553932 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.82■□□□□ 0.44
LINC00639-201ENST00000553932 RDXP35241 583 aaKnown RBP17.81■□□□□ 0.44
LINC00639-201ENST00000553932 TTC12Q9H892 705 aaPredicted RBP17.81■□□□□ 0.44
LINC00639-201ENST00000553932 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
LINC00639-201ENST00000553932 HDGFP51858 240 aaKnown RBP17.81■□□□□ 0.44
LINC00639-201ENST00000553932 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
LINC00639-201ENST00000553932 EVC2Q86UK5 1308 aa17.8■□□□□ 0.44
LINC00639-201ENST00000553932 TULP1O00294 542 aaPredicted RBP17.8■□□□□ 0.44
LINC00639-201ENST00000553932 ATF7IPQ6VMQ6 1270 aa17.8■□□□□ 0.44
LINC00639-201ENST00000553932 CALRP27797 417 aaKnown RBP17.8■□□□□ 0.44
LINC00639-201ENST00000553932 UBXN4Q92575 508 aa17.8■□□□□ 0.44
LINC00639-201ENST00000553932 GGNBP2Q9H3C7 697 aa17.8■□□□□ 0.44
LINC00639-201ENST00000553932 GDPD2Q9HCC8 539 aa17.8■□□□□ 0.44
LINC00639-201ENST00000553932 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
LINC00639-201ENST00000553932 SDF4Q9BRK5 362 aa17.79■□□□□ 0.44
LINC00639-201ENST00000553932 SMC2O95347 1197 aa17.79■□□□□ 0.44
LINC00639-201ENST00000553932 PTPN14Q15678 1187 aa17.79■□□□□ 0.44
LINC00639-201ENST00000553932 TMCO3Q6UWJ1 677 aa17.79■□□□□ 0.44
LINC00639-201ENST00000553932 KRT222Q8N1A0 295 aa17.79■□□□□ 0.44
LINC00639-201ENST00000553932 TCOF1Q13428 1488 aaKnown RBP17.79■□□□□ 0.44
LINC00639-201ENST00000553932 NOL7Q9UMY1 257 aaKnown RBP17.78■□□□□ 0.44
LINC00639-201ENST00000553932 FAM177A1Q8N128 213 aaPredicted RBP17.78■□□□□ 0.44
LINC00639-201ENST00000553932 TNMDQ9H2S6 317 aa17.78■□□□□ 0.44
LINC00639-201ENST00000553932 SAMD9Q5K651 1589 aa17.78■□□□□ 0.44
LINC00639-201ENST00000553932 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
LINC00639-201ENST00000553932 LRSAM1Q6UWE0 723 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms