RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
TMEM39A-209ENST00000486235 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 DGAT1O75907 488 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PRR20EP86478 221 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PRR20CP86479 221 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PRR20DP86480 221 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PRR20BP86481 221 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PRR20AP86496 221 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 FUT2Q10981 343 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 FOXC1Q12948 553 aa10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-209ENST00000486235 ABCA9Q8IUA7 1624 aa10.92□□□□□ -0.66
TMEM39A-209ENST00000486235 POTECB2RU33 542 aa10.92□□□□□ -0.66
TMEM39A-209ENST00000486235 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
TMEM39A-209ENST00000486235 MORN1Q5T089 497 aa10.91□□□□□ -0.66
TMEM39A-209ENST00000486235 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
TMEM39A-209ENST00000486235 NEO1Q92859 1461 aa10.9□□□□□ -0.66
TMEM39A-209ENST00000486235 RANGAP1P46060 587 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-209ENST00000486235 MADDQ8WXG6 1647 aa10.9□□□□□ -0.66
TMEM39A-209ENST00000486235 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
TMEM39A-209ENST00000486235 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-209ENST00000486235 FRMPD1Q5SYB0 1578 aa10.89□□□□□ -0.67
TMEM39A-209ENST00000486235 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
TMEM39A-209ENST00000486235 RAPGEF6Q8TEU7 1601 aa10.88□□□□□ -0.67
TMEM39A-209ENST00000486235 ATP6V1AP38606 617 aa10.88□□□□□ -0.67
TMEM39A-209ENST00000486235 BCORL1Q5H9F3 1711 aa10.88□□□□□ -0.67
TMEM39A-209ENST00000486235 FCF1Q9Y324 198 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-209ENST00000486235 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
TMEM39A-209ENST00000486235 HSPA2P54652 639 aa10.87□□□□□ -0.67
TMEM39A-209ENST00000486235 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-209ENST00000486235 THAP11Q96EK4 314 aa10.87□□□□□ -0.67
TMEM39A-209ENST00000486235 PKD2L1Q9P0L9 805 aa10.87□□□□□ -0.67
TMEM39A-209ENST00000486235 SAMD9Q5K651 1589 aa10.86□□□□□ -0.67
TMEM39A-209ENST00000486235 FMNL1O95466 1100 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-209ENST00000486235 GCGRP47871 477 aa10.86□□□□□ -0.67
TMEM39A-209ENST00000486235 PRDM9Q9NQV7 894 aa10.86□□□□□ -0.67
TMEM39A-209ENST00000486235 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-209ENST00000486235 RIMS1Q86UR5 1692 aaKnown RBP10.85□□□□□ -0.67
TMEM39A-209ENST00000486235 FHOD3Q2V2M9 1422 aa10.85□□□□□ -0.67
TMEM39A-209ENST00000486235 ARHGEF40Q8TER5 1519 aa10.85□□□□□ -0.67
TMEM39A-209ENST00000486235 GPIHBP1Q8IV16 184 aa10.85□□□□□ -0.67
TMEM39A-209ENST00000486235 DENND4BO75064 1496 aaPredicted RBP10.85□□□□□ -0.67
TMEM39A-209ENST00000486235 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
TMEM39A-209ENST00000486235 SULF1Q8IWU6 871 aa10.84□□□□□ -0.67
TMEM39A-209ENST00000486235 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
TMEM39A-209ENST00000486235 PLEKHD1A6NEE1 506 aa10.83□□□□□ -0.68
TMEM39A-209ENST00000486235 MLECQ14165 292 aa10.83□□□□□ -0.68
TMEM39A-209ENST00000486235 FANCAO15360 1455 aa10.82□□□□□ -0.68
TMEM39A-209ENST00000486235 RNF19BQ6ZMZ0 732 aa10.82□□□□□ -0.68
TMEM39A-209ENST00000486235 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
TMEM39A-209ENST00000486235 CD2BP2O95400 341 aaKnown RBP10.81□□□□□ -0.68
TMEM39A-209ENST00000486235 RPIAP49247 311 aa10.81□□□□□ -0.68
TMEM39A-209ENST00000486235 YEATS2Q9ULM3 1422 aa10.81□□□□□ -0.68
TMEM39A-209ENST00000486235 RICTORQ6R327 1708 aa10.81□□□□□ -0.68
TMEM39A-209ENST00000486235 BRICD5Q6PL45 260 aa10.8□□□□□ -0.68
TMEM39A-209ENST00000486235 POGZQ7Z3K3 1410 aa10.8□□□□□ -0.68
TMEM39A-209ENST00000486235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM39A-209ENST00000486235 ZFYVE16Q7Z3T8 1539 aa10.79□□□□□ -0.68
TMEM39A-209ENST00000486235 TTC37Q6PGP7 1564 aa10.78□□□□□ -0.68
TMEM39A-209ENST00000486235 CYP4X1Q8N118 509 aa10.78□□□□□ -0.68
TMEM39A-209ENST00000486235 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
TMEM39A-209ENST00000486235 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
TMEM39A-209ENST00000486235 SIGLEC1Q9BZZ2 1709 aa10.78□□□□□ -0.68
TMEM39A-209ENST00000486235 CFAP74Q9C0B2 1584 aa10.77□□□□□ -0.68
TMEM39A-209ENST00000486235 EFCAB5A4FU69 1503 aa10.77□□□□□ -0.69
TMEM39A-209ENST00000486235 ZMYM4Q5VZL5 1548 aa10.77□□□□□ -0.69
TMEM39A-209ENST00000486235 CDK13Q14004 1512 aaKnown RBP10.76□□□□□ -0.69
TMEM39A-209ENST00000486235 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
TMEM39A-209ENST00000486235 TOR4AQ9NXH8 423 aa10.76□□□□□ -0.69
TMEM39A-209ENST00000486235 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
TMEM39A-209ENST00000486235 HECW1Q76N89 1606 aa10.76□□□□□ -0.69
TMEM39A-209ENST00000486235 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
TMEM39A-209ENST00000486235 ZBTB24O43167 697 aaPredicted RBP10.75□□□□□ -0.69
TMEM39A-209ENST00000486235 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
TMEM39A-209ENST00000486235 MAGI2Q86UL8 1455 aa10.74□□□□□ -0.69
TMEM39A-209ENST00000486235 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-209ENST00000486235 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
TMEM39A-209ENST00000486235 FER1L4A9Z1Z3 1794 aa10.73□□□□□ -0.69
TMEM39A-209ENST00000486235 TTC24A2A3L6 582 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 CD46P15529 392 aa10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 MSS51Q4VC12 460 aa10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 HLA-CQ95604 372 aa10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 PLCH2O75038 1416 aa10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 EEA1Q15075 1411 aa10.72□□□□□ -0.69
TMEM39A-209ENST00000486235 ATP10AO60312 1499 aa10.71□□□□□ -0.69
TMEM39A-209ENST00000486235 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.69
TMEM39A-209ENST00000486235 ARHGEF12Q9NZN5 1544 aa10.71□□□□□ -0.69
TMEM39A-209ENST00000486235 AXIN1O15169 862 aa10.7□□□□□ -0.7
TMEM39A-209ENST00000486235 KDM4AO75164 1064 aa10.7□□□□□ -0.7
TMEM39A-209ENST00000486235 MAP2K5Q13163 448 aa10.7□□□□□ -0.7
TMEM39A-209ENST00000486235 Q3C1V9 767 aa10.7□□□□□ -0.7
TMEM39A-209ENST00000486235 EFCAB2Q5VUJ9 269 aa10.7□□□□□ -0.7
TMEM39A-209ENST00000486235 DISP3Q9P2K9 1392 aa10.69□□□□□ -0.7
TMEM39A-209ENST00000486235 IRF6O14896 467 aa10.69□□□□□ -0.7
TMEM39A-209ENST00000486235 GMPR2Q9P2T1 348 aaKnown RBP10.69□□□□□ -0.7
TMEM39A-209ENST00000486235 AVPP01185 164 aa10.68□□□□□ -0.7
TMEM39A-209ENST00000486235 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
TMEM39A-209ENST00000486235 PREX1Q8TCU6 1659 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms