RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-207ENST00000537965 SOCS7O14512 581 aa8.61□□□□□ -1.03
SNHG1-207ENST00000537965 GNPATO15228 680 aa8.61□□□□□ -1.03
SNHG1-207ENST00000537965 SAMD7Q7Z3H4 446 aa8.61□□□□□ -1.03
SNHG1-207ENST00000537965 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
SNHG1-207ENST00000537965 ADGRG1Q9Y653 693 aa8.61□□□□□ -1.03
SNHG1-207ENST00000537965 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
SNHG1-207ENST00000537965 PLEKHH2Q8IVE3 1493 aa8.6□□□□□ -1.03
SNHG1-207ENST00000537965 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-207ENST00000537965 ZMYM3Q14202 1370 aa8.6□□□□□ -1.03
SNHG1-207ENST00000537965 FYCO1Q9BQS8 1478 aa8.59□□□□□ -1.03
SNHG1-207ENST00000537965 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
SNHG1-207ENST00000537965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
SNHG1-207ENST00000537965 RBM46Q8TBY0 533 aaKnown RBP8.59□□□□□ -1.03
SNHG1-207ENST00000537965 TSR3Q9UJK0 312 aaKnown RBP8.59□□□□□ -1.03
SNHG1-207ENST00000537965 NCOA1Q15788 1441 aa8.59□□□□□ -1.03
SNHG1-207ENST00000537965 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
SNHG1-207ENST00000537965 ADGBQ8N7X0 1667 aa8.59□□□□□ -1.03
SNHG1-207ENST00000537965 CAMSAP1Q5T5Y3 1602 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 KIAA1107Q9UPP5 1409 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 FECHP22830 423 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 NYAP1Q6ZVC0 841 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 WBP1LQ9NX94 342 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 CFDP1Q9UEE9 299 aaPredicted RBP8.58□□□□□ -1.04
SNHG1-207ENST00000537965 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 CLTCQ00610 1675 aaKnown RBP8.58□□□□□ -1.04
SNHG1-207ENST00000537965 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
SNHG1-207ENST00000537965 SPATA31D1Q6ZQQ2 1576 aa8.57□□□□□ -1.04
SNHG1-207ENST00000537965 ZNF142P52746 1687 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-207ENST00000537965 SLC24A1O60721 1099 aa8.57□□□□□ -1.04
SNHG1-207ENST00000537965 OATP04181 439 aa8.57□□□□□ -1.04
SNHG1-207ENST00000537965 HNRNPMP52272 730 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNHG1-207ENST00000537965 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
SNHG1-207ENST00000537965 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
SNHG1-207ENST00000537965 SYCP2Q9BX26 1530 aa8.56□□□□□ -1.04
SNHG1-207ENST00000537965 GPATCH8Q9UKJ3 1502 aaKnown RBP8.56□□□□□ -1.04
SNHG1-207ENST00000537965 ILDR2Q71H61 639 aa8.56□□□□□ -1.04
SNHG1-207ENST00000537965 CCNB3Q8WWL7 1395 aa8.56□□□□□ -1.04
SNHG1-207ENST00000537965 PLA2R1Q13018 1463 aa8.56□□□□□ -1.04
SNHG1-207ENST00000537965 DNAJB2P25686 324 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 PPP4CP60510 307 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 SWT1Q5T5J6 900 aaKnown RBP8.55□□□□□ -1.04
SNHG1-207ENST00000537965 GGT6Q6P531 493 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 PXYLP1Q8TE99 480 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 A2MP01023 1474 aa8.55□□□□□ -1.04
SNHG1-207ENST00000537965 MYO3AQ8NEV4 1616 aa8.54□□□□□ -1.04
SNHG1-207ENST00000537965 INO80Q9ULG1 1556 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-207ENST00000537965 MTUS2Q5JR59 1369 aa8.54□□□□□ -1.04
SNHG1-207ENST00000537965 RCCD1A6NED2 376 aa8.54□□□□□ -1.04
SNHG1-207ENST00000537965 UBAP1LF5GYI3 381 aa8.54□□□□□ -1.04
SNHG1-207ENST00000537965 TMEM134Q9H6X4 195 aa8.54□□□□□ -1.04
SNHG1-207ENST00000537965 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
SNHG1-207ENST00000537965 CEP170BQ9Y4F5 1589 aaPredicted RBP8.53□□□□□ -1.04
SNHG1-207ENST00000537965 RSPH4AQ5TD94 716 aa8.53□□□□□ -1.04
SNHG1-207ENST00000537965 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
SNHG1-207ENST00000537965 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
SNHG1-207ENST00000537965 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
SNHG1-207ENST00000537965 POLR1AO95602 1720 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-207ENST00000537965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
SNHG1-207ENST00000537965 RTEL1-TNFRSF6BF6WH68 1400 aa8.52□□□□□ -1.05
SNHG1-207ENST00000537965 PTPRKQ15262 1439 aa8.52□□□□□ -1.05
SNHG1-207ENST00000537965 ZNF335Q9H4Z2 1342 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-207ENST00000537965 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
SNHG1-207ENST00000537965 FAM135AQ9P2D6 1515 aa8.51□□□□□ -1.05
SNHG1-207ENST00000537965 CFAP65Q6ZU64 1925 aaKnown RBP8.51□□□□□ -1.05
SNHG1-207ENST00000537965 TOM1O60784 492 aa8.51□□□□□ -1.05
SNHG1-207ENST00000537965 SLC4A3P48751 1232 aa8.51□□□□□ -1.05
SNHG1-207ENST00000537965 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
SNHG1-207ENST00000537965 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
SNHG1-207ENST00000537965 RNF40O75150 1001 aa8.5□□□□□ -1.05
SNHG1-207ENST00000537965 IFFO2Q5TF58 517 aa8.5□□□□□ -1.05
SNHG1-207ENST00000537965 DNMT1P26358 1616 aaKnown RBP8.5□□□□□ -1.05
SNHG1-207ENST00000537965 DHX29Q7Z478 1369 aaKnown RBP8.49□□□□□ -1.05
SNHG1-207ENST00000537965 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-207ENST00000537965 MAP2K5Q13163 448 aa8.49□□□□□ -1.05
SNHG1-207ENST00000537965 THEMISQ8N1K5 641 aaPredicted RBP8.49□□□□□ -1.05
SNHG1-207ENST00000537965 CPS1P31327 1500 aa8.49□□□□□ -1.05
SNHG1-207ENST00000537965 EHBP1L1Q8N3D4 1523 aa8.49□□□□□ -1.05
SNHG1-207ENST00000537965 KIF3BO15066 747 aa8.48□□□□□ -1.05
SNHG1-207ENST00000537965 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
SNHG1-207ENST00000537965 IRF6O14896 467 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 TSPY4P0CV99 314 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 TSPY10P0CW01 314 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
SNHG1-207ENST00000537965 WASHC2CQ9Y4E1 1318 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 TIAM1Q13009 1591 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 TNRQ92752 1358 aa8.47□□□□□ -1.05
SNHG1-207ENST00000537965 CEP162Q5TB80 1403 aa8.46□□□□□ -1.05
SNHG1-207ENST00000537965 MBD5Q9P267 1494 aa8.46□□□□□ -1.05
SNHG1-207ENST00000537965 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.05
SNHG1-207ENST00000537965 APLP1P51693 650 aa8.46□□□□□ -1.06
SNHG1-207ENST00000537965 PHOX2BQ99453 314 aa8.46□□□□□ -1.06
SNHG1-207ENST00000537965 PZPP20742 1482 aa8.45□□□□□ -1.06
SNHG1-207ENST00000537965 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
SNHG1-207ENST00000537965 SHANK2Q9UPX8 1470 aa8.45□□□□□ -1.06
SNHG1-207ENST00000537965 DEPDC5O75140 1603 aa8.45□□□□□ -1.06
SNHG1-207ENST00000537965 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-207ENST00000537965 ZNF644Q9H582 1327 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-207ENST00000537965 NLRP1Q9C000 1473 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms