RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 RIMBP3Q9UFD9 1639 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 TNNQ9UQP3 1299 aa8.52□□□□□ -1.05
CDH12-203ENST00000517378 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
CDH12-203ENST00000517378 ATP7BP35670 1465 aa8.51□□□□□ -1.05
CDH12-203ENST00000517378 HDAC1Q13547 482 aaPredicted RBP8.51□□□□□ -1.05
CDH12-203ENST00000517378 BECN1Q14457 450 aa8.51□□□□□ -1.05
CDH12-203ENST00000517378 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
CDH12-203ENST00000517378 TMPOP42166 694 aaKnown RBP8.51□□□□□ -1.05
CDH12-203ENST00000517378 TRIM35Q9UPQ4 493 aa8.51□□□□□ -1.05
CDH12-203ENST00000517378 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
CDH12-203ENST00000517378 FAM135BQ49AJ0 1406 aa8.5□□□□□ -1.05
CDH12-203ENST00000517378 FRAT2O75474 233 aaPredicted RBP8.5□□□□□ -1.05
CDH12-203ENST00000517378 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
CDH12-203ENST00000517378 ANTXR1Q9H6X2 564 aa8.5□□□□□ -1.05
CDH12-203ENST00000517378 TERF2IPQ9NYB0 399 aa8.5□□□□□ -1.05
CDH12-203ENST00000517378 FYB1O15117 783 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 AGLP35573 1532 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 RAPGEF3O95398 923 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 OSCARQ8IYS5 282 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 UPF2Q9HAU5 1272 aaKnown RBP8.49□□□□□ -1.05
CDH12-203ENST00000517378 SPATA31D1Q6ZQQ2 1576 aa8.49□□□□□ -1.05
CDH12-203ENST00000517378 TRIM27P14373 513 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 DDX19BQ9UMR2 479 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 KIF16BQ96L93 1317 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 BRPF1P55201 1214 aaPredicted RBP8.48□□□□□ -1.05
CDH12-203ENST00000517378 FTSJ3Q8IY81 847 aaKnown RBP8.48□□□□□ -1.05
CDH12-203ENST00000517378 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
CDH12-203ENST00000517378 KNDC1Q76NI1 1749 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 KCNA4P22459 653 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 SRPK2P78362 688 aaKnown RBP8.48□□□□□ -1.05
CDH12-203ENST00000517378 ATF7IPQ6VMQ6 1270 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 SMC5Q8IY18 1101 aa8.48□□□□□ -1.05
CDH12-203ENST00000517378 TSR2Q969E8 191 aaKnown RBP8.48□□□□□ -1.05
CDH12-203ENST00000517378 MON2Q7Z3U7 1717 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 EXOSC9Q06265 439 aaKnown RBP8.47□□□□□ -1.05
CDH12-203ENST00000517378 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
CDH12-203ENST00000517378 SSH1Q8WYL5 1049 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 SMC4Q9NTJ3 1288 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 ZNF428Q96B54 188 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 PRAM1Q96QH2 718 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 PIK3R4Q99570 1358 aa8.47□□□□□ -1.05
CDH12-203ENST00000517378 MAP2P11137 1827 aaKnown RBP8.46□□□□□ -1.05
CDH12-203ENST00000517378 CDK12Q9NYV4 1490 aaPredicted RBP8.46□□□□□ -1.05
CDH12-203ENST00000517378 PTCH1Q13635 1447 aa8.46□□□□□ -1.06
CDH12-203ENST00000517378 DIAPH1O60610 1272 aaKnown RBP8.46□□□□□ -1.06
CDH12-203ENST00000517378 FCHSD2O94868 740 aa8.46□□□□□ -1.06
CDH12-203ENST00000517378 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.06
CDH12-203ENST00000517378 ZBTB40Q9NUA8 1239 aa8.46□□□□□ -1.06
CDH12-203ENST00000517378 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
CDH12-203ENST00000517378 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
CDH12-203ENST00000517378 HDGFL2Q7Z4V5 671 aaPredicted RBP8.45□□□□□ -1.06
CDH12-203ENST00000517378 CPSF1Q10570 1443 aaKnown RBP8.45□□□□□ -1.06
CDH12-203ENST00000517378 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
CDH12-203ENST00000517378 NRKQ7Z2Y5 1582 aa8.45□□□□□ -1.06
CDH12-203ENST00000517378 NCOA3Q9Y6Q9 1424 aa8.45□□□□□ -1.06
CDH12-203ENST00000517378 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
CDH12-203ENST00000517378 IPO8O15397 1037 aaKnown RBP8.44□□□□□ -1.06
CDH12-203ENST00000517378 SAFB2Q14151 953 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDH12-203ENST00000517378 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 BRPF3Q9ULD4 1205 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 NOB1Q9ULX3 412 aaKnown RBP8.44□□□□□ -1.06
CDH12-203ENST00000517378 PPP6R1Q9UPN7 881 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 DLG5Q8TDM6 1919 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 C3P01024 1663 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 RIPK4P57078 832 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
CDH12-203ENST00000517378 STK26Q9P289 416 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 DIP2BQ9P265 1576 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 ITPRIPQ8IWB1 547 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 TMEM57Q8N5G2 664 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 CDK19Q9BWU1 502 aa8.44□□□□□ -1.06
CDH12-203ENST00000517378 POGKQ9P215 609 aa8.43□□□□□ -1.06
CDH12-203ENST00000517378 ITSN1Q15811 1721 aa8.43□□□□□ -1.06
CDH12-203ENST00000517378 CPS1P31327 1500 aa8.43□□□□□ -1.06
CDH12-203ENST00000517378 NUCB1Q02818 461 aa8.43□□□□□ -1.06
CDH12-203ENST00000517378 ARHGAP45Q92619 1136 aa8.43□□□□□ -1.06
CDH12-203ENST00000517378 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
CDH12-203ENST00000517378 TECPR2O15040 1411 aa8.42□□□□□ -1.06
CDH12-203ENST00000517378 RBM25P49756 843 aaKnown RBP8.42□□□□□ -1.06
CDH12-203ENST00000517378 SLKQ9H2G2 1235 aaPredicted RBP8.42□□□□□ -1.06
CDH12-203ENST00000517378 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
CDH12-203ENST00000517378 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
CDH12-203ENST00000517378 RIMS2Q9UQ26 1411 aa8.42□□□□□ -1.06
CDH12-203ENST00000517378 CALD1Q05682 793 aaKnown RBP8.41□□□□□ -1.06
CDH12-203ENST00000517378 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
CDH12-203ENST00000517378 CHMP4BQ9H444 224 aaKnown RBP8.41□□□□□ -1.06
CDH12-203ENST00000517378 TOPAZ1Q8N9V7 1692 aa8.41□□□□□ -1.06
CDH12-203ENST00000517378 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 PRKAR2BP31323 418 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 DDIT3P35638 169 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 IFT57Q9NWB7 429 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 ABCC4O15439 1325 aa8.4□□□□□ -1.06
CDH12-203ENST00000517378 KIF24Q5T7B8 1368 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms