RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
NHLRC3-205ENST00000485407 SLC4A5Q9BY07 1137 aa8.53□□□□□ -1.04
NHLRC3-205ENST00000485407 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
NHLRC3-205ENST00000485407 CCDC18Q5T9S5 1454 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 FYCO1Q9BQS8 1478 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 RFC5P40937 340 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 CALR3Q96L12 384 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 PCDHGA10Q9Y5H3 936 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 SRCAPQ6ZRS2 3230 aa8.52□□□□□ -1.05
NHLRC3-205ENST00000485407 CDHR5Q9HBB8 845 aa8.51□□□□□ -1.05
NHLRC3-205ENST00000485407 PHLDB1Q86UU1 1377 aa8.5□□□□□ -1.05
NHLRC3-205ENST00000485407 GDPD2Q9HCC8 539 aa8.5□□□□□ -1.05
NHLRC3-205ENST00000485407 PREX1Q8TCU6 1659 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 PATL2C9JE40 543 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 MAP3K7O43318 606 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 PHF14O94880 888 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 RAPGEF3O95398 923 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 HSPA1LP34931 641 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 ZNF428Q96B54 188 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 ZBED2Q9BTP6 218 aa8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 NPDC1Q9NQX5 325 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-205ENST00000485407 POGZQ7Z3K3 1410 aa8.48□□□□□ -1.05
NHLRC3-205ENST00000485407 VPS8Q8N3P4 1428 aa8.48□□□□□ -1.05
NHLRC3-205ENST00000485407 ABL2P42684 1182 aa8.48□□□□□ -1.05
NHLRC3-205ENST00000485407 TYW1BQ6NUM6 668 aa8.48□□□□□ -1.05
NHLRC3-205ENST00000485407 ABCA9Q8IUA7 1624 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 TROQ12816 1431 aaPredicted RBP8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 EN1Q05925 392 aaPredicted RBP8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 NLRP7Q8WX94 980 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 STAC3Q96MF2 364 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 HCSTQ9UBK5 93 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 CDK13Q14004 1512 aaKnown RBP8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 TTC37Q6PGP7 1564 aa8.47□□□□□ -1.05
NHLRC3-205ENST00000485407 LRRIQ1Q96JM4 1722 aa8.46□□□□□ -1.05
NHLRC3-205ENST00000485407 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.06
NHLRC3-205ENST00000485407 FAM161AQ3B820 660 aa8.46□□□□□ -1.06
NHLRC3-205ENST00000485407 IFFO2Q5TF58 517 aa8.46□□□□□ -1.06
NHLRC3-205ENST00000485407 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
NHLRC3-205ENST00000485407 OATP04181 439 aa8.45□□□□□ -1.06
NHLRC3-205ENST00000485407 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
NHLRC3-205ENST00000485407 GLMNQ92990 594 aa8.45□□□□□ -1.06
NHLRC3-205ENST00000485407 KCTD12Q96CX2 325 aaKnown RBP8.45□□□□□ -1.06
NHLRC3-205ENST00000485407 MAP3K1Q13233 1512 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 ARHGEF40Q8TER5 1519 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 E9PSI1 815 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 COL9A1P20849 921 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 EPAS1Q99814 870 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 UHRF1BP1Q6BDS2 1440 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 FANCAO15360 1455 aa8.44□□□□□ -1.06
NHLRC3-205ENST00000485407 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 KCNA1Q09470 495 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 MTMR14Q8NCE2 650 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 NEO1Q92859 1461 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 FRMPD1Q5SYB0 1578 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 KIF14Q15058 1648 aa8.43□□□□□ -1.06
NHLRC3-205ENST00000485407 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
NHLRC3-205ENST00000485407 MTUS2Q5JR59 1369 aa8.42□□□□□ -1.06
NHLRC3-205ENST00000485407 PLCH2O75038 1416 aa8.42□□□□□ -1.06
NHLRC3-205ENST00000485407 FER1L4A9Z1Z3 1794 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 BRD1O95696 1058 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 TSR1Q2NL82 804 aaKnown RBP8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 PROX2Q3B8N5 592 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 C6orf132Q5T0Z8 1188 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 RIC3Q7Z5B4 369 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 RGS17Q9UGC6 210 aaPredicted RBP8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 LIMD1Q9UGP4 676 aa8.41□□□□□ -1.06
NHLRC3-205ENST00000485407 IGSF3O75054 1194 aa8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 RFX1P22670 979 aa8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 EFCAB2Q5VUJ9 269 aa8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 MRPL50Q8N5N7 158 aaKnown RBP8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 SETD1BQ9UPS6 1966 aaKnown RBP8.4□□□□□ -1.06
NHLRC3-205ENST00000485407 TIAM1Q13009 1591 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 CFAP74Q9C0B2 1584 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 EHBP1L1Q8N3D4 1523 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 AKNAQ7Z591 1439 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 ZNF335Q9H4Z2 1342 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 CEBPAP49715 358 aaPredicted RBP8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 MLECQ14165 292 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 NBPF3Q9H094 633 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 RABGEF1Q9UJ41 708 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 MYO5CQ9NQX4 1742 aa8.39□□□□□ -1.07
NHLRC3-205ENST00000485407 NCOA1Q15788 1441 aa8.38□□□□□ -1.07
NHLRC3-205ENST00000485407 PIP4K2BP78356 416 aa8.38□□□□□ -1.07
NHLRC3-205ENST00000485407 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
NHLRC3-205ENST00000485407 PXYLP1Q8TE99 480 aa8.38□□□□□ -1.07
NHLRC3-205ENST00000485407 USTQ9Y2C2 406 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms