RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
CDCA7-208ENST00000496441 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
CDCA7-208ENST00000496441 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
CDCA7-208ENST00000496441 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
CDCA7-208ENST00000496441 CCDC180Q9P1Z9 1646 aa20.26■□□□□ 0.83
CDCA7-208ENST00000496441 ZCCHC6Q5VYS8 1495 aaKnown RBP20.2■□□□□ 0.82
CDCA7-208ENST00000496441 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
CDCA7-208ENST00000496441 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
CDCA7-208ENST00000496441 MYO15BQ96JP2 1530 aa19.37■□□□□ 0.69
CDCA7-208ENST00000496441 ABCC9O60706 1549 aa19.33■□□□□ 0.69
CDCA7-208ENST00000496441 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
CDCA7-208ENST00000496441 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
CDCA7-208ENST00000496441 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
CDCA7-208ENST00000496441 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
CDCA7-208ENST00000496441 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
CDCA7-208ENST00000496441 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
CDCA7-208ENST00000496441 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
CDCA7-208ENST00000496441 TRIM41Q8WV44 630 aa18.84■□□□□ 0.61
CDCA7-208ENST00000496441 NACADO15069 1562 aa18.84■□□□□ 0.61
CDCA7-208ENST00000496441 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.6
CDCA7-208ENST00000496441 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
CDCA7-208ENST00000496441 WIZO95785 1651 aa18.64■□□□□ 0.58
CDCA7-208ENST00000496441 HRCP23327 699 aa18.63■□□□□ 0.57
CDCA7-208ENST00000496441 PABPN1Q86U42 306 aaKnown RBP eCLIP18.6■□□□□ 0.576e-6■■□□□ 12.8
CDCA7-208ENST00000496441 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
CDCA7-208ENST00000496441 TRIM26Q12899 539 aaPredicted RBP18.41■□□□□ 0.54
CDCA7-208ENST00000496441 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
CDCA7-208ENST00000496441 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
CDCA7-208ENST00000496441 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
CDCA7-208ENST00000496441 ABCC8Q09428 1581 aa18.27■□□□□ 0.51
CDCA7-208ENST00000496441 TTBK1Q5TCY1 1321 aaPredicted RBP18.26■□□□□ 0.51
CDCA7-208ENST00000496441 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
CDCA7-208ENST00000496441 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
CDCA7-208ENST00000496441 SMARCA2P51531 1590 aa18.14■□□□□ 0.5
CDCA7-208ENST00000496441 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
CDCA7-208ENST00000496441 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
CDCA7-208ENST00000496441 SOGA1O94964 1423 aa18.07■□□□□ 0.48
CDCA7-208ENST00000496441 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
CDCA7-208ENST00000496441 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
CDCA7-208ENST00000496441 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
CDCA7-208ENST00000496441 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
CDCA7-208ENST00000496441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
CDCA7-208ENST00000496441 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
CDCA7-208ENST00000496441 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
CDCA7-208ENST00000496441 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CDCA7-208ENST00000496441 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
CDCA7-208ENST00000496441 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.45
CDCA7-208ENST00000496441 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
CDCA7-208ENST00000496441 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
CDCA7-208ENST00000496441 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
CDCA7-208ENST00000496441 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
CDCA7-208ENST00000496441 GOLGA3Q08378 1498 aa17.69■□□□□ 0.42
CDCA7-208ENST00000496441 EEA1Q15075 1411 aa17.68■□□□□ 0.42
CDCA7-208ENST00000496441 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
CDCA7-208ENST00000496441 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
CDCA7-208ENST00000496441 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.4
CDCA7-208ENST00000496441 APLP2Q06481 763 aa17.57■□□□□ 0.4
CDCA7-208ENST00000496441 CLIP1P30622 1438 aa17.57■□□□□ 0.4
CDCA7-208ENST00000496441 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
CDCA7-208ENST00000496441 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
CDCA7-208ENST00000496441 KIF21BO75037 1637 aa17.46■□□□□ 0.39
CDCA7-208ENST00000496441 CUX1P39880 1505 aa17.41■□□□□ 0.38
CDCA7-208ENST00000496441 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
CDCA7-208ENST00000496441 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.38
CDCA7-208ENST00000496441 CFTRP13569 1480 aa17.34■□□□□ 0.37
CDCA7-208ENST00000496441 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
CDCA7-208ENST00000496441 KIF27Q86VH2 1401 aa17.32■□□□□ 0.36
CDCA7-208ENST00000496441 DIEXFQ68CQ4 756 aaKnown RBP17.32■□□□□ 0.36
CDCA7-208ENST00000496441 KANK4Q5T7N3 995 aaPredicted RBP17.32■□□□□ 0.36
CDCA7-208ENST00000496441 ITGAEP38570 1179 aa17.31■□□□□ 0.36
CDCA7-208ENST00000496441 PRXQ9BXM0 1461 aa17.28■□□□□ 0.36
CDCA7-208ENST00000496441 P3H3Q8IVL6 736 aa17.27■□□□□ 0.35
CDCA7-208ENST00000496441 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.35
CDCA7-208ENST00000496441 CUX2O14529 1486 aa17.26■□□□□ 0.35
CDCA7-208ENST00000496441 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
CDCA7-208ENST00000496441 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
CDCA7-208ENST00000496441 ARAP1Q96P48 1450 aa17.23■□□□□ 0.35
CDCA7-208ENST00000496441 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
CDCA7-208ENST00000496441 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
CDCA7-208ENST00000496441 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
CDCA7-208ENST00000496441 IGF1RP08069 1367 aa17.17■□□□□ 0.34
CDCA7-208ENST00000496441 NESP48681 1621 aa17.16■□□□□ 0.34
CDCA7-208ENST00000496441 ZNF316A6NFI3 1004 aaPredicted RBP17.16■□□□□ 0.34
CDCA7-208ENST00000496441 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CDCA7-208ENST00000496441 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
CDCA7-208ENST00000496441 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
CDCA7-208ENST00000496441 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
CDCA7-208ENST00000496441 FANCD2Q9BXW9 1451 aa17.11■□□□□ 0.33
CDCA7-208ENST00000496441 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
CDCA7-208ENST00000496441 NEUROD1Q13562 356 aa17.1■□□□□ 0.33
CDCA7-208ENST00000496441 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CDCA7-208ENST00000496441 FAM50AQ14320 339 aaKnown RBP17.02■□□□□ 0.32
CDCA7-208ENST00000496441 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
CDCA7-208ENST00000496441 MIER1Q8N108 512 aa17■□□□□ 0.31
CDCA7-208ENST00000496441 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
CDCA7-208ENST00000496441 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
CDCA7-208ENST00000496441 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
CDCA7-208ENST00000496441 POLA1P09884 1462 aaPredicted RBP16.96■□□□□ 0.31
CDCA7-208ENST00000496441 TOPBP1Q92547 1522 aa16.95■□□□□ 0.3
CDCA7-208ENST00000496441 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms