RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 KIAA1210Q9ULL0 1709 aa8.87□□□□□ -0.99
ATPAF1-209ENST00000529214 ROCK2O75116 1388 aaKnown RBP8.87□□□□□ -0.99
ATPAF1-209ENST00000529214 KNDC1Q76NI1 1749 aa8.86□□□□□ -0.99
ATPAF1-209ENST00000529214 CARD11Q9BXL7 1154 aa8.86□□□□□ -0.99
ATPAF1-209ENST00000529214 GPRASP1Q5JY77 1395 aa8.86□□□□□ -0.99
ATPAF1-209ENST00000529214 MST1RQ04912 1400 aa8.86□□□□□ -0.99
ATPAF1-209ENST00000529214 PRR29P0C7W0 189 aa8.85□□□□□ -0.99
ATPAF1-209ENST00000529214 CD44P16070 742 aaKnown RBP8.85□□□□□ -0.99
ATPAF1-209ENST00000529214 HSPA1LP34931 641 aa8.85□□□□□ -0.99
ATPAF1-209ENST00000529214 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
ATPAF1-209ENST00000529214 TRPM1Q7Z4N2 1603 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 WASLO00401 505 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 ORAI2Q96SN7 254 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 CENPJQ9HC77 1338 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 C1orf167Q5SNV9 1468 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 NALCNQ8IZF0 1738 aa8.84□□□□□ -0.99
ATPAF1-209ENST00000529214 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
ATPAF1-209ENST00000529214 CDK19Q9BWU1 502 aa8.83□□□□□ -1
ATPAF1-209ENST00000529214 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
ATPAF1-209ENST00000529214 CDC42BPGQ6DT37 1551 aa8.81□□□□□ -1
ATPAF1-209ENST00000529214 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
ATPAF1-209ENST00000529214 ARHGEF28Q8N1W1 1705 aaKnown RBP8.8□□□□□ -1
ATPAF1-209ENST00000529214 ROBO1Q9Y6N7 1651 aa8.8□□□□□ -1
ATPAF1-209ENST00000529214 EIF3AQ14152 1382 aaKnown RBP8.8□□□□□ -1
ATPAF1-209ENST00000529214 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
ATPAF1-209ENST00000529214 ST20-MTHFSA0A0A6YYL1 179 aa8.8□□□□□ -1
ATPAF1-209ENST00000529214 FOXO3O43524 673 aa8.8□□□□□ -1
ATPAF1-209ENST00000529214 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
ATPAF1-209ENST00000529214 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
ATPAF1-209ENST00000529214 LRRC59Q96AG4 307 aaKnown RBP8.79□□□□□ -1
ATPAF1-209ENST00000529214 PHF8Q9UPP1 1060 aa8.79□□□□□ -1
ATPAF1-209ENST00000529214 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
ATPAF1-209ENST00000529214 ANKARQ7Z5J8 1434 aa8.79□□□□□ -1
ATPAF1-209ENST00000529214 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
ATPAF1-209ENST00000529214 EVC2Q86UK5 1308 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 SRPK2P78362 688 aaKnown RBP8.78□□□□□ -1
ATPAF1-209ENST00000529214 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 CABP2Q9NPB3 220 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 ADGRB2O60241 1585 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 SBNO2Q9Y2G9 1366 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 NPHP3Q7Z494 1330 aa8.78□□□□□ -1
ATPAF1-209ENST00000529214 KRT28Q7Z3Y7 464 aa8.77□□□□□ -1
ATPAF1-209ENST00000529214 UBE2Q2Q8WVN8 375 aa8.77□□□□□ -1
ATPAF1-209ENST00000529214 TESK2Q96S53 571 aa8.77□□□□□ -1
ATPAF1-209ENST00000529214 FMN2Q9NZ56 1722 aa8.77□□□□□ -1.01
ATPAF1-209ENST00000529214 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
ATPAF1-209ENST00000529214 POTEMA6NI47 508 aa8.77□□□□□ -1.01
ATPAF1-209ENST00000529214 PSME1Q06323 249 aa8.77□□□□□ -1.01
ATPAF1-209ENST00000529214 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
ATPAF1-209ENST00000529214 AHDC1Q5TGY3 1603 aaPredicted RBP8.76□□□□□ -1.01
ATPAF1-209ENST00000529214 USP47Q96K76 1375 aa8.76□□□□□ -1.01
ATPAF1-209ENST00000529214 TULP4Q9NRJ4 1543 aa8.76□□□□□ -1.01
ATPAF1-209ENST00000529214 PUS7Q96PZ0 661 aaKnown RBP8.76□□□□□ -1.01
ATPAF1-209ENST00000529214 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
ATPAF1-209ENST00000529214 JCADQ9P266 1359 aa8.75□□□□□ -1.01
ATPAF1-209ENST00000529214 USP32Q8NFA0 1604 aa8.75□□□□□ -1.01
ATPAF1-209ENST00000529214 XPCQ01831 940 aaPredicted RBP8.75□□□□□ -1.01
ATPAF1-209ENST00000529214 LMOD2Q6P5Q4 547 aa8.75□□□□□ -1.01
ATPAF1-209ENST00000529214 NGDNQ8NEJ9 315 aaKnown RBP8.75□□□□□ -1.01
ATPAF1-209ENST00000529214 ATP7BP35670 1465 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 ACEP12821 1306 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 PHLPP1O60346 1717 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 EIF4G2P78344 907 aaKnown RBP eCLIP8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 QRICH2Q9H0J4 1663 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 RGPD8O14715 1765 aaPredicted RBP8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 COL16A1Q07092 1604 aaPredicted RBP8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 NHSL1Q5SYE7 1610 aa8.74□□□□□ -1.01
ATPAF1-209ENST00000529214 SPATA31A3Q5VYP0 1347 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 TMF1P82094 1093 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 PCDH10Q9P2E7 1040 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 PXDNQ92626 1479 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 SPATA31A6Q5VVP1 1343 aa8.73□□□□□ -1.01
ATPAF1-209ENST00000529214 HSPA5P11021 654 aaKnown RBP8.72□□□□□ -1.01
ATPAF1-209ENST00000529214 SBNO1A3KN83 1393 aa8.72□□□□□ -1.01
ATPAF1-209ENST00000529214 POLR3AO14802 1390 aaPredicted RBP8.72□□□□□ -1.01
ATPAF1-209ENST00000529214 ATAD2Q6PL18 1390 aa8.72□□□□□ -1.01
ATPAF1-209ENST00000529214 PPIP5K1Q6PFW1 1433 aa8.72□□□□□ -1.01
ATPAF1-209ENST00000529214 POTEGQ6S5H5 508 aa8.71□□□□□ -1.01
ATPAF1-209ENST00000529214 SLC12A5Q9H2X9 1139 aa8.71□□□□□ -1.01
ATPAF1-209ENST00000529214 PNPLA6Q8IY17 1366 aa8.71□□□□□ -1.01
ATPAF1-209ENST00000529214 KIF1AQ12756 1690 aa8.71□□□□□ -1.01
ATPAF1-209ENST00000529214 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 CDCA8Q53HL2 280 aa8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 DISP3Q9P2K9 1392 aa8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 PAK3O75914 559 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 TMC1Q8TDI8 760 aa8.7□□□□□ -1.02
ATPAF1-209ENST00000529214 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms