RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 CCDC61Q9Y6R9 512 aa8.91□□□□□ -0.98
BRD9-211ENST00000494422 ITSN1Q15811 1721 aa8.91□□□□□ -0.98
BRD9-211ENST00000494422 KIF1AQ12756 1690 aa8.91□□□□□ -0.98
BRD9-211ENST00000494422 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
BRD9-211ENST00000494422 HSPA5P11021 654 aaKnown RBP8.9□□□□□ -0.98
BRD9-211ENST00000494422 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.98
BRD9-211ENST00000494422 TPRNQ4KMQ1 711 aa8.9□□□□□ -0.98
BRD9-211ENST00000494422 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
BRD9-211ENST00000494422 NPHP3Q7Z494 1330 aa8.89□□□□□ -0.99
BRD9-211ENST00000494422 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
BRD9-211ENST00000494422 NUDT16Q96DE0 195 aaKnown RBP8.89□□□□□ -0.99
BRD9-211ENST00000494422 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
BRD9-211ENST00000494422 ATP7BP35670 1465 aa8.89□□□□□ -0.99
BRD9-211ENST00000494422 ESCO1Q5FWF5 840 aa8.88□□□□□ -0.99
BRD9-211ENST00000494422 PHF8Q9UPP1 1060 aa8.88□□□□□ -0.99
BRD9-211ENST00000494422 AHDC1Q5TGY3 1603 aaPredicted RBP8.87□□□□□ -0.99
BRD9-211ENST00000494422 PSME1Q06323 249 aa8.87□□□□□ -0.99
BRD9-211ENST00000494422 BRINP3Q76B58 766 aa8.87□□□□□ -0.99
BRD9-211ENST00000494422 TOPAZ1Q8N9V7 1692 aa8.87□□□□□ -0.99
BRD9-211ENST00000494422 ROBO1Q9Y6N7 1651 aa8.87□□□□□ -0.99
BRD9-211ENST00000494422 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
BRD9-211ENST00000494422 CABP2Q9NPB3 220 aa8.86□□□□□ -0.99
BRD9-211ENST00000494422 TERF2IPQ9NYB0 399 aa8.86□□□□□ -0.99
BRD9-211ENST00000494422 NHSL1Q5SYE7 1610 aa8.86□□□□□ -0.99
BRD9-211ENST00000494422 USP32Q8NFA0 1604 aa8.86□□□□□ -0.99
BRD9-211ENST00000494422 PPIP5K1Q6PFW1 1433 aa8.86□□□□□ -0.99
BRD9-211ENST00000494422 PRR36Q9H6K5 1346 aa8.85□□□□□ -0.99
BRD9-211ENST00000494422 PRR29P0C7W0 189 aa8.85□□□□□ -0.99
BRD9-211ENST00000494422 PIP4K2BP78356 416 aa8.85□□□□□ -0.99
BRD9-211ENST00000494422 HDGFL2Q7Z4V5 671 aaPredicted RBP8.85□□□□□ -0.99
BRD9-211ENST00000494422 NGDNQ8NEJ9 315 aaKnown RBP8.85□□□□□ -0.99
BRD9-211ENST00000494422 SBNO1A3KN83 1393 aa8.85□□□□□ -0.99
BRD9-211ENST00000494422 SOS2Q07890 1332 aaPredicted RBP8.84□□□□□ -0.99
BRD9-211ENST00000494422 VSIG10Q8N0Z9 540 aa8.84□□□□□ -0.99
BRD9-211ENST00000494422 LRRC59Q96AG4 307 aaKnown RBP8.84□□□□□ -0.99
BRD9-211ENST00000494422 ORAI2Q96SN7 254 aa8.84□□□□□ -0.99
BRD9-211ENST00000494422 ANKRD36BQ8N2N9 1353 aa8.84□□□□□ -0.99
BRD9-211ENST00000494422 DISP3Q9P2K9 1392 aa8.84□□□□□ -0.99
BRD9-211ENST00000494422 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
BRD9-211ENST00000494422 NUTM2FA1L443 756 aa8.83□□□□□ -1
BRD9-211ENST00000494422 CABP1Q9NZU7 370 aa8.83□□□□□ -1
BRD9-211ENST00000494422 RGPD8O14715 1765 aaPredicted RBP8.83□□□□□ -1
BRD9-211ENST00000494422 ARHGEF10O15013 1369 aa8.83□□□□□ -1
BRD9-211ENST00000494422 ACEP12821 1306 aa8.82□□□□□ -1
BRD9-211ENST00000494422 TTC21AQ8NDW8 1320 aa8.82□□□□□ -1
BRD9-211ENST00000494422 KRT28Q7Z3Y7 464 aa8.82□□□□□ -1
BRD9-211ENST00000494422 TMC1Q8TDI8 760 aa8.82□□□□□ -1
BRD9-211ENST00000494422 PHLPP1O60346 1717 aa8.82□□□□□ -1
BRD9-211ENST00000494422 USP6P35125 1406 aa8.81□□□□□ -1
BRD9-211ENST00000494422 EDC4Q6P2E9 1401 aaKnown RBP8.81□□□□□ -1
BRD9-211ENST00000494422 FOXO3O43524 673 aa8.81□□□□□ -1
BRD9-211ENST00000494422 PMFBP1Q8TBY8 1022 aa8.81□□□□□ -1
BRD9-211ENST00000494422 CCDC7Q96M83 1385 aa8.81□□□□□ -1
BRD9-211ENST00000494422 JCADQ9P266 1359 aa8.81□□□□□ -1
BRD9-211ENST00000494422 PXDNQ92626 1479 aa8.81□□□□□ -1
BRD9-211ENST00000494422 KIF7Q2M1P5 1343 aa8.8□□□□□ -1
BRD9-211ENST00000494422 TNS3Q68CZ2 1445 aa8.8□□□□□ -1
BRD9-211ENST00000494422 COL16A1Q07092 1604 aaPredicted RBP8.8□□□□□ -1
BRD9-211ENST00000494422 TULP1O00294 542 aaPredicted RBP8.8□□□□□ -1
BRD9-211ENST00000494422 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
BRD9-211ENST00000494422 AKAP12Q02952 1782 aa8.8□□□□□ -1
BRD9-211ENST00000494422 SSH2Q76I76 1423 aa8.8□□□□□ -1
BRD9-211ENST00000494422 SPATA31A6Q5VVP1 1343 aa8.8□□□□□ -1
BRD9-211ENST00000494422 SPATA31A3Q5VYP0 1347 aa8.8□□□□□ -1
BRD9-211ENST00000494422 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
BRD9-211ENST00000494422 SLC12A5Q9H2X9 1139 aa8.79□□□□□ -1
BRD9-211ENST00000494422 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
BRD9-211ENST00000494422 MON2Q7Z3U7 1717 aa8.79□□□□□ -1
BRD9-211ENST00000494422 MYOM1P52179 1685 aa8.78□□□□□ -1
BRD9-211ENST00000494422 SHPRHQ149N8 1683 aa8.78□□□□□ -1
BRD9-211ENST00000494422 CD163L1Q9NR16 1453 aa8.78□□□□□ -1
BRD9-211ENST00000494422 A0A1W2PP64 1363 aa8.78□□□□□ -1
BRD9-211ENST00000494422 HSPA1LP34931 641 aa8.78□□□□□ -1
BRD9-211ENST00000494422 NLRP13Q86W25 1043 aa8.78□□□□□ -1
BRD9-211ENST00000494422 WASHC2AQ641Q2 1341 aa8.78□□□□□ -1
BRD9-211ENST00000494422 TTC21BQ7Z4L5 1316 aa8.78□□□□□ -1
BRD9-211ENST00000494422 TRPM3Q9HCF6 1732 aaPredicted RBP8.77□□□□□ -1
BRD9-211ENST00000494422 NSD2O96028 1365 aa8.77□□□□□ -1.01
BRD9-211ENST00000494422 COL22A1Q8NFW1 1626 aaPredicted RBP8.77□□□□□ -1.01
BRD9-211ENST00000494422 ZNF316A6NFI3 1004 aaPredicted RBP8.77□□□□□ -1.01
BRD9-211ENST00000494422 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
BRD9-211ENST00000494422 MED1Q15648 1581 aaPredicted RBP8.77□□□□□ -1.01
BRD9-211ENST00000494422 NRKQ7Z2Y5 1582 aa8.77□□□□□ -1.01
BRD9-211ENST00000494422 CGNL1Q0VF96 1302 aa8.77□□□□□ -1.01
BRD9-211ENST00000494422 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 NPC1L1Q9UHC9 1359 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
BRD9-211ENST00000494422 PAK3O75914 559 aaPredicted RBP8.76□□□□□ -1.01
BRD9-211ENST00000494422 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 KCNH5Q8NCM2 988 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 KNSTRNQ9Y448 316 aa8.76□□□□□ -1.01
BRD9-211ENST00000494422 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
BRD9-211ENST00000494422 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
BRD9-211ENST00000494422 PANK3Q9H999 370 aa8.75□□□□□ -1.01
BRD9-211ENST00000494422 DDX17Q92841 729 aaKnown RBP8.74□□□□□ -1.01
BRD9-211ENST00000494422 USP19O94966 1318 aa8.74□□□□□ -1.01
BRD9-211ENST00000494422 NSD3Q9BZ95 1437 aa8.73□□□□□ -1.01
BRD9-211ENST00000494422 NLRP6P59044 892 aa8.73□□□□□ -1.01
BRD9-211ENST00000494422 XPCQ01831 940 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms