RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 PRDM4Q9UKN5 801 aa17.6■□□□□ 0.41
SDHA-203ENST00000503674 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
SDHA-203ENST00000503674 C22orf23Q9BZE7 217 aa17.59■□□□□ 0.41
SDHA-203ENST00000503674 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
SDHA-203ENST00000503674 DDIT3P35638 169 aa17.59■□□□□ 0.41
SDHA-203ENST00000503674 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
SDHA-203ENST00000503674 AAMPQ13685 434 aa17.58■□□□□ 0.4
SDHA-203ENST00000503674 NCOA3Q9Y6Q9 1424 aa17.58■□□□□ 0.4
SDHA-203ENST00000503674 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
SDHA-203ENST00000503674 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
SDHA-203ENST00000503674 ARHGEF28Q8N1W1 1705 aaKnown RBP17.57■□□□□ 0.4
SDHA-203ENST00000503674 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
SDHA-203ENST00000503674 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
SDHA-203ENST00000503674 IDI1Q13907 227 aa17.56■□□□□ 0.4
SDHA-203ENST00000503674 OFD1O75665 1012 aa17.54■□□□□ 0.4
SDHA-203ENST00000503674 RLBP1P12271 317 aa17.54■□□□□ 0.4
SDHA-203ENST00000503674 RIPK4P57078 832 aa17.54■□□□□ 0.4
SDHA-203ENST00000503674 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
SDHA-203ENST00000503674 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
SDHA-203ENST00000503674 HSCBQ8IWL3 235 aa17.53■□□□□ 0.4
SDHA-203ENST00000503674 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
SDHA-203ENST00000503674 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
SDHA-203ENST00000503674 ZSCAN30Q86W11 494 aa17.52■□□□□ 0.4
SDHA-203ENST00000503674 CCDC173Q0VFZ6 552 aa17.52■□□□□ 0.4
SDHA-203ENST00000503674 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.4
SDHA-203ENST00000503674 RWDD1Q9H446 243 aaPredicted RBP17.52■□□□□ 0.4
SDHA-203ENST00000503674 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
SDHA-203ENST00000503674 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
SDHA-203ENST00000503674 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
SDHA-203ENST00000503674 TERF1P54274 439 aa17.51■□□□□ 0.39
SDHA-203ENST00000503674 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
SDHA-203ENST00000503674 RBM10P98175 930 aaKnown RBP17.49■□□□□ 0.39
SDHA-203ENST00000503674 SKOR2Q2VWA4 1001 aaPredicted RBP17.49■□□□□ 0.39
SDHA-203ENST00000503674 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
SDHA-203ENST00000503674 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SDHA-203ENST00000503674 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
SDHA-203ENST00000503674 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.48■□□□□ 0.39
SDHA-203ENST00000503674 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
SDHA-203ENST00000503674 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
SDHA-203ENST00000503674 NASPP49321 788 aaPredicted RBP17.47■□□□□ 0.39
SDHA-203ENST00000503674 SNX21Q969T3 373 aa17.47■□□□□ 0.39
SDHA-203ENST00000503674 TMEM132EQ6IEE7 984 aa17.46■□□□□ 0.39
SDHA-203ENST00000503674 MAP7D2Q96T17 732 aa17.46■□□□□ 0.39
SDHA-203ENST00000503674 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
SDHA-203ENST00000503674 USP32Q8NFA0 1604 aa17.45■□□□□ 0.38
SDHA-203ENST00000503674 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
SDHA-203ENST00000503674 PTMSP20962 102 aa17.44■□□□□ 0.38
SDHA-203ENST00000503674 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
SDHA-203ENST00000503674 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
SDHA-203ENST00000503674 FAM13BQ9NYF5 915 aa17.43■□□□□ 0.38
SDHA-203ENST00000503674 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
SDHA-203ENST00000503674 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
SDHA-203ENST00000503674 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
SDHA-203ENST00000503674 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
SDHA-203ENST00000503674 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
SDHA-203ENST00000503674 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
SDHA-203ENST00000503674 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
SDHA-203ENST00000503674 R3HCC1Q9Y3T6 440 aaKnown RBP17.41■□□□□ 0.38
SDHA-203ENST00000503674 SETD1AO15047 1707 aaKnown RBP17.4■□□□□ 0.38
SDHA-203ENST00000503674 ANP32BQ92688 251 aaKnown RBP17.4■□□□□ 0.38
SDHA-203ENST00000503674 PTPRMP28827 1452 aa17.39■□□□□ 0.37
SDHA-203ENST00000503674 MLECQ14165 292 aa17.39■□□□□ 0.37
SDHA-203ENST00000503674 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
SDHA-203ENST00000503674 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
SDHA-203ENST00000503674 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
SDHA-203ENST00000503674 HS1BP3Q53T59 392 aa17.39■□□□□ 0.37
SDHA-203ENST00000503674 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
SDHA-203ENST00000503674 SMAP1Q8IYB5 467 aaPredicted RBP17.38■□□□□ 0.37
SDHA-203ENST00000503674 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
SDHA-203ENST00000503674 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
SDHA-203ENST00000503674 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
SDHA-203ENST00000503674 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
SDHA-203ENST00000503674 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
SDHA-203ENST00000503674 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.37■□□□□ 0.37
SDHA-203ENST00000503674 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
SDHA-203ENST00000503674 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
SDHA-203ENST00000503674 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
SDHA-203ENST00000503674 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
SDHA-203ENST00000503674 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
SDHA-203ENST00000503674 UQCRHLA0A096LP55 91 aa17.36■□□□□ 0.37
SDHA-203ENST00000503674 UQCRHP07919 91 aa17.36■□□□□ 0.37
SDHA-203ENST00000503674 CLEC17AQ6ZS10 378 aa17.36■□□□□ 0.37
SDHA-203ENST00000503674 KIF2CQ99661 725 aa17.36■□□□□ 0.37
SDHA-203ENST00000503674 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
SDHA-203ENST00000503674 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
SDHA-203ENST00000503674 RIMS2Q9UQ26 1411 aa17.35■□□□□ 0.37
SDHA-203ENST00000503674 SSFA2P28290 1259 aa17.35■□□□□ 0.37
SDHA-203ENST00000503674 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
SDHA-203ENST00000503674 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
SDHA-203ENST00000503674 MTERF4Q7Z6M4 381 aaKnown RBP17.34■□□□□ 0.37
SDHA-203ENST00000503674 ZNF445P59923 1031 aa17.33■□□□□ 0.37
SDHA-203ENST00000503674 XPCQ01831 940 aaPredicted RBP17.33■□□□□ 0.37
SDHA-203ENST00000503674 PDLIM2Q96JY6 352 aa17.33■□□□□ 0.37
SDHA-203ENST00000503674 ESF1Q9H501 851 aaKnown RBP17.33■□□□□ 0.37
SDHA-203ENST00000503674 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.37
SDHA-203ENST00000503674 ZKSCAN2Q63HK3 967 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 DZIP1LQ8IYY4 767 aaKnown RBP17.33■□□□□ 0.36
SDHA-203ENST00000503674 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 RUNDC1Q96C34 613 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms