RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 NALCNQ8IZF0 1738 aa13.39□□□□□ -0.27
MRE11-208ENST00000538923 ATMINO43313 823 aaPredicted RBP13.39□□□□□ -0.27
MRE11-208ENST00000538923 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
MRE11-208ENST00000538923 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
MRE11-208ENST00000538923 ROBO2Q9HCK4 1378 aa13.39□□□□□ -0.27
MRE11-208ENST00000538923 HFM1A2PYH4 1435 aa13.39□□□□□ -0.27
MRE11-208ENST00000538923 RBM6P78332 1123 aaKnown RBP13.38□□□□□ -0.27
MRE11-208ENST00000538923 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
MRE11-208ENST00000538923 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
MRE11-208ENST00000538923 ATN1P54259 1190 aaPredicted RBP13.37□□□□□ -0.27
MRE11-208ENST00000538923 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
MRE11-208ENST00000538923 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
MRE11-208ENST00000538923 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
MRE11-208ENST00000538923 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
MRE11-208ENST00000538923 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
MRE11-208ENST00000538923 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
MRE11-208ENST00000538923 RGS12O14924 1447 aa13.36□□□□□ -0.27
MRE11-208ENST00000538923 LAMC1P11047 1609 aa13.35□□□□□ -0.27
MRE11-208ENST00000538923 KIF1BO60333 1816 aa13.34□□□□□ -0.27
MRE11-208ENST00000538923 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
MRE11-208ENST00000538923 USP21Q9UK80 565 aa13.33□□□□□ -0.28
MRE11-208ENST00000538923 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
MRE11-208ENST00000538923 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
MRE11-208ENST00000538923 ESCO1Q5FWF5 840 aa13.31□□□□□ -0.28
MRE11-208ENST00000538923 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
MRE11-208ENST00000538923 ATAD2Q6PL18 1390 aa13.31□□□□□ -0.28
MRE11-208ENST00000538923 CDC42BPGQ6DT37 1551 aa13.3□□□□□ -0.28
MRE11-208ENST00000538923 MKRN3Q13064 507 aaKnown RBP13.3□□□□□ -0.28
MRE11-208ENST00000538923 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
MRE11-208ENST00000538923 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
MRE11-208ENST00000538923 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
MRE11-208ENST00000538923 TECPR2O15040 1411 aa13.29□□□□□ -0.28
MRE11-208ENST00000538923 MYOM2P54296 1465 aa13.29□□□□□ -0.28
MRE11-208ENST00000538923 COL22A1Q8NFW1 1626 aaPredicted RBP13.28□□□□□ -0.28
MRE11-208ENST00000538923 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
MRE11-208ENST00000538923 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
MRE11-208ENST00000538923 ADGRF5Q8IZF2 1346 aa13.28□□□□□ -0.28
MRE11-208ENST00000538923 PPLO60437 1756 aa13.27□□□□□ -0.28
MRE11-208ENST00000538923 FOXO3O43524 673 aa13.27□□□□□ -0.29
MRE11-208ENST00000538923 RGL3Q3MIN7 710 aa13.27□□□□□ -0.29
MRE11-208ENST00000538923 STK26Q9P289 416 aa13.27□□□□□ -0.29
MRE11-208ENST00000538923 ATRNO75882 1429 aa13.27□□□□□ -0.29
MRE11-208ENST00000538923 PXDNQ92626 1479 aa13.27□□□□□ -0.29
MRE11-208ENST00000538923 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
MRE11-208ENST00000538923 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
MRE11-208ENST00000538923 XPCQ01831 940 aaPredicted RBP13.25□□□□□ -0.29
MRE11-208ENST00000538923 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
MRE11-208ENST00000538923 BCL9LQ86UU0 1499 aa13.24□□□□□ -0.29
MRE11-208ENST00000538923 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
MRE11-208ENST00000538923 SLC39A7Q92504 469 aa13.24□□□□□ -0.29
MRE11-208ENST00000538923 MPHOSPH9Q99550 1183 aa13.24□□□□□ -0.29
MRE11-208ENST00000538923 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
MRE11-208ENST00000538923 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
MRE11-208ENST00000538923 IER5LQ5T953 404 aa13.22□□□□□ -0.29
MRE11-208ENST00000538923 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
MRE11-208ENST00000538923 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
MRE11-208ENST00000538923 GJD4Q96KN9 370 aaPredicted RBP13.22□□□□□ -0.29
MRE11-208ENST00000538923 PLEKHH1Q9ULM0 1364 aa13.21□□□□□ -0.29
MRE11-208ENST00000538923 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
MRE11-208ENST00000538923 ACIN1Q9UKV3 1341 aaKnown RBP13.21□□□□□ -0.29
MRE11-208ENST00000538923 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
MRE11-208ENST00000538923 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
MRE11-208ENST00000538923 SOX12O15370 315 aa13.2□□□□□ -0.3
MRE11-208ENST00000538923 C7P10643 843 aa13.19□□□□□ -0.3
MRE11-208ENST00000538923 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
MRE11-208ENST00000538923 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
MRE11-208ENST00000538923 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.19□□□□□ -0.3
MRE11-208ENST00000538923 METRNQ9UJH8 293 aa13.19□□□□□ -0.3
MRE11-208ENST00000538923 PSME1Q06323 249 aa13.18□□□□□ -0.3
MRE11-208ENST00000538923 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
MRE11-208ENST00000538923 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
MRE11-208ENST00000538923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.35e-7■■■■□ 22.5
MRE11-208ENST00000538923 KNDC1Q76NI1 1749 aa13.18□□□□□ -0.3
MRE11-208ENST00000538923 DHX57Q6P158 1386 aaKnown RBP13.18□□□□□ -0.3
MRE11-208ENST00000538923 SLIT2O94813 1529 aa13.18□□□□□ -0.3
MRE11-208ENST00000538923 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
MRE11-208ENST00000538923 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
MRE11-208ENST00000538923 SEC24BO95487 1268 aa13.17□□□□□ -0.3
MRE11-208ENST00000538923 HAP1P54257 671 aaPredicted RBP13.17□□□□□ -0.3
MRE11-208ENST00000538923 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
MRE11-208ENST00000538923 SRCAPQ6ZRS2 3230 aa13.17□□□□□ -0.3
MRE11-208ENST00000538923 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
MRE11-208ENST00000538923 EP400Q96L91 3159 aa13.16□□□□□ -0.3
MRE11-208ENST00000538923 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
MRE11-208ENST00000538923 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
MRE11-208ENST00000538923 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
MRE11-208ENST00000538923 PLCG2P16885 1265 aa13.15□□□□□ -0.3
MRE11-208ENST00000538923 NLRP6P59044 892 aa13.15□□□□□ -0.3
MRE11-208ENST00000538923 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
MRE11-208ENST00000538923 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
MRE11-208ENST00000538923 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
MRE11-208ENST00000538923 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
MRE11-208ENST00000538923 CFAP70Q5T0N1 1121 aa13.14□□□□□ -0.31
MRE11-208ENST00000538923 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
MRE11-208ENST00000538923 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
MRE11-208ENST00000538923 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
MRE11-208ENST00000538923 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
MRE11-208ENST00000538923 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
MRE11-208ENST00000538923 VPS72Q15906 364 aa13.13□□□□□ -0.31
MRE11-208ENST00000538923 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms