RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CUL7Q14999 1698 aa18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 CCDC192P0DO97 292 aa18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 NOB1Q9ULX3 412 aaKnown RBP18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 HOOK1Q9UJC3 728 aaKnown RBP18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 ERC2O15083 957 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 HSP90AB4PQ58FF6 505 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 PDCL2Q8N4E4 241 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 C1orf115Q9H7X2 142 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 WDR33Q9C0J8 1336 aaKnown RBP18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 CLSTN1O94985 981 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 PDCP20941 246 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 ATF7IPQ6VMQ6 1270 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 ANKRD20A12PQ8NF67 263 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 ARHGEF11O15085 1522 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 WDR63Q8IWG1 891 aa18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 NGDNQ8NEJ9 315 aaKnown RBP18.97■□□□□ 0.63
RBFOX1-212ENST00000550418 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.96■□□□□ 0.63
RBFOX1-212ENST00000550418 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
RBFOX1-212ENST00000550418 TSR2Q969E8 191 aaKnown RBP18.96■□□□□ 0.63
RBFOX1-212ENST00000550418 CLCN1P35523 988 aa18.96■□□□□ 0.63
RBFOX1-212ENST00000550418 HMOX1P09601 288 aa18.95■□□□□ 0.62
RBFOX1-212ENST00000550418 TRIM29Q14134 588 aa18.95■□□□□ 0.62
RBFOX1-212ENST00000550418 KIAA1107Q9UPP5 1409 aa18.95■□□□□ 0.62
RBFOX1-212ENST00000550418 GGNBP2Q9H3C7 697 aa18.95■□□□□ 0.62
RBFOX1-212ENST00000550418 NECTIN2Q92692 538 aa18.94■□□□□ 0.62
RBFOX1-212ENST00000550418 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
RBFOX1-212ENST00000550418 XPCQ01831 940 aaPredicted RBP18.94■□□□□ 0.62
RBFOX1-212ENST00000550418 TAF3Q5VWG9 929 aa18.94■□□□□ 0.62
RBFOX1-212ENST00000550418 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
RBFOX1-212ENST00000550418 SYCE3A1L190 88 aa18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 SYNE3Q6ZMZ3 975 aa18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 LRRFIP1Q32MZ4 808 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 AK7Q96M32 723 aa18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 AKAP17AQ02040 695 aaKnown RBP18.93■□□□□ 0.62
RBFOX1-212ENST00000550418 PSMA5P28066 241 aa18.92■□□□□ 0.62
RBFOX1-212ENST00000550418 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
RBFOX1-212ENST00000550418 RUFY1Q96T51 708 aa18.92■□□□□ 0.62
RBFOX1-212ENST00000550418 FOSBP53539 338 aa18.92■□□□□ 0.62
RBFOX1-212ENST00000550418 CCP110O43303 1012 aa18.92■□□□□ 0.62
RBFOX1-212ENST00000550418 LEKR1Q6ZMV7 388 aa18.91■□□□□ 0.62
RBFOX1-212ENST00000550418 CBX1P83916 185 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 TEFQ10587 303 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 CNTROBQ8N137 903 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 ABCC5O15440 1437 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 ERCC4Q92889 916 aaPredicted RBP18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 TNPO1Q92973 898 aaKnown RBP18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 SMC2O95347 1197 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 NEXNQ0ZGT2 675 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 PDILTQ8N807 584 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
RBFOX1-212ENST00000550418 GNAI3P08754 354 aa18.89■□□□□ 0.61
RBFOX1-212ENST00000550418 OLFM4Q6UX06 510 aa18.89■□□□□ 0.61
RBFOX1-212ENST00000550418 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
RBFOX1-212ENST00000550418 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 H0YHG0 523 aa18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 UBTFL1P0CB47 393 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 PCMTD1Q96MG8 357 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 TNMDQ9H2S6 317 aa18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 TWISTNBQ3B726 338 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 CEP89Q96ST8 783 aa18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 PDE4CQ08493 712 aa18.88■□□□□ 0.61
RBFOX1-212ENST00000550418 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
RBFOX1-212ENST00000550418 KRT85P78386 507 aa18.87■□□□□ 0.61
RBFOX1-212ENST00000550418 PATL2C9JE40 543 aaKnown RBP18.86■□□□□ 0.61
RBFOX1-212ENST00000550418 TRDNQ13061 729 aa18.86■□□□□ 0.61
RBFOX1-212ENST00000550418 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
RBFOX1-212ENST00000550418 SURF6O75683 361 aaKnown RBP18.86■□□□□ 0.61
RBFOX1-212ENST00000550418 AEBP1Q8IUX7 1158 aa18.86■□□□□ 0.61
RBFOX1-212ENST00000550418 DHX8Q14562 1220 aaKnown RBP18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 CLASRPQ8N2M8 674 aaKnown RBP18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 CABP2Q9NPB3 220 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 MCM5P33992 734 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 APPP05067 770 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 SSFA2P28290 1259 aa18.85■□□□□ 0.61
RBFOX1-212ENST00000550418 NCOA1Q15788 1441 aa18.84■□□□□ 0.61
RBFOX1-212ENST00000550418 MEX3CQ5U5Q3 659 aaKnown RBP18.84■□□□□ 0.61
RBFOX1-212ENST00000550418 ERICH4A6NGS2 130 aa18.83■□□□□ 0.61
RBFOX1-212ENST00000550418 TBC1D32Q96NH3 1257 aa18.83■□□□□ 0.61
RBFOX1-212ENST00000550418 DYNC1I1O14576 645 aa18.83■□□□□ 0.6
RBFOX1-212ENST00000550418 CAMSAP2Q08AD1 1489 aa18.83■□□□□ 0.6
RBFOX1-212ENST00000550418 ERBINQ96RT1 1412 aa18.83■□□□□ 0.6
RBFOX1-212ENST00000550418 ANKRD30BQ9BXX2 1392 aa18.82■□□□□ 0.6
RBFOX1-212ENST00000550418 PLEKHH2Q8IVE3 1493 aa18.82■□□□□ 0.6
RBFOX1-212ENST00000550418 CDR1P51861 262 aa18.82■□□□□ 0.6
RBFOX1-212ENST00000550418 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
RBFOX1-212ENST00000550418 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 SAFBQ15424 915 aaKnown RBP eCLIP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 CCDC47Q96A33 483 aaKnown RBP18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 CYP46A1Q9Y6A2 500 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 MARCH6O60337 910 aa18.81■□□□□ 0.6
RBFOX1-212ENST00000550418 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms