RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
HUWE1-213ENST00000489876 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
HUWE1-213ENST00000489876 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
HUWE1-213ENST00000489876 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
HUWE1-213ENST00000489876 CRISPLD2Q9H0B8 497 aa12.35□□□□□ -0.43
HUWE1-213ENST00000489876 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
HUWE1-213ENST00000489876 AXIN2Q9Y2T1 843 aa12.34□□□□□ -0.43
HUWE1-213ENST00000489876 ZFYVE9O95405 1425 aa12.34□□□□□ -0.43
HUWE1-213ENST00000489876 LRRC7Q96NW7 1537 aa12.33□□□□□ -0.44
HUWE1-213ENST00000489876 SLC26A8Q96RN1 970 aa12.33□□□□□ -0.44
HUWE1-213ENST00000489876 HFM1A2PYH4 1435 aa12.33□□□□□ -0.44
HUWE1-213ENST00000489876 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
HUWE1-213ENST00000489876 RBM33Q96EV2 1170 aaKnown RBP12.32□□□□□ -0.44
HUWE1-213ENST00000489876 UBAP1LF5GYI3 381 aa12.31□□□□□ -0.44
HUWE1-213ENST00000489876 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
HUWE1-213ENST00000489876 IQSEC2Q5JU85 1478 aa12.31□□□□□ -0.44
HUWE1-213ENST00000489876 CPS1P31327 1500 aa12.31□□□□□ -0.44
HUWE1-213ENST00000489876 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
HUWE1-213ENST00000489876 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
HUWE1-213ENST00000489876 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
HUWE1-213ENST00000489876 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
HUWE1-213ENST00000489876 EID1Q9Y6B2 187 aa12.29□□□□□ -0.44
HUWE1-213ENST00000489876 NRXN3Q9Y4C0 1643 aa12.29□□□□□ -0.44
HUWE1-213ENST00000489876 KIF1BO60333 1816 aa12.28□□□□□ -0.44
HUWE1-213ENST00000489876 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
HUWE1-213ENST00000489876 PIP4K2BP78356 416 aa12.27□□□□□ -0.45
HUWE1-213ENST00000489876 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.45
HUWE1-213ENST00000489876 ADAMTS13Q76LX8 1427 aa12.27□□□□□ -0.45
HUWE1-213ENST00000489876 TRPM2O94759 1503 aa12.27□□□□□ -0.45
HUWE1-213ENST00000489876 PPP1R15BQ5SWA1 713 aa12.26□□□□□ -0.45
HUWE1-213ENST00000489876 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
HUWE1-213ENST00000489876 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
HUWE1-213ENST00000489876 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
HUWE1-213ENST00000489876 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
HUWE1-213ENST00000489876 NWD1Q149M9 1564 aa12.25□□□□□ -0.45
HUWE1-213ENST00000489876 BCANQ96GW7 911 aa12.24□□□□□ -0.45
HUWE1-213ENST00000489876 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
HUWE1-213ENST00000489876 PTPRUQ92729 1446 aa12.23□□□□□ -0.45
HUWE1-213ENST00000489876 TMEM94Q12767 1356 aa12.22□□□□□ -0.45
HUWE1-213ENST00000489876 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
HUWE1-213ENST00000489876 HSPA1LP34931 641 aa12.22□□□□□ -0.45
HUWE1-213ENST00000489876 PPLO60437 1756 aa12.22□□□□□ -0.45
HUWE1-213ENST00000489876 SETD1AO15047 1707 aaKnown RBP12.22□□□□□ -0.45
HUWE1-213ENST00000489876 KCNA6P17658 529 aa12.21□□□□□ -0.45
HUWE1-213ENST00000489876 PBX2P40425 430 aa12.21□□□□□ -0.45
HUWE1-213ENST00000489876 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
HUWE1-213ENST00000489876 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
HUWE1-213ENST00000489876 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
HUWE1-213ENST00000489876 SETD5Q9C0A6 1442 aa12.2□□□□□ -0.46
HUWE1-213ENST00000489876 RAB3GAP2Q9H2M9 1393 aa12.19□□□□□ -0.46
HUWE1-213ENST00000489876 PSEN2P49810 448 aa12.19□□□□□ -0.46
HUWE1-213ENST00000489876 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
HUWE1-213ENST00000489876 MPHOSPH9Q99550 1183 aa12.19□□□□□ -0.46
HUWE1-213ENST00000489876 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
HUWE1-213ENST00000489876 XRN1Q8IZH2 1706 aaKnown RBP12.18□□□□□ -0.46
HUWE1-213ENST00000489876 IFT172Q9UG01 1749 aa12.18□□□□□ -0.46
HUWE1-213ENST00000489876 PDE4AP27815 886 aa12.18□□□□□ -0.46
HUWE1-213ENST00000489876 METP08581 1390 aa12.18□□□□□ -0.46
HUWE1-213ENST00000489876 TOM1O60784 492 aa12.17□□□□□ -0.46
HUWE1-213ENST00000489876 TBX22Q9Y458 520 aa12.17□□□□□ -0.46
HUWE1-213ENST00000489876 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.17□□□□□ -0.46
HUWE1-213ENST00000489876 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
HUWE1-213ENST00000489876 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
HUWE1-213ENST00000489876 TBC1D12O60347 775 aa12.16□□□□□ -0.46
HUWE1-213ENST00000489876 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.16□□□□□ -0.46
HUWE1-213ENST00000489876 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
HUWE1-213ENST00000489876 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
HUWE1-213ENST00000489876 MFSD10Q14728 455 aa12.15□□□□□ -0.46
HUWE1-213ENST00000489876 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
HUWE1-213ENST00000489876 SPATA31E1Q6ZUB1 1445 aa12.14□□□□□ -0.47
HUWE1-213ENST00000489876 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
HUWE1-213ENST00000489876 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
HUWE1-213ENST00000489876 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
HUWE1-213ENST00000489876 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
HUWE1-213ENST00000489876 AMOTL2Q9Y2J4 779 aa12.13□□□□□ -0.47
HUWE1-213ENST00000489876 NALCNQ8IZF0 1738 aa12.13□□□□□ -0.47
HUWE1-213ENST00000489876 ADGRF5Q8IZF2 1346 aa12.12□□□□□ -0.47
HUWE1-213ENST00000489876 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
HUWE1-213ENST00000489876 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
HUWE1-213ENST00000489876 ADGRD1Q6QNK2 874 aa12.12□□□□□ -0.47
HUWE1-213ENST00000489876 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
HUWE1-213ENST00000489876 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
HUWE1-213ENST00000489876 ASXL1Q8IXJ9 1541 aa12.11□□□□□ -0.47
HUWE1-213ENST00000489876 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
HUWE1-213ENST00000489876 PTGER2P43116 358 aa12.11□□□□□ -0.47
HUWE1-213ENST00000489876 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
HUWE1-213ENST00000489876 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
HUWE1-213ENST00000489876 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
HUWE1-213ENST00000489876 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
HUWE1-213ENST00000489876 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
HUWE1-213ENST00000489876 MSH6P52701 1360 aa12.07□□□□□ -0.48
HUWE1-213ENST00000489876 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
HUWE1-213ENST00000489876 EVI5O60447 810 aa12.07□□□□□ -0.48
HUWE1-213ENST00000489876 FOSBP53539 338 aa12.07□□□□□ -0.48
HUWE1-213ENST00000489876 FAM135BQ49AJ0 1406 aa12.07□□□□□ -0.48
HUWE1-213ENST00000489876 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
HUWE1-213ENST00000489876 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
HUWE1-213ENST00000489876 HRO43593 1189 aa12.06□□□□□ -0.48
HUWE1-213ENST00000489876 TMEM132EQ6IEE7 984 aa12.06□□□□□ -0.48
HUWE1-213ENST00000489876 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms