RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 CDC42BPGQ6DT37 1551 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 NBR1Q14596 966 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 LRP6O75581 1613 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 NUBP1P53384 320 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 TOPAZ1Q8N9V7 1692 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 PTPRUQ92729 1446 aa5.25□□□□□ -1.57
SEC23A-202ENST00000537403 USP32Q8NFA0 1604 aa5.24□□□□□ -1.57
SEC23A-202ENST00000537403 ROCK2O75116 1388 aaKnown RBP5.24□□□□□ -1.57
SEC23A-202ENST00000537403 PAK3O75914 559 aaPredicted RBP5.24□□□□□ -1.57
SEC23A-202ENST00000537403 DCAF8Q5TAQ9 597 aa5.24□□□□□ -1.57
SEC23A-202ENST00000537403 NUTM2DQ5VT03 806 aaPredicted RBP5.24□□□□□ -1.57
SEC23A-202ENST00000537403 FBXO31Q5XUX0 539 aaPredicted RBP5.24□□□□□ -1.57
SEC23A-202ENST00000537403 RGS3P49796 1198 aa5.24□□□□□ -1.57
SEC23A-202ENST00000537403 CCER2I3L3R5 266 aa5.24□□□□□ -1.57
SEC23A-202ENST00000537403 U2AF1L5P0DN76 240 aaPredicted RBP5.23□□□□□ -1.57
SEC23A-202ENST00000537403 MS4A1P11836 297 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 U2AF1Q01081 240 aaKnown RBP eCLIP5.23□□□□□ -1.572e-9■■■□□ 16
SEC23A-202ENST00000537403 KIF1AQ12756 1690 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 USP54Q70EL1 1684 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 PPP4R2Q9NY27 417 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 FARP1Q9Y4F1 1045 aaPredicted RBP5.23□□□□□ -1.57
SEC23A-202ENST00000537403 NWD2Q9ULI1 1742 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 ALS2Q96Q42 1657 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 PTCH1Q13635 1447 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 BECN1Q14457 450 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 CHMP4BQ9H444 224 aaKnown RBP5.23□□□□□ -1.57
SEC23A-202ENST00000537403 EID1Q9Y6B2 187 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 WNK3Q9BYP7 1800 aa5.23□□□□□ -1.57
SEC23A-202ENST00000537403 KTN1Q86UP2 1357 aaKnown RBP5.22□□□□□ -1.57
SEC23A-202ENST00000537403 NPHP1O15259 732 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 RGS17Q9UGC6 210 aaPredicted RBP5.22□□□□□ -1.57
SEC23A-202ENST00000537403 LTKP29376 864 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 EVX2Q03828 476 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 RTF1Q92541 710 aaKnown RBP5.22□□□□□ -1.57
SEC23A-202ENST00000537403 KIAA1210Q9ULL0 1709 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 TECPR2O15040 1411 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 B4GALNT3Q6L9W6 998 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 TRAK1Q9UPV9 953 aa5.22□□□□□ -1.57
SEC23A-202ENST00000537403 PLCH1Q4KWH8 1693 aa5.21□□□□□ -1.57
SEC23A-202ENST00000537403 NUTM2FA1L443 756 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 OS9Q13438 667 aaPredicted RBP5.21□□□□□ -1.58
SEC23A-202ENST00000537403 DDRGK1Q96HY6 314 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 ANKRD50Q9ULJ7 1429 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 CASC1Q6TDU7 716 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 TERF2IPQ9NYB0 399 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 CSB-PGBD3P0DP91 1061 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 RALBP1Q15311 655 aa5.21□□□□□ -1.58
SEC23A-202ENST00000537403 NGDNQ8NEJ9 315 aaKnown RBP5.21□□□□□ -1.58
SEC23A-202ENST00000537403 THEMISQ8N1K5 641 aaPredicted RBP5.2□□□□□ -1.58
SEC23A-202ENST00000537403 RGPD3A6NKT7 1758 aaPredicted RBP5.2□□□□□ -1.58
SEC23A-202ENST00000537403 RGPD8O14715 1765 aaPredicted RBP5.2□□□□□ -1.58
SEC23A-202ENST00000537403 RGPD4Q7Z3J3 1758 aa5.2□□□□□ -1.58
SEC23A-202ENST00000537403 ST20-MTHFSA0A0A6YYL1 179 aa5.2□□□□□ -1.58
SEC23A-202ENST00000537403 MST1RQ04912 1400 aa5.2□□□□□ -1.58
SEC23A-202ENST00000537403 FXR2P51116 673 aaKnown RBP eCLIP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 NCLP19338 710 aaKnown RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 LRP5O75197 1615 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 NAIPQ13075 1403 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 RIMS2Q9UQ26 1411 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 BRWD3Q6RI45 1802 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 PXDNQ92626 1479 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 COL24A1Q17RW2 1714 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 ARHGEF28Q8N1W1 1705 aaKnown RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 TNS1Q9HBL0 1735 aaKnown RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 EIF3AQ14152 1382 aaKnown RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 GOLGA6L22H0YM25 854 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 VGFO15240 615 aaPredicted RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 EIF5BO60841 1220 aaKnown RBP5.19□□□□□ -1.58
SEC23A-202ENST00000537403 PCDHB8Q9UN66 801 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 PCDHB13Q9Y5F0 798 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 CCDC144AA2RUR9 1427 aa5.19□□□□□ -1.58
SEC23A-202ENST00000537403 DLC1Q96QB1 1528 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 ANKLE2Q86XL3 938 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 HFM1A2PYH4 1435 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 ADGRB1O14514 1584 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 IPO8O15397 1037 aaKnown RBP5.18□□□□□ -1.58
SEC23A-202ENST00000537403 SPATA31E1Q6ZUB1 1445 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 NLRP13Q86W25 1043 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 RREB1Q92766 1687 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 THSD7AQ9UPZ6 1657 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 HSPA1LP34931 641 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 KCNJ4P48050 445 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 CALD1Q05682 793 aaKnown RBP5.18□□□□□ -1.58
SEC23A-202ENST00000537403 MYOM2P54296 1465 aa5.18□□□□□ -1.58
SEC23A-202ENST00000537403 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.18□□□□□ -1.587e-7■□□□□ 10.5
SEC23A-202ENST00000537403 DHX57Q6P158 1386 aaKnown RBP5.17□□□□□ -1.58
SEC23A-202ENST00000537403 PHRF1Q9P1Y6 1649 aaKnown RBP5.17□□□□□ -1.58
SEC23A-202ENST00000537403 FGD1P98174 961 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 PHF12Q96QT6 1004 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 RCAN3Q9UKA8 241 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 KCNA6P17658 529 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 AMPHP49418 695 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 GOLGA2Q08379 1002 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 TRPC6Q9Y210 931 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 ZNF330Q9Y3S2 320 aaPredicted RBP5.17□□□□□ -1.58
SEC23A-202ENST00000537403 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
SEC23A-202ENST00000537403 ITSN1Q15811 1721 aa5.17□□□□□ -1.58
SEC23A-202ENST00000537403 APBB1O00213 710 aa5.16□□□□□ -1.58
SEC23A-202ENST00000537403 FAM212AQ96EL1 285 aa5.16□□□□□ -1.58
SEC23A-202ENST00000537403 PANK3Q9H999 370 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms