RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
PHC3-217ENST00000497658 AAMPQ13685 434 aa7.31□□□□□ -1.24
PHC3-217ENST00000497658 BECN1Q14457 450 aa7.31□□□□□ -1.24
PHC3-217ENST00000497658 ZNF454Q8N9F8 522 aa7.31□□□□□ -1.24
PHC3-217ENST00000497658 PANK3Q9H999 370 aa7.31□□□□□ -1.24
PHC3-217ENST00000497658 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
PHC3-217ENST00000497658 ZMYM3Q14202 1370 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 NINLQ9Y2I6 1382 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 ERBINQ96RT1 1412 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 FAM135AQ9P2D6 1515 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 PLEKHD1A6NEE1 506 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 WDR43Q15061 677 aaKnown RBP eCLIP7.3□□□□□ -1.24
PHC3-217ENST00000497658 CC2D1BQ5T0F9 858 aaKnown RBP7.3□□□□□ -1.24
PHC3-217ENST00000497658 L1TD1Q5T7N2 865 aaKnown RBP7.3□□□□□ -1.24
PHC3-217ENST00000497658 C20orf194Q5TEA3 1177 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 ADAMTS8Q9UP79 889 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 CDC42BPAQ5VT25 1732 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 ABCC10Q5T3U5 1492 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 MAPK8IP3Q9UPT6 1336 aa7.3□□□□□ -1.24
PHC3-217ENST00000497658 SLC4A3P48751 1232 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 CDCA8Q53HL2 280 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 TRMT2AQ8IZ69 625 aaKnown RBP7.29□□□□□ -1.24
PHC3-217ENST00000497658 OXER1Q8TDS5 423 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 CARMIL2Q6F5E8 1435 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 SLFN5Q08AF3 891 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 MRPL50Q8N5N7 158 aaKnown RBP7.29□□□□□ -1.24
PHC3-217ENST00000497658 DISP3Q9P2K9 1392 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 NPC1L1Q9UHC9 1359 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 SYNJ2O15056 1496 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 CCDC141Q6ZP82 1450 aa7.29□□□□□ -1.24
PHC3-217ENST00000497658 CGNL1Q0VF96 1302 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 ATP10AO60312 1499 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 MAGI1Q96QZ7 1491 aaPredicted RBP7.28□□□□□ -1.24
PHC3-217ENST00000497658 RGL2O15211 777 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
PHC3-217ENST00000497658 PTPREP23469 700 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 PDE3AQ14432 1141 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 KNSTRNQ9Y448 316 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 PIK3C2GO75747 1445 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
PHC3-217ENST00000497658 MRC2Q9UBG0 1479 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 PLEKHH1Q9ULM0 1364 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 SLC24A1O60721 1099 aa7.28□□□□□ -1.24
PHC3-217ENST00000497658 A2MP01023 1474 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 PLB1Q6P1J6 1458 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 PPP2R1AP30153 589 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 FOSBP53539 338 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 NBPF1Q3BBV0 1214 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 SKAP1Q86WV1 359 aa7.27□□□□□ -1.25
PHC3-217ENST00000497658 VIRMAQ69YN4 1812 aaKnown RBP7.27□□□□□ -1.25
PHC3-217ENST00000497658 E9PSI1 815 aa7.26□□□□□ -1.25
PHC3-217ENST00000497658 Q6ZNB5 142 aa7.26□□□□□ -1.25
PHC3-217ENST00000497658 ITGBL1O95965 494 aaPredicted RBP7.26□□□□□ -1.25
PHC3-217ENST00000497658 RGS3P49796 1198 aa7.26□□□□□ -1.25
PHC3-217ENST00000497658 UPF2Q9HAU5 1272 aaKnown RBP7.26□□□□□ -1.25
PHC3-217ENST00000497658 WDR7Q9Y4E6 1490 aa7.26□□□□□ -1.25
PHC3-217ENST00000497658 USP19O94966 1318 aa7.25□□□□□ -1.25
PHC3-217ENST00000497658 ABCC2Q92887 1545 aa7.25□□□□□ -1.25
PHC3-217ENST00000497658 UNC13BO14795 1591 aa7.25□□□□□ -1.25
PHC3-217ENST00000497658 GLIPR1L2Q4G1C9 344 aa7.25□□□□□ -1.25
PHC3-217ENST00000497658 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
PHC3-217ENST00000497658 NBPF3Q9H094 633 aa7.25□□□□□ -1.25
PHC3-217ENST00000497658 PLA2R1Q13018 1463 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 UPF1Q92900 1129 aaKnown RBP eCLIP7.24□□□□□ -1.25
PHC3-217ENST00000497658 SYNMO15061 1565 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 ABCA8O94911 1581 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 RNF17Q9BXT8 1623 aaKnown RBP7.24□□□□□ -1.25
PHC3-217ENST00000497658 ASXL1Q8IXJ9 1541 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 CLUAP1Q96AJ1 413 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 PLXNC1O60486 1568 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 MAST1Q9Y2H9 1570 aa7.24□□□□□ -1.25
PHC3-217ENST00000497658 MAGI2Q86UL8 1455 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 RGL3Q3MIN7 710 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 PMFBP1Q8TBY8 1022 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 ANTXR1Q9H6X2 564 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 ISY1Q9ULR0 285 aaKnown RBP7.23□□□□□ -1.25
PHC3-217ENST00000497658 IQGAP3Q86VI3 1631 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 ATP10BO94823 1461 aa7.23□□□□□ -1.25
PHC3-217ENST00000497658 HNRNPMP52272 730 aaKnown RBP eCLIP7.23□□□□□ -1.25
PHC3-217ENST00000497658 POGKQ9P215 609 aa7.22□□□□□ -1.25
PHC3-217ENST00000497658 SCAPERQ9BY12 1400 aa7.22□□□□□ -1.25
PHC3-217ENST00000497658 GOLGA6L3A6NEY3 463 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 IGHDP01880 384 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 CLCN1P35523 988 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 JPH4Q96JJ6 628 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 TBC1D32Q96NH3 1257 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 NLRP1Q9C000 1473 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 MYO5CQ9NQX4 1742 aa7.21□□□□□ -1.25
PHC3-217ENST00000497658 FSD2A1L4K1 749 aa7.21□□□□□ -1.26
PHC3-217ENST00000497658 SCAF11Q99590 1463 aaKnown RBP7.21□□□□□ -1.26
PHC3-217ENST00000497658 PREX2Q70Z35 1606 aa7.2□□□□□ -1.26
PHC3-217ENST00000497658 SAMD9LQ8IVG5 1584 aa7.2□□□□□ -1.26
PHC3-217ENST00000497658 CENPJQ9HC77 1338 aaPredicted RBP7.2□□□□□ -1.26
PHC3-217ENST00000497658 BCAR3O75815 825 aa7.2□□□□□ -1.26
PHC3-217ENST00000497658 CHMP7Q8WUX9 453 aaPredicted RBP7.2□□□□□ -1.26
PHC3-217ENST00000497658 ZDHHC16Q969W1 377 aa7.2□□□□□ -1.26
PHC3-217ENST00000497658 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms