RNA–Protein interactions for RNA: ENST00000552562.1

CBX5-205, Transcript of chromobox 5, humanhuman

TSL 4

Gene CBX5, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-205ENST00000552562 ATP7BP35670 1465 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 KIF7Q2M1P5 1343 aa11.08□□□□□ -0.64
CBX5-205ENST00000552562 FMN2Q9NZ56 1722 aa11.07□□□□□ -0.64
CBX5-205ENST00000552562 ATAD2Q6PL18 1390 aa11.07□□□□□ -0.64
CBX5-205ENST00000552562 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
CBX5-205ENST00000552562 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
CBX5-205ENST00000552562 DDX17Q92841 729 aaKnown RBP11.07□□□□□ -0.64
CBX5-205ENST00000552562 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
CBX5-205ENST00000552562 PPIP5K1Q6PFW1 1433 aa11.07□□□□□ -0.64
CBX5-205ENST00000552562 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
CBX5-205ENST00000552562 SLC12A5Q9H2X9 1139 aa11.06□□□□□ -0.64
CBX5-205ENST00000552562 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
CBX5-205ENST00000552562 FOXO3O43524 673 aa11.05□□□□□ -0.64
CBX5-205ENST00000552562 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
CBX5-205ENST00000552562 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
CBX5-205ENST00000552562 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
CBX5-205ENST00000552562 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
CBX5-205ENST00000552562 PLEKHG3A1L390 1219 aa11.04□□□□□ -0.64
CBX5-205ENST00000552562 ACEP12821 1306 aa11.04□□□□□ -0.64
CBX5-205ENST00000552562 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
CBX5-205ENST00000552562 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
CBX5-205ENST00000552562 PSME1Q06323 249 aa11.02□□□□□ -0.65
CBX5-205ENST00000552562 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
CBX5-205ENST00000552562 NPHP3Q7Z494 1330 aa11.01□□□□□ -0.65
CBX5-205ENST00000552562 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
CBX5-205ENST00000552562 POLR3AO14802 1390 aaPredicted RBP11.01□□□□□ -0.65
CBX5-205ENST00000552562 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
CBX5-205ENST00000552562 HSPA1LP34931 641 aa11□□□□□ -0.65
CBX5-205ENST00000552562 HDGFL2Q7Z4V5 671 aaPredicted RBP11□□□□□ -0.65
CBX5-205ENST00000552562 FBXO41Q8TF61 875 aa11□□□□□ -0.65
CBX5-205ENST00000552562 PANK3Q9H999 370 aa11□□□□□ -0.65
CBX5-205ENST00000552562 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
CBX5-205ENST00000552562 A0A1W2PP64 1363 aa11□□□□□ -0.65
CBX5-205ENST00000552562 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
CBX5-205ENST00000552562 TOPAZ1Q8N9V7 1692 aa10.99□□□□□ -0.65
CBX5-205ENST00000552562 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
CBX5-205ENST00000552562 KTN1Q86UP2 1357 aaKnown RBP10.99□□□□□ -0.65
CBX5-205ENST00000552562 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
CBX5-205ENST00000552562 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
CBX5-205ENST00000552562 PLEKHG5O94827 1062 aa10.98□□□□□ -0.65
CBX5-205ENST00000552562 CLCN6P51797 869 aa10.98□□□□□ -0.65
CBX5-205ENST00000552562 CARD14Q9BXL6 1004 aa10.98□□□□□ -0.65
CBX5-205ENST00000552562 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
CBX5-205ENST00000552562 USP6P35125 1406 aa10.98□□□□□ -0.65
CBX5-205ENST00000552562 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
CBX5-205ENST00000552562 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
CBX5-205ENST00000552562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
CBX5-205ENST00000552562 PXDNQ92626 1479 aa10.97□□□□□ -0.65
CBX5-205ENST00000552562 KIF1AQ12756 1690 aa10.97□□□□□ -0.65
CBX5-205ENST00000552562 RGPD8O14715 1765 aaPredicted RBP10.97□□□□□ -0.65
CBX5-205ENST00000552562 TTC21BQ7Z4L5 1316 aa10.96□□□□□ -0.65
CBX5-205ENST00000552562 NUTM2GQ5VZR2 741 aa10.96□□□□□ -0.65
CBX5-205ENST00000552562 CREBZFQ9NS37 354 aa10.96□□□□□ -0.65
CBX5-205ENST00000552562 ITSN1Q15811 1721 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 AHDC1Q5TGY3 1603 aaPredicted RBP10.95□□□□□ -0.66
CBX5-205ENST00000552562 SSH2Q76I76 1423 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 NME9Q86XW9 330 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
CBX5-205ENST00000552562 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 MYOM1P52179 1685 aa10.95□□□□□ -0.66
CBX5-205ENST00000552562 SBNO1A3KN83 1393 aa10.94□□□□□ -0.66
CBX5-205ENST00000552562 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
CBX5-205ENST00000552562 ABTB2Q8N961 1025 aa10.94□□□□□ -0.66
CBX5-205ENST00000552562 NHSL1Q5SYE7 1610 aa10.94□□□□□ -0.66
CBX5-205ENST00000552562 TNS3Q68CZ2 1445 aa10.93□□□□□ -0.66
CBX5-205ENST00000552562 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
CBX5-205ENST00000552562 COL16A1Q07092 1604 aaPredicted RBP10.92□□□□□ -0.66
CBX5-205ENST00000552562 TTC21AQ8NDW8 1320 aa10.92□□□□□ -0.66
CBX5-205ENST00000552562 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
CBX5-205ENST00000552562 NLRP6P59044 892 aa10.92□□□□□ -0.66
CBX5-205ENST00000552562 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
CBX5-205ENST00000552562 GGNBP2Q9H3C7 697 aa10.92□□□□□ -0.66
CBX5-205ENST00000552562 KNSTRNQ9Y448 316 aa10.92□□□□□ -0.66
CBX5-205ENST00000552562 PHLPP1O60346 1717 aa10.92□□□□□ -0.66
CBX5-205ENST00000552562 BRD4O60885 1362 aaPredicted RBP10.91□□□□□ -0.66
CBX5-205ENST00000552562 PNPLA6Q8IY17 1366 aa10.91□□□□□ -0.66
CBX5-205ENST00000552562 FYB1O15117 783 aa10.91□□□□□ -0.66
CBX5-205ENST00000552562 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
CBX5-205ENST00000552562 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
CBX5-205ENST00000552562 ARHGEF10O15013 1369 aa10.9□□□□□ -0.66
CBX5-205ENST00000552562 CGNL1Q0VF96 1302 aa10.9□□□□□ -0.66
CBX5-205ENST00000552562 SOX12O15370 315 aa10.9□□□□□ -0.66
CBX5-205ENST00000552562 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.66
CBX5-205ENST00000552562 JCADQ9P266 1359 aa10.9□□□□□ -0.67
CBX5-205ENST00000552562 TRPM3Q9HCF6 1732 aaPredicted RBP10.89□□□□□ -0.67
CBX5-205ENST00000552562 NUTM2BA6NNL0 878 aaPredicted RBP10.89□□□□□ -0.67
CBX5-205ENST00000552562 NUTM2EB1AL46 878 aaPredicted RBP10.89□□□□□ -0.67
CBX5-205ENST00000552562 AMER1Q5JTC6 1135 aaPredicted RBP10.89□□□□□ -0.67
CBX5-205ENST00000552562 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
CBX5-205ENST00000552562 NUTM2AQ8IVF1 878 aaPredicted RBP10.89□□□□□ -0.67
CBX5-205ENST00000552562 DCBLD2Q96PD2 775 aa10.89□□□□□ -0.67
CBX5-205ENST00000552562 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms