RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 ATAD2Q6PL18 1390 aa14.12□□□□□ -0.15
RN7SKP52-201ENST00000516219 TIE1P35590 1138 aa14.12□□□□□ -0.15
RN7SKP52-201ENST00000516219 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
RN7SKP52-201ENST00000516219 FMN2Q9NZ56 1722 aa14.12□□□□□ -0.15
RN7SKP52-201ENST00000516219 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
RN7SKP52-201ENST00000516219 KNDC1Q76NI1 1749 aa14.11□□□□□ -0.15
RN7SKP52-201ENST00000516219 PRAG1Q86YV5 1406 aa14.11□□□□□ -0.15
RN7SKP52-201ENST00000516219 KIF12Q96FN5 646 aa14.11□□□□□ -0.15
RN7SKP52-201ENST00000516219 COLQQ9Y215 455 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP52-201ENST00000516219 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
RN7SKP52-201ENST00000516219 USP21Q9UK80 565 aa14.1□□□□□ -0.15
RN7SKP52-201ENST00000516219 CCDC61Q9Y6R9 512 aa14.1□□□□□ -0.15
RN7SKP52-201ENST00000516219 USP32Q8NFA0 1604 aa14.09□□□□□ -0.15
RN7SKP52-201ENST00000516219 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
RN7SKP52-201ENST00000516219 FNBP4Q8N3X1 1017 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP52-201ENST00000516219 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP52-201ENST00000516219 KIF1AQ12756 1690 aa14.05□□□□□ -0.16
RN7SKP52-201ENST00000516219 XPCQ01831 940 aaPredicted RBP14.05□□□□□ -0.16
RN7SKP52-201ENST00000516219 TRPC5Q9UL62 973 aaPredicted RBP14.05□□□□□ -0.16
RN7SKP52-201ENST00000516219 LRP5O75197 1615 aa14.04□□□□□ -0.16
RN7SKP52-201ENST00000516219 NRAPQ86VF7 1730 aa14.04□□□□□ -0.16
RN7SKP52-201ENST00000516219 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
RN7SKP52-201ENST00000516219 TRPC6Q9Y210 931 aa14.04□□□□□ -0.16
RN7SKP52-201ENST00000516219 NAIPQ13075 1403 aa14.04□□□□□ -0.16
RN7SKP52-201ENST00000516219 HFM1A2PYH4 1435 aa14.03□□□□□ -0.16
RN7SKP52-201ENST00000516219 RALGAPBQ86X10 1494 aa14.03□□□□□ -0.16
RN7SKP52-201ENST00000516219 SLIT2O94813 1529 aa14.02□□□□□ -0.16
RN7SKP52-201ENST00000516219 IER5LQ5T953 404 aa14.02□□□□□ -0.17
RN7SKP52-201ENST00000516219 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
RN7SKP52-201ENST00000516219 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
RN7SKP52-201ENST00000516219 CRYBG1Q9Y4K1 1723 aa14□□□□□ -0.17
RN7SKP52-201ENST00000516219 TNS1Q9HBL0 1735 aaKnown RBP13.99□□□□□ -0.17
RN7SKP52-201ENST00000516219 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
RN7SKP52-201ENST00000516219 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
RN7SKP52-201ENST00000516219 TRPM3Q9HCF6 1732 aaPredicted RBP13.98□□□□□ -0.17
RN7SKP52-201ENST00000516219 FOXO3O43524 673 aa13.98□□□□□ -0.17
RN7SKP52-201ENST00000516219 ESCO1Q5FWF5 840 aa13.98□□□□□ -0.17
RN7SKP52-201ENST00000516219 TECPR2O15040 1411 aa13.98□□□□□ -0.17
RN7SKP52-201ENST00000516219 NPHP3Q7Z494 1330 aa13.97□□□□□ -0.17
RN7SKP52-201ENST00000516219 MAP3K13O43283 966 aa13.97□□□□□ -0.17
RN7SKP52-201ENST00000516219 DEFB132Q7Z7B7 95 aa13.97□□□□□ -0.17
RN7SKP52-201ENST00000516219 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP52-201ENST00000516219 BLMP54132 1417 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP52-201ENST00000516219 RGPD1P0DJD0 1748 aa13.96□□□□□ -0.17
RN7SKP52-201ENST00000516219 SNPHO15079 494 aa13.96□□□□□ -0.17
RN7SKP52-201ENST00000516219 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.18
RN7SKP52-201ENST00000516219 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
RN7SKP52-201ENST00000516219 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
RN7SKP52-201ENST00000516219 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
RN7SKP52-201ENST00000516219 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
RN7SKP52-201ENST00000516219 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
RN7SKP52-201ENST00000516219 SPATA31A3Q5VYP0 1347 aa13.92□□□□□ -0.18
RN7SKP52-201ENST00000516219 SPATA31E1Q6ZUB1 1445 aa13.92□□□□□ -0.18
RN7SKP52-201ENST00000516219 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
RN7SKP52-201ENST00000516219 STK26Q9P289 416 aa13.92□□□□□ -0.18
RN7SKP52-201ENST00000516219 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
RN7SKP52-201ENST00000516219 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
RN7SKP52-201ENST00000516219 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
RN7SKP52-201ENST00000516219 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
RN7SKP52-201ENST00000516219 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
RN7SKP52-201ENST00000516219 RPGRIP1LQ68CZ1 1315 aa13.9□□□□□ -0.18
RN7SKP52-201ENST00000516219 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
RN7SKP52-201ENST00000516219 TMEM132EQ6IEE7 984 aa13.9□□□□□ -0.18
RN7SKP52-201ENST00000516219 CCDC125Q86Z20 511 aa13.9□□□□□ -0.18
RN7SKP52-201ENST00000516219 THSD7AQ9UPZ6 1657 aa13.9□□□□□ -0.18
RN7SKP52-201ENST00000516219 COL14A1Q05707 1796 aaKnown RBP13.89□□□□□ -0.19
RN7SKP52-201ENST00000516219 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
RN7SKP52-201ENST00000516219 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
RN7SKP52-201ENST00000516219 NRXN1Q9ULB1 1477 aa13.88□□□□□ -0.19
RN7SKP52-201ENST00000516219 PSDA5PKW4 1024 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP52-201ENST00000516219 SEPT12Q8IYM1 358 aa13.88□□□□□ -0.19
RN7SKP52-201ENST00000516219 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
RN7SKP52-201ENST00000516219 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
RN7SKP52-201ENST00000516219 RREB1Q92766 1687 aa13.87□□□□□ -0.19
RN7SKP52-201ENST00000516219 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
RN7SKP52-201ENST00000516219 PLCG2P16885 1265 aa13.86□□□□□ -0.19
RN7SKP52-201ENST00000516219 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
RN7SKP52-201ENST00000516219 NUP188Q5SRE5 1749 aa13.86□□□□□ -0.19
RN7SKP52-201ENST00000516219 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
RN7SKP52-201ENST00000516219 VPS72Q15906 364 aa13.84□□□□□ -0.19
RN7SKP52-201ENST00000516219 FAM182BQ5T319 152 aa13.83□□□□□ -0.2
RN7SKP52-201ENST00000516219 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 ADGRB1O14514 1584 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 HRCP23327 699 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 KRT27Q7Z3Y8 459 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 ANKRD30BQ9BXX2 1392 aa13.81□□□□□ -0.2
RN7SKP52-201ENST00000516219 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
RN7SKP52-201ENST00000516219 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
RN7SKP52-201ENST00000516219 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
RN7SKP52-201ENST00000516219 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
RN7SKP52-201ENST00000516219 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
RN7SKP52-201ENST00000516219 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
RN7SKP52-201ENST00000516219 SF3B2Q13435 895 aaKnown RBP13.78□□□□□ -0.2
RN7SKP52-201ENST00000516219 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
RN7SKP52-201ENST00000516219 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms