RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 RTL5Q5HYW3 569 aaPredicted RBP6.76□□□□□ -1.33
CLINT1-202ENST00000518855 ARXQ96QS3 562 aa6.76□□□□□ -1.33
CLINT1-202ENST00000518855 NKTRP30414 1462 aaKnown RBP6.76□□□□□ -1.33
CLINT1-202ENST00000518855 PCDH10Q9P2E7 1040 aa6.76□□□□□ -1.33
CLINT1-202ENST00000518855 MROH2AA6NES4 1674 aa6.76□□□□□ -1.33
CLINT1-202ENST00000518855 EMP3P54852 163 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 FAM205CA6NFA0 338 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 PIK3C2BO00750 1634 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 PPP1R37O75864 691 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 NLRP6P59044 892 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 PLCH2O75038 1416 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 ADGRB3O60242 1522 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 ARHGAP5Q13017 1502 aa6.75□□□□□ -1.33
CLINT1-202ENST00000518855 FANCAO15360 1455 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 EFCAB6Q5THR3 1501 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 DUSP27Q5VZP5 1158 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 PLEKHH1Q9ULM0 1364 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 CLTCQ00610 1675 aaKnown RBP6.74□□□□□ -1.33
CLINT1-202ENST00000518855 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 PKNOX2Q96KN3 472 aa6.74□□□□□ -1.33
CLINT1-202ENST00000518855 QRICH2Q9H0J4 1663 aa6.73□□□□□ -1.33
CLINT1-202ENST00000518855 HS3ST6Q96QI5 342 aa6.73□□□□□ -1.33
CLINT1-202ENST00000518855 ERVK-7P63135 1459 aa6.73□□□□□ -1.33
CLINT1-202ENST00000518855 AMER1Q5JTC6 1135 aaPredicted RBP6.73□□□□□ -1.33
CLINT1-202ENST00000518855 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
CLINT1-202ENST00000518855 POLR3AO14802 1390 aaPredicted RBP6.72□□□□□ -1.33
CLINT1-202ENST00000518855 PLEKHD1A6NEE1 506 aa6.72□□□□□ -1.33
CLINT1-202ENST00000518855 CDC42BPGQ6DT37 1551 aa6.72□□□□□ -1.33
CLINT1-202ENST00000518855 JPH4Q96JJ6 628 aa6.72□□□□□ -1.33
CLINT1-202ENST00000518855 TAOK2Q9UL54 1235 aa6.72□□□□□ -1.33
CLINT1-202ENST00000518855 TSPY4P0CV99 314 aa6.71□□□□□ -1.33
CLINT1-202ENST00000518855 TSPY10P0CW01 314 aa6.71□□□□□ -1.33
CLINT1-202ENST00000518855 ARHGEF28Q8N1W1 1705 aaKnown RBP6.71□□□□□ -1.33
CLINT1-202ENST00000518855 ADGRB1O14514 1584 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 TMF1P82094 1093 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 ZNF518AQ6AHZ1 1483 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 ZNF710Q8N1W2 664 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 CRBNQ96SW2 442 aa6.71□□□□□ -1.34
CLINT1-202ENST00000518855 USP19O94966 1318 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 ATP7AQ04656 1500 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 NBR1Q14596 966 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 CFAP74Q9C0B2 1584 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 NEFMP07197 916 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 PDE3AQ14432 1141 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 ARHGAP31Q2M1Z3 1444 aa6.7□□□□□ -1.34
CLINT1-202ENST00000518855 KHSRPQ92945 711 aaKnown RBP eCLIP6.69□□□□□ -1.34
CLINT1-202ENST00000518855 FRMPD1Q5SYB0 1578 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 C2orf72A6NCS6 295 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 CHGAP10645 457 aaKnown RBP6.69□□□□□ -1.34
CLINT1-202ENST00000518855 PPP2R1AP30153 589 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 NFKBIBQ15653 356 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
CLINT1-202ENST00000518855 KIDINS220Q9ULH0 1771 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 HECW2Q9P2P5 1572 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 MED14O60244 1454 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 HOXB1P14653 301 aaPredicted RBP6.69□□□□□ -1.34
CLINT1-202ENST00000518855 FAM43AQ8N2R8 423 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 CDCA7LQ96GN5 454 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 NCOA3Q9Y6Q9 1424 aa6.69□□□□□ -1.34
CLINT1-202ENST00000518855 NKX1-1Q15270 411 aaPredicted RBP6.68□□□□□ -1.34
CLINT1-202ENST00000518855 PUS7Q96PZ0 661 aaKnown RBP6.68□□□□□ -1.34
CLINT1-202ENST00000518855 YEATS2Q9ULM3 1422 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 MAPK8IP3Q9UPT6 1336 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 GPR153Q6NV75 609 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 KIF3CO14782 793 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 DOK7Q18PE1 504 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 PANK3Q9H999 370 aa6.68□□□□□ -1.34
CLINT1-202ENST00000518855 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
CLINT1-202ENST00000518855 NBPF1Q3BBV0 1214 aa6.67□□□□□ -1.34
CLINT1-202ENST00000518855 CCDC27Q2M243 656 aa6.67□□□□□ -1.34
CLINT1-202ENST00000518855 HS6ST3Q8IZP7 471 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 CAMSAP1Q5T5Y3 1602 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 E9PSI1 815 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 TULP1O00294 542 aaPredicted RBP6.66□□□□□ -1.34
CLINT1-202ENST00000518855 ARSIQ5FYB1 569 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 SPNS2Q8IVW8 549 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 ADAMTS8Q9UP79 889 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 NSD2O96028 1365 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 PDIA4P13667 645 aaKnown RBP6.66□□□□□ -1.34
CLINT1-202ENST00000518855 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 KIF20BQ96Q89 1820 aa6.66□□□□□ -1.34
CLINT1-202ENST00000518855 COL3A1P02461 1466 aaPredicted RBP6.66□□□□□ -1.34
CLINT1-202ENST00000518855 UGGT1Q9NYU2 1555 aa6.65□□□□□ -1.34
CLINT1-202ENST00000518855 VARS2Q5ST30 1063 aaKnown RBP6.65□□□□□ -1.35
CLINT1-202ENST00000518855 ABCC3O15438 1527 aa6.65□□□□□ -1.35
CLINT1-202ENST00000518855 C20orf194Q5TEA3 1177 aa6.65□□□□□ -1.35
CLINT1-202ENST00000518855 CHMP7Q8WUX9 453 aaPredicted RBP6.65□□□□□ -1.35
CLINT1-202ENST00000518855 GLI2P10070 1586 aa6.64□□□□□ -1.35
CLINT1-202ENST00000518855 ERBB3P21860 1342 aa6.64□□□□□ -1.35
CLINT1-202ENST00000518855 HNRNPMP52272 730 aaKnown RBP eCLIP6.64□□□□□ -1.35
CLINT1-202ENST00000518855 ERCC6L2Q5T890 1561 aa6.64□□□□□ -1.35
CLINT1-202ENST00000518855 TRAPPC8Q9Y2L5 1435 aa6.64□□□□□ -1.35
CLINT1-202ENST00000518855 CT47B1P0C2W7 299 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms