RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 EMILIN1Q9Y6C2 1016 aa14.81□□□□□ -0.04
CDCA7-208ENST00000496441 NME9Q86XW9 330 aa14.81□□□□□ -0.04
CDCA7-208ENST00000496441 ATAD2Q6PL18 1390 aa14.81□□□□□ -0.04
CDCA7-208ENST00000496441 TRIM35Q9UPQ4 493 aa14.8□□□□□ -0.04
CDCA7-208ENST00000496441 PRKAR2BP31323 418 aa14.8□□□□□ -0.04
CDCA7-208ENST00000496441 SEC24BO95487 1268 aa14.79□□□□□ -0.04
CDCA7-208ENST00000496441 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
CDCA7-208ENST00000496441 ITPRIPQ8IWB1 547 aa14.79□□□□□ -0.04
CDCA7-208ENST00000496441 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
CDCA7-208ENST00000496441 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
CDCA7-208ENST00000496441 SSH1Q8WYL5 1049 aa14.79□□□□□ -0.04
CDCA7-208ENST00000496441 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
CDCA7-208ENST00000496441 IQSEC2Q5JU85 1478 aa14.78□□□□□ -0.04
CDCA7-208ENST00000496441 NSD2O96028 1365 aa14.78□□□□□ -0.04
CDCA7-208ENST00000496441 CLTCQ00610 1675 aaKnown RBP14.78□□□□□ -0.04
CDCA7-208ENST00000496441 ZKSCAN2Q63HK3 967 aa14.77□□□□□ -0.04
CDCA7-208ENST00000496441 PHACTR3Q96KR7 559 aa14.77□□□□□ -0.04
CDCA7-208ENST00000496441 PUS7Q96PZ0 661 aaKnown RBP14.77□□□□□ -0.04
CDCA7-208ENST00000496441 POLKQ9UBT6 870 aa14.77□□□□□ -0.04
CDCA7-208ENST00000496441 RIMBP3CA6NJZ7 1639 aa14.77□□□□□ -0.05
CDCA7-208ENST00000496441 RIMBP3BA6NNM3 1639 aa14.77□□□□□ -0.05
CDCA7-208ENST00000496441 RIMBP3Q9UFD9 1639 aa14.77□□□□□ -0.05
CDCA7-208ENST00000496441 CD163L1Q9NR16 1453 aa14.77□□□□□ -0.05
CDCA7-208ENST00000496441 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.05
CDCA7-208ENST00000496441 DZIP1LQ8IYY4 767 aaKnown RBP14.76□□□□□ -0.05
CDCA7-208ENST00000496441 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
CDCA7-208ENST00000496441 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
CDCA7-208ENST00000496441 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
CDCA7-208ENST00000496441 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
CDCA7-208ENST00000496441 ZFYVE9O95405 1425 aa14.76□□□□□ -0.05
CDCA7-208ENST00000496441 METP08581 1390 aa14.76□□□□□ -0.05
CDCA7-208ENST00000496441 TRIM27P14373 513 aa14.75□□□□□ -0.05
CDCA7-208ENST00000496441 PDZRN3Q9UPQ7 1066 aa14.75□□□□□ -0.05
CDCA7-208ENST00000496441 MVPQ14764 893 aaKnown RBP14.74□□□□□ -0.05
CDCA7-208ENST00000496441 NUDT16Q96DE0 195 aaKnown RBP14.73□□□□□ -0.05
CDCA7-208ENST00000496441 A2ML1A8K2U0 1454 aa14.73□□□□□ -0.05
CDCA7-208ENST00000496441 DIP2BQ9P265 1576 aa14.73□□□□□ -0.05
CDCA7-208ENST00000496441 WASLO00401 505 aaPredicted RBP14.73□□□□□ -0.05
CDCA7-208ENST00000496441 PMFBP1Q8TBY8 1022 aa14.73□□□□□ -0.05
CDCA7-208ENST00000496441 SLC26A8Q96RN1 970 aa14.73□□□□□ -0.05
CDCA7-208ENST00000496441 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
CDCA7-208ENST00000496441 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
CDCA7-208ENST00000496441 USP32Q8NFA0 1604 aa14.72□□□□□ -0.05
CDCA7-208ENST00000496441 ZMYM3Q14202 1370 aa14.72□□□□□ -0.05
CDCA7-208ENST00000496441 NINLQ9Y2I6 1382 aa14.72□□□□□ -0.05
CDCA7-208ENST00000496441 ARHGEF40Q8TER5 1519 aa14.71□□□□□ -0.05
CDCA7-208ENST00000496441 TMEM57Q8N5G2 664 aa14.71□□□□□ -0.05
CDCA7-208ENST00000496441 RWDD1Q9H446 243 aaPredicted RBP14.71□□□□□ -0.05
CDCA7-208ENST00000496441 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
CDCA7-208ENST00000496441 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
CDCA7-208ENST00000496441 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
CDCA7-208ENST00000496441 COG3Q96JB2 828 aa14.7□□□□□ -0.06
CDCA7-208ENST00000496441 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
CDCA7-208ENST00000496441 RSPH6AQ9H0K4 717 aa14.69□□□□□ -0.06
CDCA7-208ENST00000496441 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
CDCA7-208ENST00000496441 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
CDCA7-208ENST00000496441 FCHSD2O94868 740 aa14.69□□□□□ -0.06
CDCA7-208ENST00000496441 SLKQ9H2G2 1235 aaPredicted RBP14.69□□□□□ -0.06
CDCA7-208ENST00000496441 MAP2P11137 1827 aaKnown RBP14.68□□□□□ -0.06
CDCA7-208ENST00000496441 CCDC61Q9Y6R9 512 aa14.68□□□□□ -0.06
CDCA7-208ENST00000496441 COL3A1P02461 1466 aaPredicted RBP14.68□□□□□ -0.06
CDCA7-208ENST00000496441 AEBP1Q8IUX7 1158 aa14.66□□□□□ -0.06
CDCA7-208ENST00000496441 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
CDCA7-208ENST00000496441 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
CDCA7-208ENST00000496441 NFKBIBQ15653 356 aa14.65□□□□□ -0.06
CDCA7-208ENST00000496441 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
CDCA7-208ENST00000496441 LRRC7Q96NW7 1537 aa14.65□□□□□ -0.06
CDCA7-208ENST00000496441 LTKP29376 864 aa14.65□□□□□ -0.06
CDCA7-208ENST00000496441 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDCA7-208ENST00000496441 DDX19BQ9UMR2 479 aa14.65□□□□□ -0.06
CDCA7-208ENST00000496441 USP19O94966 1318 aa14.64□□□□□ -0.07
CDCA7-208ENST00000496441 MFAP1P55081 439 aaKnown RBP14.64□□□□□ -0.07
CDCA7-208ENST00000496441 NFE2L2Q16236 605 aa14.64□□□□□ -0.07
CDCA7-208ENST00000496441 IL13P35225 146 aa14.64□□□□□ -0.07
CDCA7-208ENST00000496441 LNPKQ9C0E8 428 aa14.64□□□□□ -0.07
CDCA7-208ENST00000496441 ADGRB2O60241 1585 aa14.64□□□□□ -0.07
CDCA7-208ENST00000496441 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 FRAT2O75474 233 aaPredicted RBP14.63□□□□□ -0.07
CDCA7-208ENST00000496441 NUTM2GQ5VZR2 741 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
CDCA7-208ENST00000496441 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 PNPLA6Q8IY17 1366 aa14.63□□□□□ -0.07
CDCA7-208ENST00000496441 KIF20BQ96Q89 1820 aa14.62□□□□□ -0.07
CDCA7-208ENST00000496441 IPO8O15397 1037 aaKnown RBP14.62□□□□□ -0.07
CDCA7-208ENST00000496441 HDGFP51858 240 aaKnown RBP14.62□□□□□ -0.07
CDCA7-208ENST00000496441 TNRQ92752 1358 aa14.62□□□□□ -0.07
CDCA7-208ENST00000496441 ROBO2Q9HCK4 1378 aa14.62□□□□□ -0.07
CDCA7-208ENST00000496441 C8orf58Q8NAV2 365 aa14.62□□□□□ -0.07
CDCA7-208ENST00000496441 HSP90AB2PQ58FF8 381 aa14.61□□□□□ -0.07
CDCA7-208ENST00000496441 MCM10Q7L590 875 aa14.61□□□□□ -0.07
CDCA7-208ENST00000496441 ACEP12821 1306 aa14.61□□□□□ -0.07
CDCA7-208ENST00000496441 MIS18AQ9NYP9 233 aa14.61□□□□□ -0.07
CDCA7-208ENST00000496441 CPS1P31327 1500 aa14.61□□□□□ -0.07
CDCA7-208ENST00000496441 RBM33Q96EV2 1170 aaKnown RBP14.6□□□□□ -0.07
CDCA7-208ENST00000496441 KIF16BQ96L93 1317 aa14.6□□□□□ -0.07
CDCA7-208ENST00000496441 CT47B1P0C2W7 299 aaPredicted RBP14.6□□□□□ -0.07
CDCA7-208ENST00000496441 TWISTNBQ3B726 338 aaPredicted RBP14.6□□□□□ -0.07
CDCA7-208ENST00000496441 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 295.2 ms