RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 SLIT1O75093 1534 aa13.52□□□□□ -0.25
PDE4D-209ENST00000502575 CPS1P31327 1500 aa13.52□□□□□ -0.25
PDE4D-209ENST00000502575 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
PDE4D-209ENST00000502575 ALKQ9UM73 1620 aa13.52□□□□□ -0.25
PDE4D-209ENST00000502575 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
PDE4D-209ENST00000502575 ADGRB3O60242 1522 aa13.5□□□□□ -0.25
PDE4D-209ENST00000502575 PPARGC1BQ86YN6 1023 aaKnown RBP13.5□□□□□ -0.25
PDE4D-209ENST00000502575 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
PDE4D-209ENST00000502575 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
PDE4D-209ENST00000502575 KANK1Q14678 1352 aa13.49□□□□□ -0.25
PDE4D-209ENST00000502575 ANKRD13DQ6ZTN6 518 aa13.49□□□□□ -0.25
PDE4D-209ENST00000502575 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
PDE4D-209ENST00000502575 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
PDE4D-209ENST00000502575 ANKRD50Q9ULJ7 1429 aa13.48□□□□□ -0.25
PDE4D-209ENST00000502575 RNF166Q96A37 237 aaPredicted RBP13.48□□□□□ -0.25
PDE4D-209ENST00000502575 SPHKAPQ2M3C7 1700 aa13.47□□□□□ -0.25
PDE4D-209ENST00000502575 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
PDE4D-209ENST00000502575 NOS1P29475 1434 aa13.47□□□□□ -0.25
PDE4D-209ENST00000502575 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.25
PDE4D-209ENST00000502575 TK2O00142 265 aa13.46□□□□□ -0.25
PDE4D-209ENST00000502575 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
PDE4D-209ENST00000502575 POTEEQ6S8J3 1075 aa13.46□□□□□ -0.25
PDE4D-209ENST00000502575 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
PDE4D-209ENST00000502575 CHD2O14647 1828 aaKnown RBP13.45□□□□□ -0.26
PDE4D-209ENST00000502575 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
PDE4D-209ENST00000502575 EVI5O60447 810 aa13.44□□□□□ -0.26
PDE4D-209ENST00000502575 LTKP29376 864 aa13.44□□□□□ -0.26
PDE4D-209ENST00000502575 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
PDE4D-209ENST00000502575 RPRD2Q5VT52 1461 aaKnown RBP13.43□□□□□ -0.26
PDE4D-209ENST00000502575 FOSBP53539 338 aa13.42□□□□□ -0.26
PDE4D-209ENST00000502575 ZNF454Q8N9F8 522 aa13.42□□□□□ -0.26
PDE4D-209ENST00000502575 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
PDE4D-209ENST00000502575 TMEM2Q9UHN6 1383 aa13.42□□□□□ -0.26
PDE4D-209ENST00000502575 ITGAEP38570 1179 aa13.41□□□□□ -0.26
PDE4D-209ENST00000502575 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
PDE4D-209ENST00000502575 ROCK1Q13464 1354 aa13.41□□□□□ -0.26
PDE4D-209ENST00000502575 IDI1Q13907 227 aa13.4□□□□□ -0.26
PDE4D-209ENST00000502575 ADGRD1Q6QNK2 874 aa13.4□□□□□ -0.26
PDE4D-209ENST00000502575 EMILIN3Q9NT22 766 aa13.4□□□□□ -0.26
PDE4D-209ENST00000502575 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
PDE4D-209ENST00000502575 KIF1BO60333 1816 aa13.39□□□□□ -0.27
PDE4D-209ENST00000502575 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
PDE4D-209ENST00000502575 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
PDE4D-209ENST00000502575 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
PDE4D-209ENST00000502575 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
PDE4D-209ENST00000502575 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
PDE4D-209ENST00000502575 RRBP1Q9P2E9 1410 aaKnown RBP13.37□□□□□ -0.27
PDE4D-209ENST00000502575 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
PDE4D-209ENST00000502575 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
PDE4D-209ENST00000502575 ZDHHC16Q969W1 377 aa13.35□□□□□ -0.27
PDE4D-209ENST00000502575 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
PDE4D-209ENST00000502575 SLC4A5Q9BY07 1137 aa13.35□□□□□ -0.27
PDE4D-209ENST00000502575 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
PDE4D-209ENST00000502575 PTPREP23469 700 aa13.34□□□□□ -0.27
PDE4D-209ENST00000502575 PSEN2P49810 448 aa13.34□□□□□ -0.27
PDE4D-209ENST00000502575 KCNK17Q96T54 332 aa13.34□□□□□ -0.27
PDE4D-209ENST00000502575 EID1Q9Y6B2 187 aa13.34□□□□□ -0.27
PDE4D-209ENST00000502575 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
PDE4D-209ENST00000502575 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
PDE4D-209ENST00000502575 HSPA1LP34931 641 aa13.33□□□□□ -0.28
PDE4D-209ENST00000502575 ILDR2Q71H61 639 aa13.33□□□□□ -0.28
PDE4D-209ENST00000502575 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
PDE4D-209ENST00000502575 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
PDE4D-209ENST00000502575 NUP155O75694 1391 aa13.32□□□□□ -0.28
PDE4D-209ENST00000502575 TOM1O60784 492 aa13.31□□□□□ -0.28
PDE4D-209ENST00000502575 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
PDE4D-209ENST00000502575 SLC52A1Q9NWF4 448 aa13.31□□□□□ -0.28
PDE4D-209ENST00000502575 NAIPQ13075 1403 aa13.3□□□□□ -0.28
PDE4D-209ENST00000502575 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
PDE4D-209ENST00000502575 HRO43593 1189 aa13.3□□□□□ -0.28
PDE4D-209ENST00000502575 PHF14O94880 888 aa13.3□□□□□ -0.28
PDE4D-209ENST00000502575 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
PDE4D-209ENST00000502575 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
PDE4D-209ENST00000502575 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.29□□□□□ -0.28
PDE4D-209ENST00000502575 TRPM2O94759 1503 aa13.29□□□□□ -0.28
PDE4D-209ENST00000502575 XRN1Q8IZH2 1706 aaKnown RBP13.28□□□□□ -0.28
PDE4D-209ENST00000502575 PPLO60437 1756 aa13.28□□□□□ -0.28
PDE4D-209ENST00000502575 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
PDE4D-209ENST00000502575 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
PDE4D-209ENST00000502575 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
PDE4D-209ENST00000502575 TMEM94Q12767 1356 aa13.28□□□□□ -0.28
PDE4D-209ENST00000502575 PLEKHG1Q9ULL1 1385 aa13.28□□□□□ -0.28
PDE4D-209ENST00000502575 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
PDE4D-209ENST00000502575 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
PDE4D-209ENST00000502575 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
PDE4D-209ENST00000502575 EPAS1Q99814 870 aa13.27□□□□□ -0.29
PDE4D-209ENST00000502575 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
PDE4D-209ENST00000502575 DPYSL4O14531 572 aa13.26□□□□□ -0.29
PDE4D-209ENST00000502575 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
PDE4D-209ENST00000502575 ARIH1Q9Y4X5 557 aaPredicted RBP13.26□□□□□ -0.29
PDE4D-209ENST00000502575 SPDYE16A6NNV3 312 aaPredicted RBP13.25□□□□□ -0.29
PDE4D-209ENST00000502575 E2F4Q16254 413 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 VPS9D1Q9Y2B5 631 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 PCDHGA10Q9Y5H3 936 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 NALCNQ8IZF0 1738 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
PDE4D-209ENST00000502575 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
PDE4D-209ENST00000502575 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
PDE4D-209ENST00000502575 KCNA6P17658 529 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms