RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ALKQ9UM73 1620 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 MIA2Q96PC5 1412 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 NLRP1Q9C000 1473 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 TSR1Q2NL82 804 aaKnown RBP6.18□□□□□ -1.42
NPM1-210ENST00000523339 FBXW7Q969H0 707 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 FAM198AQ9UFP1 575 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 ATP7AQ04656 1500 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 KIDINS220Q9ULH0 1771 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 SAMD9LQ8IVG5 1584 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 MSH6P52701 1360 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 TMEM94Q12767 1356 aa6.18□□□□□ -1.42
NPM1-210ENST00000523339 IQGAP1P46940 1657 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 ITSN2Q9NZM3 1697 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 MED14O60244 1454 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 SYCP2Q9BX26 1530 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 ONECUT3O60422 494 aaPredicted RBP6.17□□□□□ -1.42
NPM1-210ENST00000523339 ITGBL1O95965 494 aaPredicted RBP6.17□□□□□ -1.42
NPM1-210ENST00000523339 EPAS1Q99814 870 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 SLAIN2Q9P270 581 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 TSKSQ9UJT2 592 aa6.17□□□□□ -1.42
NPM1-210ENST00000523339 PZPP20742 1482 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 LRRC9Q6ZRR7 1453 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 PLEKHH2Q8IVE3 1493 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 TRIM6-TRIM34B2RNG4 842 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 RGS20O76081 388 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 LAPTM4BQ86VI4 370 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 ANKK1Q8NFD2 765 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 NGLY1Q96IV0 654 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 ATAD2Q6PL18 1390 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 CCNB3Q8WWL7 1395 aa6.16□□□□□ -1.42
NPM1-210ENST00000523339 KDM5DQ9BY66 1539 aa6.15□□□□□ -1.42
NPM1-210ENST00000523339 PREX2Q70Z35 1606 aa6.15□□□□□ -1.42
NPM1-210ENST00000523339 SMAPO00193 183 aa6.15□□□□□ -1.42
NPM1-210ENST00000523339 C8orf37Q96NL8 207 aa6.15□□□□□ -1.42
NPM1-210ENST00000523339 IRX2Q9BZI1 471 aaPredicted RBP6.15□□□□□ -1.42
NPM1-210ENST00000523339 AFF2P51816 1311 aa6.15□□□□□ -1.43
NPM1-210ENST00000523339 CCDC18Q5T9S5 1454 aa6.15□□□□□ -1.43
NPM1-210ENST00000523339 SCAF11Q99590 1463 aaKnown RBP6.15□□□□□ -1.43
NPM1-210ENST00000523339 DEPDC5O75140 1603 aa6.14□□□□□ -1.43
NPM1-210ENST00000523339 RBM6P78332 1123 aaKnown RBP6.14□□□□□ -1.43
NPM1-210ENST00000523339 SLC26A8Q96RN1 970 aa6.14□□□□□ -1.43
NPM1-210ENST00000523339 QTRT2Q9H974 415 aaKnown RBP6.14□□□□□ -1.43
NPM1-210ENST00000523339 DHX29Q7Z478 1369 aaKnown RBP6.14□□□□□ -1.43
NPM1-210ENST00000523339 ROBO1Q9Y6N7 1651 aa6.14□□□□□ -1.43
NPM1-210ENST00000523339 CDC42BPBQ9Y5S2 1711 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 KCNA6P17658 529 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 ATF3P18847 181 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 SF3B2Q13435 895 aaKnown RBP6.13□□□□□ -1.43
NPM1-210ENST00000523339 EEA1Q15075 1411 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 KIAA1107Q9UPP5 1409 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 PLXNC1O60486 1568 aa6.13□□□□□ -1.43
NPM1-210ENST00000523339 LCE2BO14633 110 aa6.12□□□□□ -1.43
NPM1-210ENST00000523339 PPP1R15AO75807 674 aaPredicted RBP6.12□□□□□ -1.43
NPM1-210ENST00000523339 TSPY4P0CV99 314 aa6.12□□□□□ -1.43
NPM1-210ENST00000523339 TSPY10P0CW01 314 aa6.12□□□□□ -1.43
NPM1-210ENST00000523339 LTKP29376 864 aa6.12□□□□□ -1.43
NPM1-210ENST00000523339 BBXQ8WY36 941 aaPredicted RBP6.12□□□□□ -1.43
NPM1-210ENST00000523339 CDK12Q9NYV4 1490 aaPredicted RBP6.12□□□□□ -1.43
NPM1-210ENST00000523339 HPS5Q9UPZ3 1129 aa6.12□□□□□ -1.43
NPM1-210ENST00000523339 PHLPP1O60346 1717 aa6.11□□□□□ -1.43
NPM1-210ENST00000523339 EN1Q05925 392 aaPredicted RBP6.11□□□□□ -1.43
NPM1-210ENST00000523339 FAM98CQ17RN3 349 aaKnown RBP6.11□□□□□ -1.43
NPM1-210ENST00000523339 LRP6O75581 1613 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 GPATCH8Q9UKJ3 1502 aaKnown RBP6.1□□□□□ -1.43
NPM1-210ENST00000523339 RGS12O14924 1447 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 FGD6Q6ZV73 1430 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 ZNF644Q9H582 1327 aaPredicted RBP6.1□□□□□ -1.43
NPM1-210ENST00000523339 ADAMTS2O95450 1211 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 KCNC4Q03721 635 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 NBR1Q14596 966 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 PDIA6Q15084 440 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 CCDC125Q86Z20 511 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 ADGBQ8N7X0 1667 aa6.1□□□□□ -1.43
NPM1-210ENST00000523339 INO80Q9ULG1 1556 aaPredicted RBP6.1□□□□□ -1.43
NPM1-210ENST00000523339 MTUS2Q5JR59 1369 aa6.09□□□□□ -1.43
NPM1-210ENST00000523339 STRCP1A6NGW2 1772 aa6.09□□□□□ -1.43
NPM1-210ENST00000523339 YY1P25490 414 aa6.09□□□□□ -1.43
NPM1-210ENST00000523339 TJAP1Q5JTD0 557 aa6.09□□□□□ -1.43
NPM1-210ENST00000523339 CDCA7LQ96GN5 454 aa6.09□□□□□ -1.43
NPM1-210ENST00000523339 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.09□□□□□ -1.43
NPM1-210ENST00000523339 TSR3Q9UJK0 312 aaKnown RBP6.09□□□□□ -1.43
NPM1-210ENST00000523339 ARHGAP35Q9NRY4 1499 aa6.09□□□□□ -1.44
NPM1-210ENST00000523339 RTEL1-TNFRSF6BF6WH68 1400 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 GRXCR2A6NFK2 248 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 MAP3K7O43318 606 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 OSBPP22059 807 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 SAMD7Q7Z3H4 446 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 USP21Q9UK80 565 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 SETBP1Q9Y6X0 1596 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 CASKIN1Q8WXD9 1431 aa6.08□□□□□ -1.44
NPM1-210ENST00000523339 HDGFP51858 240 aaKnown RBP6.07□□□□□ -1.44
NPM1-210ENST00000523339 PRSS12P56730 875 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 RSPH4AQ5TD94 716 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 PACS2Q86VP3 889 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 ZNF516Q92618 1163 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 LRRC59Q96AG4 307 aaKnown RBP6.07□□□□□ -1.44
NPM1-210ENST00000523339 LRCH3Q96II8 777 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 CDHR5Q9HBB8 845 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 TRPC5Q9UL62 973 aaPredicted RBP6.07□□□□□ -1.44
NPM1-210ENST00000523339 PRDM15P57071 1507 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms