RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 KCNV2Q8TDN2 545 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 MS4A4AQ96JQ5 239 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 C19orf44Q9H6X5 657 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 CABP2Q9NPB3 220 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 TRPC6Q9Y210 931 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 USP19O94966 1318 aa7.18□□□□□ -1.26
UBR4-215ENST00000492606 SOX12O15370 315 aa7.17□□□□□ -1.26
UBR4-215ENST00000492606 PITPNM2Q9BZ72 1349 aa7.17□□□□□ -1.26
UBR4-215ENST00000492606 PARD3Q8TEW0 1356 aa7.17□□□□□ -1.26
UBR4-215ENST00000492606 FMN1Q68DA7 1419 aa7.17□□□□□ -1.26
UBR4-215ENST00000492606 CD44P16070 742 aaKnown RBP7.16□□□□□ -1.26
UBR4-215ENST00000492606 ABHD8Q96I13 439 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 EID1Q9Y6B2 187 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 ADCY9O60503 1353 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 NCOA3Q9Y6Q9 1424 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 MYOM2P54296 1465 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 SLIT2O94813 1529 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 EFCAB6Q5THR3 1501 aa7.16□□□□□ -1.26
UBR4-215ENST00000492606 COL22A1Q8NFW1 1626 aaPredicted RBP7.16□□□□□ -1.26
UBR4-215ENST00000492606 PAK3O75914 559 aaPredicted RBP7.15□□□□□ -1.26
UBR4-215ENST00000492606 TRIM37O94972 964 aa7.15□□□□□ -1.26
UBR4-215ENST00000492606 APBA3O96018 575 aa7.15□□□□□ -1.26
UBR4-215ENST00000492606 PELP1Q8IZL8 1130 aaKnown RBP7.15□□□□□ -1.26
UBR4-215ENST00000492606 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.26
UBR4-215ENST00000492606 C19orf67A6NJJ6 358 aa7.14□□□□□ -1.27
UBR4-215ENST00000492606 ADGRB2O60241 1585 aa7.14□□□□□ -1.27
UBR4-215ENST00000492606 NLRP6P59044 892 aa7.14□□□□□ -1.27
UBR4-215ENST00000492606 MST1RQ04912 1400 aa7.14□□□□□ -1.27
UBR4-215ENST00000492606 CFAP65Q6ZU64 1925 aaKnown RBP7.13□□□□□ -1.27
UBR4-215ENST00000492606 A0A0C4DFX4 3053 aa7.13□□□□□ -1.27
UBR4-215ENST00000492606 MAP3K5Q99683 1374 aa7.13□□□□□ -1.27
UBR4-215ENST00000492606 INO80Q9ULG1 1556 aaPredicted RBP7.12□□□□□ -1.27
UBR4-215ENST00000492606 TMEM2Q9UHN6 1383 aa7.12□□□□□ -1.27
UBR4-215ENST00000492606 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
UBR4-215ENST00000492606 VPS72Q15906 364 aa7.12□□□□□ -1.27
UBR4-215ENST00000492606 ANO8Q9HCE9 1232 aaPredicted RBP7.12□□□□□ -1.27
UBR4-215ENST00000492606 ERVK-7P63135 1459 aa7.11□□□□□ -1.27
UBR4-215ENST00000492606 WASHC2CQ9Y4E1 1318 aa7.11□□□□□ -1.27
UBR4-215ENST00000492606 MS4A3Q96HJ5 214 aa7.11□□□□□ -1.27
UBR4-215ENST00000492606 CROCC2H7BZ55 1655 aa7.11□□□□□ -1.27
UBR4-215ENST00000492606 TMEM131LA2VDJ0 1609 aa7.11□□□□□ -1.27
UBR4-215ENST00000492606 SOS2Q07890 1332 aaPredicted RBP7.1□□□□□ -1.27
UBR4-215ENST00000492606 A0A0G2JS52 829 aa7.1□□□□□ -1.27
UBR4-215ENST00000492606 TOMM70O94826 608 aa7.1□□□□□ -1.27
UBR4-215ENST00000492606 MYT1Q01538 1121 aa7.1□□□□□ -1.27
UBR4-215ENST00000492606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
UBR4-215ENST00000492606 LAMC1P11047 1609 aa7.09□□□□□ -1.27
UBR4-215ENST00000492606 CCDC85CA6NKD9 419 aa7.09□□□□□ -1.27
UBR4-215ENST00000492606 PPP1R15AO75807 674 aaPredicted RBP7.09□□□□□ -1.27
UBR4-215ENST00000492606 FAM98CQ17RN3 349 aaKnown RBP7.09□□□□□ -1.27
UBR4-215ENST00000492606 ARXQ96QS3 562 aa7.09□□□□□ -1.27
UBR4-215ENST00000492606 WDR70Q9NW82 654 aa7.08□□□□□ -1.28
UBR4-215ENST00000492606 CCDC9Q9Y3X0 531 aaKnown RBP7.08□□□□□ -1.28
UBR4-215ENST00000492606 PREX2Q70Z35 1606 aa7.08□□□□□ -1.28
UBR4-215ENST00000492606 CACNA1AO00555 2505 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 KIF3BO15066 747 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 FOXN1O15353 648 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 MFSD10Q14728 455 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 TMEM106CQ9BVX2 250 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 CRISPLD2Q9H0B8 497 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
UBR4-215ENST00000492606 SYCP2Q9BX26 1530 aa7.06□□□□□ -1.28
UBR4-215ENST00000492606 PIK3C2BO00750 1634 aa7.06□□□□□ -1.28
UBR4-215ENST00000492606 NLGN2Q8NFZ4 835 aa7.06□□□□□ -1.28
UBR4-215ENST00000492606 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
UBR4-215ENST00000492606 DCCP43146 1447 aa7.05□□□□□ -1.28
UBR4-215ENST00000492606 GRIN3BO60391 1043 aa7.05□□□□□ -1.28
UBR4-215ENST00000492606 EVX2Q03828 476 aa7.05□□□□□ -1.28
UBR4-215ENST00000492606 E2F4Q16254 413 aa7.05□□□□□ -1.28
UBR4-215ENST00000492606 USP32Q8NFA0 1604 aa7.05□□□□□ -1.28
UBR4-215ENST00000492606 TTLL13PA6NNM8 815 aa7.04□□□□□ -1.28
UBR4-215ENST00000492606 DHX29Q7Z478 1369 aaKnown RBP7.04□□□□□ -1.28
UBR4-215ENST00000492606 ADGRB3O60242 1522 aa7.03□□□□□ -1.28
UBR4-215ENST00000492606 TIE1P35590 1138 aa7.03□□□□□ -1.28
UBR4-215ENST00000492606 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
UBR4-215ENST00000492606 LMOD2Q6P5Q4 547 aa7.03□□□□□ -1.28
UBR4-215ENST00000492606 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
UBR4-215ENST00000492606 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
UBR4-215ENST00000492606 PLCH1Q4KWH8 1693 aa7.03□□□□□ -1.28
UBR4-215ENST00000492606 ABCC5O15440 1437 aa7.02□□□□□ -1.29
UBR4-215ENST00000492606 ARHGEF28Q8N1W1 1705 aaKnown RBP7.02□□□□□ -1.29
UBR4-215ENST00000492606 TESPA1A2RU30 521 aaPredicted RBP7.02□□□□□ -1.29
UBR4-215ENST00000492606 SEMA3EO15041 775 aa7.02□□□□□ -1.29
UBR4-215ENST00000492606 CAMK2BQ13554 666 aa7.02□□□□□ -1.29
UBR4-215ENST00000492606 FAM196AQ6ZSG2 479 aa7.02□□□□□ -1.29
UBR4-215ENST00000492606 LARP6Q9BRS8 491 aaKnown RBP7.02□□□□□ -1.29
UBR4-215ENST00000492606 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
UBR4-215ENST00000492606 THSD7AQ9UPZ6 1657 aa7.02□□□□□ -1.29
UBR4-215ENST00000492606 DHX57Q6P158 1386 aaKnown RBP7.01□□□□□ -1.29
UBR4-215ENST00000492606 GALR2O43603 387 aaPredicted RBP7.01□□□□□ -1.29
UBR4-215ENST00000492606 RBM46Q8TBY0 533 aaKnown RBP7.01□□□□□ -1.29
UBR4-215ENST00000492606 ORAI2Q96SN7 254 aa7.01□□□□□ -1.29
UBR4-215ENST00000492606 ZNF777Q9ULD5 760 aaPredicted RBP7.01□□□□□ -1.29
UBR4-215ENST00000492606 ADGRL3Q9HAR2 1447 aa7.01□□□□□ -1.29
UBR4-215ENST00000492606 PDE4AP27815 886 aa7□□□□□ -1.29
UBR4-215ENST00000492606 CDC42BPAQ5VT25 1732 aa7□□□□□ -1.29
UBR4-215ENST00000492606 NWD2Q9ULI1 1742 aa7□□□□□ -1.29
UBR4-215ENST00000492606 TROQ12816 1431 aaPredicted RBP7□□□□□ -1.29
UBR4-215ENST00000492606 DPY19L2Q6NUT2 758 aa6.99□□□□□ -1.29
UBR4-215ENST00000492606 NMRK2Q9NPI5 230 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms