RNA–Protein interactions for RNA: ENST00000503337.1

ABCC3-205, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 1 (best)

Gene ABCC3, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-205ENST00000503337 ALKQ9UM73 1620 aa17.82■□□□□ 0.44
ABCC3-205ENST00000503337 ADAMTSL3P82987 1691 aa17.82■□□□□ 0.44
ABCC3-205ENST00000503337 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
ABCC3-205ENST00000503337 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
ABCC3-205ENST00000503337 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
ABCC3-205ENST00000503337 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
ABCC3-205ENST00000503337 PANK1Q8TE04 598 aa17.8■□□□□ 0.44
ABCC3-205ENST00000503337 PRAM1Q96QH2 718 aa17.8■□□□□ 0.44
ABCC3-205ENST00000503337 PNNQ9H307 717 aaKnown RBP17.8■□□□□ 0.44
ABCC3-205ENST00000503337 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
ABCC3-205ENST00000503337 COL3A1P02461 1466 aaPredicted RBP17.8■□□□□ 0.44
ABCC3-205ENST00000503337 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
ABCC3-205ENST00000503337 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
ABCC3-205ENST00000503337 MINK1Q8N4C8 1332 aaPredicted RBP17.79■□□□□ 0.44
ABCC3-205ENST00000503337 IGHDP01880 384 aa17.78■□□□□ 0.44
ABCC3-205ENST00000503337 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.43
ABCC3-205ENST00000503337 CD163L1Q9NR16 1453 aa17.76■□□□□ 0.43
ABCC3-205ENST00000503337 GGNBP2Q9H3C7 697 aa17.76■□□□□ 0.43
ABCC3-205ENST00000503337 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
ABCC3-205ENST00000503337 IL16Q14005 1332 aa17.76■□□□□ 0.43
ABCC3-205ENST00000503337 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
ABCC3-205ENST00000503337 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
ABCC3-205ENST00000503337 FYB1O15117 783 aa17.74■□□□□ 0.43
ABCC3-205ENST00000503337 NEFMP07197 916 aa17.74■□□□□ 0.43
ABCC3-205ENST00000503337 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
ABCC3-205ENST00000503337 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
ABCC3-205ENST00000503337 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
ABCC3-205ENST00000503337 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
ABCC3-205ENST00000503337 RWDD1Q9H446 243 aaPredicted RBP17.73■□□□□ 0.43
ABCC3-205ENST00000503337 ATP7BP35670 1465 aa17.73■□□□□ 0.43
ABCC3-205ENST00000503337 CDC42BPGQ6DT37 1551 aa17.73■□□□□ 0.43
ABCC3-205ENST00000503337 DIAPH1O60610 1272 aaKnown RBP17.72■□□□□ 0.43
ABCC3-205ENST00000503337 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
ABCC3-205ENST00000503337 FTSJ3Q8IY81 847 aaKnown RBP17.71■□□□□ 0.43
ABCC3-205ENST00000503337 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
ABCC3-205ENST00000503337 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
ABCC3-205ENST00000503337 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.42
ABCC3-205ENST00000503337 MVPQ14764 893 aaKnown RBP17.7■□□□□ 0.42
ABCC3-205ENST00000503337 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
ABCC3-205ENST00000503337 SETD1AO15047 1707 aaKnown RBP17.7■□□□□ 0.42
ABCC3-205ENST00000503337 RLBP1P12271 317 aa17.69■□□□□ 0.42
ABCC3-205ENST00000503337 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
ABCC3-205ENST00000503337 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
ABCC3-205ENST00000503337 SENP3Q9H4L4 574 aaPredicted RBP17.68■□□□□ 0.42
ABCC3-205ENST00000503337 CABP1Q9NZU7 370 aa17.68■□□□□ 0.42
ABCC3-205ENST00000503337 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
ABCC3-205ENST00000503337 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
ABCC3-205ENST00000503337 PCDHB15Q9Y5E8 787 aa17.67■□□□□ 0.42
ABCC3-205ENST00000503337 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.67■□□□□ 0.42
ABCC3-205ENST00000503337 FCHSD2O94868 740 aa17.66■□□□□ 0.42
ABCC3-205ENST00000503337 RIPK4P57078 832 aa17.66■□□□□ 0.42
ABCC3-205ENST00000503337 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
ABCC3-205ENST00000503337 TNNQ9UQP3 1299 aa17.65■□□□□ 0.42
ABCC3-205ENST00000503337 UPF2Q9HAU5 1272 aaKnown RBP17.65■□□□□ 0.42
ABCC3-205ENST00000503337 DDX19BQ9UMR2 479 aa17.65■□□□□ 0.42
ABCC3-205ENST00000503337 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
ABCC3-205ENST00000503337 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.41
ABCC3-205ENST00000503337 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
ABCC3-205ENST00000503337 KNDC1Q76NI1 1749 aa17.63■□□□□ 0.41
ABCC3-205ENST00000503337 TMEM2Q9UHN6 1383 aa17.63■□□□□ 0.41
ABCC3-205ENST00000503337 IPO8O15397 1037 aaKnown RBP17.63■□□□□ 0.41
ABCC3-205ENST00000503337 BECN1Q14457 450 aa17.63■□□□□ 0.41
ABCC3-205ENST00000503337 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
ABCC3-205ENST00000503337 EDC4Q6P2E9 1401 aaKnown RBP17.63■□□□□ 0.41
ABCC3-205ENST00000503337 CEP170BQ9Y4F5 1589 aaPredicted RBP17.63■□□□□ 0.41
ABCC3-205ENST00000503337 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
ABCC3-205ENST00000503337 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
ABCC3-205ENST00000503337 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
ABCC3-205ENST00000503337 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
ABCC3-205ENST00000503337 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
ABCC3-205ENST00000503337 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
ABCC3-205ENST00000503337 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
ABCC3-205ENST00000503337 NRXN3Q9Y4C0 1643 aa17.6■□□□□ 0.41
ABCC3-205ENST00000503337 ZNF142P52746 1687 aaPredicted RBP17.6■□□□□ 0.41
ABCC3-205ENST00000503337 TRIM27P14373 513 aa17.6■□□□□ 0.41
ABCC3-205ENST00000503337 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
ABCC3-205ENST00000503337 NFKBIBQ15653 356 aa17.6■□□□□ 0.41
ABCC3-205ENST00000503337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.6■□□□□ 0.41
ABCC3-205ENST00000503337 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
ABCC3-205ENST00000503337 USP19O94966 1318 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
ABCC3-205ENST00000503337 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
ABCC3-205ENST00000503337 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
ABCC3-205ENST00000503337 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 PPIP5K1Q6PFW1 1433 aa17.59■□□□□ 0.41
ABCC3-205ENST00000503337 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
ABCC3-205ENST00000503337 SLIT1O75093 1534 aa17.58■□□□□ 0.4
ABCC3-205ENST00000503337 SETD1BQ9UPS6 1966 aaKnown RBP17.58■□□□□ 0.4
ABCC3-205ENST00000503337 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.4
ABCC3-205ENST00000503337 AATKQ6ZMQ8 1374 aa17.58■□□□□ 0.4
ABCC3-205ENST00000503337 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
ABCC3-205ENST00000503337 MON2Q7Z3U7 1717 aa17.57■□□□□ 0.4
ABCC3-205ENST00000503337 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
ABCC3-205ENST00000503337 CHMP4BQ9H444 224 aaKnown RBP17.57■□□□□ 0.4
ABCC3-205ENST00000503337 THEMISQ8N1K5 641 aaPredicted RBP17.56■□□□□ 0.4
ABCC3-205ENST00000503337 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms