RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CYB5RLQ6IPT4 315 aa6.83□□□□□ -1.32
SNHG1-208ENST00000538266 RSBN1LQ6PCB5 846 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-208ENST00000538266 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-208ENST00000538266 MTRQ99707 1265 aa6.83□□□□□ -1.32
SNHG1-208ENST00000538266 PCDHB15Q9Y5E8 787 aa6.83□□□□□ -1.32
SNHG1-208ENST00000538266 CEP162Q5TB80 1403 aa6.83□□□□□ -1.32
SNHG1-208ENST00000538266 ARHGAP35Q9NRY4 1499 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 GJA5P36382 358 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 CLK2P49760 499 aaKnown RBP6.82□□□□□ -1.32
SNHG1-208ENST00000538266 TJAP1Q5JTD0 557 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 IL21Q9HBE4 155 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 PLSCR2Q9NRY7 297 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 LIMD1Q9UGP4 676 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 FHOD3Q2V2M9 1422 aa6.82□□□□□ -1.32
SNHG1-208ENST00000538266 ZNF516Q92618 1163 aa6.81□□□□□ -1.32
SNHG1-208ENST00000538266 NUTM2BA6NNL0 878 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-208ENST00000538266 NUTM2EB1AL46 878 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-208ENST00000538266 C6orf229H3BNL8 230 aa6.8□□□□□ -1.32
SNHG1-208ENST00000538266 ZPR1O75312 459 aa6.8□□□□□ -1.32
SNHG1-208ENST00000538266 Q3C1V9 767 aa6.8□□□□□ -1.32
SNHG1-208ENST00000538266 NUTM2DQ5VT03 806 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-208ENST00000538266 FMN1Q68DA7 1419 aa6.8□□□□□ -1.32
SNHG1-208ENST00000538266 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
SNHG1-208ENST00000538266 NUTM2AQ8IVF1 878 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-208ENST00000538266 SYMPKQ92797 1274 aaKnown RBP6.8□□□□□ -1.32
SNHG1-208ENST00000538266 UACAQ9BZF9 1416 aa6.79□□□□□ -1.32
SNHG1-208ENST00000538266 FMNL1O95466 1100 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-208ENST00000538266 KCNC4Q03721 635 aa6.79□□□□□ -1.32
SNHG1-208ENST00000538266 TUSC1Q2TAM9 212 aa6.79□□□□□ -1.32
SNHG1-208ENST00000538266 SALL2Q9Y467 1007 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-208ENST00000538266 PLB1Q6P1J6 1458 aa6.79□□□□□ -1.32
SNHG1-208ENST00000538266 ABCC2Q92887 1545 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 HRCP23327 699 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 MTMR2Q13614 643 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 QPCTQ16769 361 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 RNF19BQ6ZMZ0 732 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 SPSB2Q99619 263 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNHG1-208ENST00000538266 ZBTB3Q9H5J0 574 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 RAPGEF6Q8TEU7 1601 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 ADCY10Q96PN6 1610 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 ABCA8O94911 1581 aa6.78□□□□□ -1.32
SNHG1-208ENST00000538266 HECW1Q76N89 1606 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 LILRB3O75022 631 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 PRPF38BQ5VTL8 546 aaKnown RBP6.77□□□□□ -1.33
SNHG1-208ENST00000538266 NKX2-3Q8TAU0 364 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 CABLES1Q8TDN4 633 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 THAP11Q96EK4 314 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 UHRF1BP1LA0JNW5 1464 aa6.77□□□□□ -1.33
SNHG1-208ENST00000538266 SPDYE5A6NIY4 337 aa6.76□□□□□ -1.33
SNHG1-208ENST00000538266 RTL5Q5HYW3 569 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-208ENST00000538266 USB1Q9BQ65 265 aaKnown RBP6.76□□□□□ -1.33
SNHG1-208ENST00000538266 PCF11O94913 1555 aaKnown RBP6.75□□□□□ -1.33
SNHG1-208ENST00000538266 FYCO1Q9BQS8 1478 aa6.75□□□□□ -1.33
SNHG1-208ENST00000538266 ITGBL1O95965 494 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-208ENST00000538266 RETREG3Q86VR2 466 aa6.75□□□□□ -1.33
SNHG1-208ENST00000538266 CASKIN1Q8WXD9 1431 aa6.75□□□□□ -1.33
SNHG1-208ENST00000538266 NUP153P49790 1475 aaKnown RBP6.74□□□□□ -1.33
SNHG1-208ENST00000538266 ARID3CA6NKF2 412 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 TLL1O43897 1013 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 FBXO31Q5XUX0 539 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-208ENST00000538266 PPP2R2DQ66LE6 453 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 FAM160A2Q8N612 972 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-208ENST00000538266 PRR7Q8TB68 274 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 ZCCHC11Q5TAX3 1644 aaKnown RBP6.74□□□□□ -1.33
SNHG1-208ENST00000538266 KDM5BQ9UGL1 1544 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 VPS8Q8N3P4 1428 aa6.74□□□□□ -1.33
SNHG1-208ENST00000538266 CCDC18Q5T9S5 1454 aa6.73□□□□□ -1.33
SNHG1-208ENST00000538266 ADH1BP00325 375 aa6.73□□□□□ -1.33
SNHG1-208ENST00000538266 TSC1Q92574 1164 aa6.73□□□□□ -1.33
SNHG1-208ENST00000538266 SLC6A16Q9GZN6 736 aa6.73□□□□□ -1.33
SNHG1-208ENST00000538266 MAPKBP1O60336 1514 aa6.72□□□□□ -1.33
SNHG1-208ENST00000538266 RFC5P40937 340 aa6.72□□□□□ -1.33
SNHG1-208ENST00000538266 PLA2G2EQ9NZK7 142 aa6.72□□□□□ -1.33
SNHG1-208ENST00000538266 EPRSP07814 1512 aaKnown RBP6.71□□□□□ -1.33
SNHG1-208ENST00000538266 CDK13Q14004 1512 aaKnown RBP6.71□□□□□ -1.33
SNHG1-208ENST00000538266 ASXL2Q76L83 1435 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 CFAP99D6REC4 459 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 AP1G2O75843 785 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 MSS51Q4VC12 460 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 TMEM259Q4ZIN3 620 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 CDK11AQ9UQ88 783 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-208ENST00000538266 ATP10BO94823 1461 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 WDR7Q9Y4E6 1490 aa6.71□□□□□ -1.34
SNHG1-208ENST00000538266 S1PR4O95977 384 aa6.7□□□□□ -1.34
SNHG1-208ENST00000538266 CTDSPL2Q05D32 466 aa6.7□□□□□ -1.34
SNHG1-208ENST00000538266 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 JUNDP17535 347 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 GGCXP38435 758 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 IFFO2Q5TF58 517 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 DESI1Q6ICB0 168 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 HELBQ8NG08 1087 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-208ENST00000538266 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 LRRIQ1Q96JM4 1722 aa6.69□□□□□ -1.34
SNHG1-208ENST00000538266 CFAP43Q8NDM7 1665 aa6.68□□□□□ -1.34
SNHG1-208ENST00000538266 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-208ENST00000538266 MMP16P51512 607 aa6.68□□□□□ -1.34
SNHG1-208ENST00000538266 PRDM9Q9NQV7 894 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms