RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 MEX3CQ5U5Q3 659 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 SGIP1Q9BQI5 828 aa12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
CCDC90B-219ENST00000534753 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
CCDC90B-219ENST00000534753 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-219ENST00000534753 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
CCDC90B-219ENST00000534753 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
CCDC90B-219ENST00000534753 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
CCDC90B-219ENST00000534753 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
CCDC90B-219ENST00000534753 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
CCDC90B-219ENST00000534753 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-219ENST00000534753 LAMC1P11047 1609 aa12.91□□□□□ -0.34
CCDC90B-219ENST00000534753 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-219ENST00000534753 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-219ENST00000534753 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-219ENST00000534753 HIRIP3Q9BW71 556 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-219ENST00000534753 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
CCDC90B-219ENST00000534753 TECPR2O15040 1411 aa12.89□□□□□ -0.35
CCDC90B-219ENST00000534753 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
CCDC90B-219ENST00000534753 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
CCDC90B-219ENST00000534753 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-219ENST00000534753 FOXO3O43524 673 aa12.88□□□□□ -0.35
CCDC90B-219ENST00000534753 SPATA31A6Q5VVP1 1343 aa12.88□□□□□ -0.35
CCDC90B-219ENST00000534753 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 SOCS7O14512 581 aa12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 SIRT1Q96EB6 747 aa12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 NHSL1Q5SYE7 1610 aa12.87□□□□□ -0.35
CCDC90B-219ENST00000534753 PRKCSHP14314 528 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-219ENST00000534753 LRP6O75581 1613 aa12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 ZNF467Q7Z7K2 595 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 ADGRB1O14514 1584 aa12.85□□□□□ -0.35
CCDC90B-219ENST00000534753 SHPRHQ149N8 1683 aa12.84□□□□□ -0.35
CCDC90B-219ENST00000534753 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
CCDC90B-219ENST00000534753 NPHP3Q7Z494 1330 aa12.84□□□□□ -0.35
CCDC90B-219ENST00000534753 PNPLA6Q8IY17 1366 aa12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 FMN2Q9NZ56 1722 aa12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 SOS2Q07890 1332 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-219ENST00000534753 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
CCDC90B-219ENST00000534753 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
CCDC90B-219ENST00000534753 EVX2Q03828 476 aa12.81□□□□□ -0.36
CCDC90B-219ENST00000534753 PSME1Q06323 249 aa12.81□□□□□ -0.36
CCDC90B-219ENST00000534753 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-219ENST00000534753 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
CCDC90B-219ENST00000534753 RGPD8O14715 1765 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-219ENST00000534753 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
CCDC90B-219ENST00000534753 AFF2P51816 1311 aa12.8□□□□□ -0.36
CCDC90B-219ENST00000534753 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-219ENST00000534753 PSEN1P49768 467 aa12.79□□□□□ -0.36
CCDC90B-219ENST00000534753 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-219ENST00000534753 LHX8Q68G74 356 aa12.78□□□□□ -0.36
CCDC90B-219ENST00000534753 IFNL1Q8IU54 200 aa12.78□□□□□ -0.36
CCDC90B-219ENST00000534753 PXDNQ92626 1479 aa12.78□□□□□ -0.36
CCDC90B-219ENST00000534753 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
CCDC90B-219ENST00000534753 MAP3K13O43283 966 aa12.77□□□□□ -0.37
CCDC90B-219ENST00000534753 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-219ENST00000534753 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-219ENST00000534753 CDK19Q9BWU1 502 aa12.77□□□□□ -0.37
CCDC90B-219ENST00000534753 KIF1AQ12756 1690 aa12.77□□□□□ -0.37
CCDC90B-219ENST00000534753 PAK3O75914 559 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-219ENST00000534753 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
CCDC90B-219ENST00000534753 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
CCDC90B-219ENST00000534753 TONSLQ96HA7 1378 aa12.76□□□□□ -0.37
CCDC90B-219ENST00000534753 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
CCDC90B-219ENST00000534753 ROCK2O75116 1388 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 SPATA31A3Q5VYP0 1347 aa12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 USP32Q8NFA0 1604 aa12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 CABLES1Q8TDN4 633 aa12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
CCDC90B-219ENST00000534753 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
CCDC90B-219ENST00000534753 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
CCDC90B-219ENST00000534753 CENPJQ9HC77 1338 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-219ENST00000534753 RXRBP28702 533 aa12.74□□□□□ -0.37
CCDC90B-219ENST00000534753 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-219ENST00000534753 TULP4Q9NRJ4 1543 aa12.73□□□□□ -0.37
CCDC90B-219ENST00000534753 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
CCDC90B-219ENST00000534753 NBPF8Q3BBV2 869 aa12.73□□□□□ -0.37
CCDC90B-219ENST00000534753 USP21Q9UK80 565 aa12.73□□□□□ -0.37
CCDC90B-219ENST00000534753 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
CCDC90B-219ENST00000534753 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
CCDC90B-219ENST00000534753 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
CCDC90B-219ENST00000534753 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.37
CCDC90B-219ENST00000534753 PLSCR2Q9NRY7 297 aa12.71□□□□□ -0.37
CCDC90B-219ENST00000534753 TRPM1Q7Z4N2 1603 aa12.7□□□□□ -0.38
CCDC90B-219ENST00000534753 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-219ENST00000534753 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-219ENST00000534753 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
CCDC90B-219ENST00000534753 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
CCDC90B-219ENST00000534753 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms