RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
CPSF7-222ENST00000544585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.7□□□□□ -0.86
CPSF7-222ENST00000544585 CDCA7LQ96GN5 454 aa9.7□□□□□ -0.86
CPSF7-222ENST00000544585 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
CPSF7-222ENST00000544585 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
CPSF7-222ENST00000544585 C3P01024 1663 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 KIF14Q15058 1648 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 CAMSAP1Q5T5Y3 1602 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 PPP2R2DQ66LE6 453 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 SPIRE2Q8WWL2 714 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 PRM3Q9NNZ6 103 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 LIMD1Q9UGP4 676 aa9.69□□□□□ -0.86
CPSF7-222ENST00000544585 PLA2R1Q13018 1463 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 ARHGAP35Q9NRY4 1499 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 HSPA1LP34931 641 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 PIP4K2BP78356 416 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 NECTIN2Q92692 538 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
CPSF7-222ENST00000544585 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-222ENST00000544585 ANKLE2Q86XL3 938 aa9.67□□□□□ -0.86
CPSF7-222ENST00000544585 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
CPSF7-222ENST00000544585 SULF1Q8IWU6 871 aa9.67□□□□□ -0.86
CPSF7-222ENST00000544585 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
CPSF7-222ENST00000544585 ADAM33Q9BZ11 813 aa9.67□□□□□ -0.86
CPSF7-222ENST00000544585 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
CPSF7-222ENST00000544585 THEMISQ8N1K5 641 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-222ENST00000544585 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
CPSF7-222ENST00000544585 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
CPSF7-222ENST00000544585 KIAA1107Q9UPP5 1409 aa9.65□□□□□ -0.86
CPSF7-222ENST00000544585 ABCA6Q8N139 1617 aa9.65□□□□□ -0.86
CPSF7-222ENST00000544585 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
CPSF7-222ENST00000544585 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-222ENST00000544585 TCOF1Q13428 1488 aaKnown RBP9.65□□□□□ -0.87
CPSF7-222ENST00000544585 SPTLC1O15269 473 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 NUDT7P0C024 238 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 CD46P15529 392 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
CPSF7-222ENST00000544585 KIDINS220Q9ULH0 1771 aa9.63□□□□□ -0.87
CPSF7-222ENST00000544585 ABCC1P33527 1531 aa9.63□□□□□ -0.87
CPSF7-222ENST00000544585 RSPH4AQ5TD94 716 aa9.63□□□□□ -0.87
CPSF7-222ENST00000544585 RSBN1LQ6PCB5 846 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-222ENST00000544585 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
CPSF7-222ENST00000544585 A2MP01023 1474 aa9.62□□□□□ -0.87
CPSF7-222ENST00000544585 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
CPSF7-222ENST00000544585 DDX11L8A8MPP1 907 aa9.62□□□□□ -0.87
CPSF7-222ENST00000544585 ABL2P42684 1182 aa9.62□□□□□ -0.87
CPSF7-222ENST00000544585 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
CPSF7-222ENST00000544585 EYA1Q99502 592 aa9.62□□□□□ -0.87
CPSF7-222ENST00000544585 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
CPSF7-222ENST00000544585 RIMBP2O15034 1052 aa9.61□□□□□ -0.87
CPSF7-222ENST00000544585 DOK7Q18PE1 504 aa9.61□□□□□ -0.87
CPSF7-222ENST00000544585 AEBP1Q8IUX7 1158 aa9.61□□□□□ -0.87
CPSF7-222ENST00000544585 SAMD9LQ8IVG5 1584 aa9.61□□□□□ -0.87
CPSF7-222ENST00000544585 GPATCH8Q9UKJ3 1502 aaKnown RBP9.61□□□□□ -0.87
CPSF7-222ENST00000544585 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 KIF3BO15066 747 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 AP1G2O75843 785 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 DNAJB2P25686 324 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 GJA5P36382 358 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 ARSIQ5FYB1 569 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 DHX29Q7Z478 1369 aaKnown RBP9.6□□□□□ -0.87
CPSF7-222ENST00000544585 CCNB3Q8WWL7 1395 aa9.6□□□□□ -0.87
CPSF7-222ENST00000544585 SHANK2Q9UPX8 1470 aa9.59□□□□□ -0.87
CPSF7-222ENST00000544585 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 WASHC2CQ9Y4E1 1318 aa9.59□□□□□ -0.87
CPSF7-222ENST00000544585 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 PPP1R15AO75807 674 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-222ENST00000544585 RETREG2Q8NC44 543 aa9.59□□□□□ -0.87
CPSF7-222ENST00000544585 CPS1P31327 1500 aa9.59□□□□□ -0.87
CPSF7-222ENST00000544585 PREX2Q70Z35 1606 aa9.59□□□□□ -0.87
CPSF7-222ENST00000544585 CEP170BQ9Y4F5 1589 aaPredicted RBP9.58□□□□□ -0.88
CPSF7-222ENST00000544585 ITSN2Q9NZM3 1697 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 NBPF26B4DH59 902 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 LILRB3O75022 631 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 QPCTQ16769 361 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 NUDT18Q6ZVK8 323 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPSF7-222ENST00000544585 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 TNRQ92752 1358 aa9.58□□□□□ -0.88
CPSF7-222ENST00000544585 RTEL1-TNFRSF6BF6WH68 1400 aa9.57□□□□□ -0.88
CPSF7-222ENST00000544585 NDUFV2P19404 249 aa9.57□□□□□ -0.88
CPSF7-222ENST00000544585 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
CPSF7-222ENST00000544585 TBC1D2BQ9UPU7 963 aa9.57□□□□□ -0.88
CPSF7-222ENST00000544585 MIA2Q96PC5 1412 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 SUPT6HQ7KZ85 1726 aaKnown RBP9.56□□□□□ -0.88
CPSF7-222ENST00000544585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.56□□□□□ -0.881e-11■■□□□ 12.1
CPSF7-222ENST00000544585 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 COL9A1P20849 921 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 PDE4CQ08493 712 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 ZNF710Q8N1W2 664 aa9.56□□□□□ -0.88
CPSF7-222ENST00000544585 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms